RNA–Protein interactions for RNA: ENST00000630858.2

DDX3X-221, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-221ENST00000630858 KIF21BO75037 1637 aa13.91□□□□□ -0.18
DDX3X-221ENST00000630858 HIRIP3Q9BW71 556 aaPredicted RBP13.88□□□□□ -0.19
DDX3X-221ENST00000630858 IRX6P78412 446 aaPredicted RBP13.85□□□□□ -0.19
DDX3X-221ENST00000630858 CDK11AQ9UQ88 783 aaPredicted RBP13.85□□□□□ -0.19
DDX3X-221ENST00000630858 ANP32CO43423 234 aa13.85□□□□□ -0.19
DDX3X-221ENST00000630858 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
DDX3X-221ENST00000630858 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
DDX3X-221ENST00000630858 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
DDX3X-221ENST00000630858 SIN3AQ96ST3 1273 aa13.81□□□□□ -0.2
DDX3X-221ENST00000630858 PRKCSHP14314 528 aaPredicted RBP13.8□□□□□ -0.2
DDX3X-221ENST00000630858 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
DDX3X-221ENST00000630858 CCNB3Q8WWL7 1395 aa13.8□□□□□ -0.2
DDX3X-221ENST00000630858 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
DDX3X-221ENST00000630858 RAB3GAP2Q9H2M9 1393 aa13.79□□□□□ -0.2
DDX3X-221ENST00000630858 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
DDX3X-221ENST00000630858 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
DDX3X-221ENST00000630858 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
DDX3X-221ENST00000630858 RRBP1Q9P2E9 1410 aaKnown RBP13.78□□□□□ -0.2
DDX3X-221ENST00000630858 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.2
DDX3X-221ENST00000630858 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.21
DDX3X-221ENST00000630858 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
DDX3X-221ENST00000630858 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
DDX3X-221ENST00000630858 HNRNPUQ00839 825 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX3X-221ENST00000630858 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
DDX3X-221ENST00000630858 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
DDX3X-221ENST00000630858 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
DDX3X-221ENST00000630858 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
DDX3X-221ENST00000630858 MAPKBP1O60336 1514 aa13.72□□□□□ -0.21
DDX3X-221ENST00000630858 CUX2O14529 1486 aa13.72□□□□□ -0.21
DDX3X-221ENST00000630858 RAD54L2Q9Y4B4 1467 aa13.71□□□□□ -0.21
DDX3X-221ENST00000630858 NBR1Q14596 966 aa13.71□□□□□ -0.22
DDX3X-221ENST00000630858 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.22
DDX3X-221ENST00000630858 FAM50AQ14320 339 aaKnown RBP13.69□□□□□ -0.22
DDX3X-221ENST00000630858 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
DDX3X-221ENST00000630858 SETD5Q9C0A6 1442 aa13.66□□□□□ -0.22
DDX3X-221ENST00000630858 ABCA10Q8WWZ4 1543 aa13.66□□□□□ -0.22
DDX3X-221ENST00000630858 IGF1RP08069 1367 aa13.65□□□□□ -0.22
DDX3X-221ENST00000630858 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
DDX3X-221ENST00000630858 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
DDX3X-221ENST00000630858 B4GALNT3Q6L9W6 998 aa13.62□□□□□ -0.23
DDX3X-221ENST00000630858 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
DDX3X-221ENST00000630858 NOP58Q9Y2X3 529 aaKnown RBP13.6□□□□□ -0.23
DDX3X-221ENST00000630858 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
DDX3X-221ENST00000630858 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
DDX3X-221ENST00000630858 TIMELESSQ9UNS1 1208 aa13.58□□□□□ -0.24
DDX3X-221ENST00000630858 TONSLQ96HA7 1378 aa13.58□□□□□ -0.24
DDX3X-221ENST00000630858 WDR62O43379 1518 aa13.57□□□□□ -0.24
DDX3X-221ENST00000630858 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
DDX3X-221ENST00000630858 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
DDX3X-221ENST00000630858 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
DDX3X-221ENST00000630858 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
DDX3X-221ENST00000630858 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
DDX3X-221ENST00000630858 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
DDX3X-221ENST00000630858 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
DDX3X-221ENST00000630858 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
DDX3X-221ENST00000630858 ERICH6BQ5W0A0 696 aa13.53□□□□□ -0.24
DDX3X-221ENST00000630858 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.24
DDX3X-221ENST00000630858 PHLDB1Q86UU1 1377 aa13.52□□□□□ -0.25
DDX3X-221ENST00000630858 ARID3CA6NKF2 412 aa13.52□□□□□ -0.25
DDX3X-221ENST00000630858 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.25
DDX3X-221ENST00000630858 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
DDX3X-221ENST00000630858 CUL7Q14999 1698 aa13.49□□□□□ -0.25
DDX3X-221ENST00000630858 ANP32AP39687 249 aaKnown RBP13.49□□□□□ -0.25
DDX3X-221ENST00000630858 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
DDX3X-221ENST00000630858 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.255e-7■■■■□ 22.7
DDX3X-221ENST00000630858 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
DDX3X-221ENST00000630858 ZNF608Q9ULD9 1512 aaPredicted RBP13.47□□□□□ -0.25
DDX3X-221ENST00000630858 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.25
DDX3X-221ENST00000630858 TIAM1Q13009 1591 aa13.46□□□□□ -0.25
DDX3X-221ENST00000630858 IFT140Q96RY7 1462 aa13.46□□□□□ -0.26
DDX3X-221ENST00000630858 PBRM1Q86U86 1689 aa13.46□□□□□ -0.26
DDX3X-221ENST00000630858 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
DDX3X-221ENST00000630858 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
DDX3X-221ENST00000630858 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
DDX3X-221ENST00000630858 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
DDX3X-221ENST00000630858 IPO9Q96P70 1041 aaKnown RBP13.42□□□□□ -0.26
DDX3X-221ENST00000630858 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
DDX3X-221ENST00000630858 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
DDX3X-221ENST00000630858 CNGB1Q14028 1251 aaPredicted RBP13.42□□□□□ -0.26
DDX3X-221ENST00000630858 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.39□□□□□ -0.27
DDX3X-221ENST00000630858 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
DDX3X-221ENST00000630858 NPM2Q86SE8 214 aaKnown RBP13.39□□□□□ -0.27
DDX3X-221ENST00000630858 CTTNBP2Q8WZ74 1663 aa13.39□□□□□ -0.27
DDX3X-221ENST00000630858 GRIN2BQ13224 1484 aa13.38□□□□□ -0.27
DDX3X-221ENST00000630858 ZBED9Q6R2W3 1325 aa13.37□□□□□ -0.27
DDX3X-221ENST00000630858 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
DDX3X-221ENST00000630858 FHAD1B1AJZ9 1412 aa13.37□□□□□ -0.27
DDX3X-221ENST00000630858 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
DDX3X-221ENST00000630858 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDX3X-221ENST00000630858 MAP3K1Q13233 1512 aa13.35□□□□□ -0.27
DDX3X-221ENST00000630858 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
DDX3X-221ENST00000630858 CCDC18Q5T9S5 1454 aa13.35□□□□□ -0.27
DDX3X-221ENST00000630858 LAS1LQ9Y4W2 734 aaKnown RBP13.34□□□□□ -0.27
DDX3X-221ENST00000630858 AKNAQ7Z591 1439 aa13.33□□□□□ -0.28
DDX3X-221ENST00000630858 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
DDX3X-221ENST00000630858 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
DDX3X-221ENST00000630858 NEFMP07197 916 aa13.32□□□□□ -0.28
DDX3X-221ENST00000630858 FHOD3Q2V2M9 1422 aa13.31□□□□□ -0.28
DDX3X-221ENST00000630858 UACAQ9BZF9 1416 aa13.31□□□□□ -0.28
DDX3X-221ENST00000630858 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms