RNA–Protein interactions for RNA: ENST00000629886.2

UBE3A-219, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-219ENST00000629886 PCF11O94913 1555 aaKnown RBP9.29□□□□□ -0.92
UBE3A-219ENST00000629886 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
UBE3A-219ENST00000629886 PTPRMP28827 1452 aa9.27□□□□□ -0.93
UBE3A-219ENST00000629886 PRG4Q92954 1404 aaPredicted RBP9.26□□□□□ -0.93
UBE3A-219ENST00000629886 PPRC1Q5VV67 1664 aaKnown RBP9.26□□□□□ -0.93
UBE3A-219ENST00000629886 SHROOM2Q13796 1616 aa9.25□□□□□ -0.93
UBE3A-219ENST00000629886 WDR97A6NE52 1622 aa9.24□□□□□ -0.93
UBE3A-219ENST00000629886 ADCY10Q96PN6 1610 aa9.24□□□□□ -0.93
UBE3A-219ENST00000629886 NUP160Q12769 1436 aa9.22□□□□□ -0.93
UBE3A-219ENST00000629886 GRIN2AQ12879 1464 aa9.22□□□□□ -0.93
UBE3A-219ENST00000629886 JPH4Q96JJ6 628 aa9.2□□□□□ -0.94
UBE3A-219ENST00000629886 FGD5Q6ZNL6 1462 aa9.19□□□□□ -0.94
UBE3A-219ENST00000629886 PBRM1Q86U86 1689 aa9.16□□□□□ -0.94
UBE3A-219ENST00000629886 KIF21BO75037 1637 aa9.16□□□□□ -0.94
UBE3A-219ENST00000629886 TOP2AP11388 1531 aaKnown RBP9.15□□□□□ -0.94
UBE3A-219ENST00000629886 GLI2P10070 1586 aa9.14□□□□□ -0.95
UBE3A-219ENST00000629886 PLPPR3Q6T4P5 718 aa9.13□□□□□ -0.95
UBE3A-219ENST00000629886 CCDC88BA6NC98 1476 aa9.13□□□□□ -0.95
UBE3A-219ENST00000629886 ASXL2Q76L83 1435 aa9.13□□□□□ -0.95
UBE3A-219ENST00000629886 ADAMTSL3P82987 1691 aa9.12□□□□□ -0.95
UBE3A-219ENST00000629886 TEX14Q8IWB6 1497 aa9.11□□□□□ -0.95
UBE3A-219ENST00000629886 MED1Q15648 1581 aaPredicted RBP9.11□□□□□ -0.95
UBE3A-219ENST00000629886 PLB1Q6P1J6 1458 aa9.09□□□□□ -0.95
UBE3A-219ENST00000629886 PHF23Q9BUL5 403 aaPredicted RBP9.09□□□□□ -0.95
UBE3A-219ENST00000629886 TTBK1Q5TCY1 1321 aaPredicted RBP9.06□□□□□ -0.96
UBE3A-219ENST00000629886 ADAMTS12P58397 1594 aa9.06□□□□□ -0.96
UBE3A-219ENST00000629886 EPRSP07814 1512 aaKnown RBP9.05□□□□□ -0.96
UBE3A-219ENST00000629886 MADDQ8WXG6 1647 aa9.05□□□□□ -0.96
UBE3A-219ENST00000629886 MAP3K4Q9Y6R4 1608 aa9.05□□□□□ -0.96
UBE3A-219ENST00000629886 ABCA5Q8WWZ7 1642 aa9.05□□□□□ -0.96
UBE3A-219ENST00000629886 UBAP1LF5GYI3 381 aa9.04□□□□□ -0.96
UBE3A-219ENST00000629886 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
UBE3A-219ENST00000629886 ABCC2Q92887 1545 aa9.03□□□□□ -0.96
UBE3A-219ENST00000629886 FHAD1B1AJZ9 1412 aa9.03□□□□□ -0.96
UBE3A-219ENST00000629886 ARID4BQ4LE39 1312 aaPredicted RBP9.03□□□□□ -0.96
UBE3A-219ENST00000629886 CUX1P39880 1505 aa9.02□□□□□ -0.97
UBE3A-219ENST00000629886 HSPA1LP34931 641 aa9.02□□□□□ -0.97
UBE3A-219ENST00000629886 CHIC1Q5VXU3 224 aa9.02□□□□□ -0.97
UBE3A-219ENST00000629886 YEATS2Q9ULM3 1422 aa9.02□□□□□ -0.97
UBE3A-219ENST00000629886 SRCAPQ6ZRS2 3230 aa9.01□□□□□ -0.97
UBE3A-219ENST00000629886 LTBP4Q8N2S1 1624 aa9□□□□□ -0.97
UBE3A-219ENST00000629886 ABCA10Q8WWZ4 1543 aa9□□□□□ -0.97
UBE3A-219ENST00000629886 IQSEC2Q5JU85 1478 aa8.99□□□□□ -0.97
UBE3A-219ENST00000629886 BCORL1Q5H9F3 1711 aa8.99□□□□□ -0.97
UBE3A-219ENST00000629886 KIAA0586Q9BVV6 1533 aa8.99□□□□□ -0.97
UBE3A-219ENST00000629886 PTPRGP23470 1445 aa8.98□□□□□ -0.97
UBE3A-219ENST00000629886 RIMS1Q86UR5 1692 aaKnown RBP8.98□□□□□ -0.97
UBE3A-219ENST00000629886 STRCQ7RTU9 1775 aa8.96□□□□□ -0.98
UBE3A-219ENST00000629886 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
UBE3A-219ENST00000629886 RGS17Q9UGC6 210 aaPredicted RBP8.95□□□□□ -0.98
UBE3A-219ENST00000629886 SCAF1Q9H7N4 1312 aaKnown RBP8.95□□□□□ -0.98
UBE3A-219ENST00000629886 CUL7Q14999 1698 aa8.94□□□□□ -0.98
UBE3A-219ENST00000629886 PTPRTO14522 1441 aa8.93□□□□□ -0.98
UBE3A-219ENST00000629886 CD109Q6YHK3 1445 aa8.93□□□□□ -0.98
UBE3A-219ENST00000629886 MAGI3Q5TCQ9 1506 aa8.92□□□□□ -0.98
UBE3A-219ENST00000629886 PIP4K2BP78356 416 aa8.92□□□□□ -0.98
UBE3A-219ENST00000629886 RAPGEF3O95398 923 aa8.91□□□□□ -0.98
UBE3A-219ENST00000629886 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
UBE3A-219ENST00000629886 ARAP3Q8WWN8 1544 aa8.88□□□□□ -0.99
UBE3A-219ENST00000629886 UHRF1BP1LA0JNW5 1464 aa8.88□□□□□ -0.99
UBE3A-219ENST00000629886 CFAP43Q8NDM7 1665 aa8.87□□□□□ -0.99
UBE3A-219ENST00000629886 UACAQ9BZF9 1416 aa8.87□□□□□ -0.99
UBE3A-219ENST00000629886 TNIKQ9UKE5 1360 aa8.86□□□□□ -0.99
UBE3A-219ENST00000629886 ZNF335Q9H4Z2 1342 aaPredicted RBP8.86□□□□□ -0.99
UBE3A-219ENST00000629886 CEBPAP49715 358 aaPredicted RBP8.86□□□□□ -0.99
UBE3A-219ENST00000629886 POTEAQ6S8J7 498 aa8.86□□□□□ -0.99
UBE3A-219ENST00000629886 KDM5BQ9UGL1 1544 aa8.85□□□□□ -0.99
UBE3A-219ENST00000629886 MLECQ14165 292 aa8.85□□□□□ -0.99
UBE3A-219ENST00000629886 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
UBE3A-219ENST00000629886 WDR7Q9Y4E6 1490 aa8.84□□□□□ -0.99
UBE3A-219ENST00000629886 IFFO2Q5TF58 517 aa8.84□□□□□ -0.99
UBE3A-219ENST00000629886 SENP3Q9H4L4 574 aaPredicted RBP8.84□□□□□ -0.99
UBE3A-219ENST00000629886 PREX1Q8TCU6 1659 aa8.82□□□□□ -1
UBE3A-219ENST00000629886 ZCCHC11Q5TAX3 1644 aaKnown RBP8.82□□□□□ -1
UBE3A-219ENST00000629886 UPF1Q92900 1129 aaKnown RBP eCLIP8.81□□□□□ -1
UBE3A-219ENST00000629886 UHRF1BP1Q6BDS2 1440 aa8.8□□□□□ -1
UBE3A-219ENST00000629886 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -15e-6■■■■■ 29.2
UBE3A-219ENST00000629886 TOM1O60784 492 aa8.79□□□□□ -1
UBE3A-219ENST00000629886 POGZQ7Z3K3 1410 aa8.79□□□□□ -1
UBE3A-219ENST00000629886 SETD1AO15047 1707 aaKnown RBP8.78□□□□□ -1
UBE3A-219ENST00000629886 CARMIL2Q6F5E8 1435 aa8.78□□□□□ -1
UBE3A-219ENST00000629886 TTC37Q6PGP7 1564 aa8.78□□□□□ -1
UBE3A-219ENST00000629886 FRMPD1Q5SYB0 1578 aa8.75□□□□□ -1.01
UBE3A-219ENST00000629886 NCOA1Q15788 1441 aa8.75□□□□□ -1.01
UBE3A-219ENST00000629886 FANCAO15360 1455 aa8.75□□□□□ -1.01
UBE3A-219ENST00000629886 NCKAP5LQ9HCH0 1330 aa8.74□□□□□ -1.01
UBE3A-219ENST00000629886 SIGLEC1Q9BZZ2 1709 aa8.73□□□□□ -1.01
UBE3A-219ENST00000629886 ARHGEF40Q8TER5 1519 aa8.73□□□□□ -1.01
UBE3A-219ENST00000629886 FER1L4A9Z1Z3 1794 aa8.73□□□□□ -1.01
UBE3A-219ENST00000629886 PHLDB1Q86UU1 1377 aa8.73□□□□□ -1.01
UBE3A-219ENST00000629886 AKNAQ7Z591 1439 aa8.7□□□□□ -1.02
UBE3A-219ENST00000629886 KIAA0556O60303 1618 aa8.67□□□□□ -1.02
UBE3A-219ENST00000629886 DISP1Q96F81 1524 aa8.67□□□□□ -1.02
UBE3A-219ENST00000629886 ARHGEF12Q9NZN5 1544 aa8.67□□□□□ -1.02
UBE3A-219ENST00000629886 CAMSAP1Q5T5Y3 1602 aa8.65□□□□□ -1.02
UBE3A-219ENST00000629886 ALKQ9UM73 1620 aa8.65□□□□□ -1.02
UBE3A-219ENST00000629886 NEO1Q92859 1461 aa8.65□□□□□ -1.02
UBE3A-219ENST00000629886 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
UBE3A-219ENST00000629886 RBM33Q96EV2 1170 aaKnown RBP8.64□□□□□ -1.03
UBE3A-219ENST00000629886 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms