RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 PPM1GO15355 546 aaPredicted RBP11.66□□□□□ -0.54
GABRB3-216ENST00000628124 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
GABRB3-216ENST00000628124 CFAP53Q96M91 514 aa11.65□□□□□ -0.54
GABRB3-216ENST00000628124 CHMP4BQ9H444 224 aaKnown RBP11.65□□□□□ -0.54
GABRB3-216ENST00000628124 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
GABRB3-216ENST00000628124 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
GABRB3-216ENST00000628124 HAP1P54257 671 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-216ENST00000628124 C14orf37Q86TY3 774 aa11.63□□□□□ -0.55
GABRB3-216ENST00000628124 CHAF1AQ13111 956 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-216ENST00000628124 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
GABRB3-216ENST00000628124 ZBTB7CA1YPR0 619 aa11.62□□□□□ -0.55
GABRB3-216ENST00000628124 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
GABRB3-216ENST00000628124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
GABRB3-216ENST00000628124 NAP1L5Q96NT1 182 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-216ENST00000628124 FGD1P98174 961 aa11.59□□□□□ -0.55
GABRB3-216ENST00000628124 CDCA8Q53HL2 280 aa11.59□□□□□ -0.55
GABRB3-216ENST00000628124 NPHP1O15259 732 aa11.58□□□□□ -0.56
GABRB3-216ENST00000628124 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
GABRB3-216ENST00000628124 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
GABRB3-216ENST00000628124 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
GABRB3-216ENST00000628124 GOLGA6L4A6NEF3 574 aa11.57□□□□□ -0.56
GABRB3-216ENST00000628124 MS4A1P11836 297 aa11.56□□□□□ -0.56
GABRB3-216ENST00000628124 PNNQ9H307 717 aaKnown RBP11.56□□□□□ -0.56
GABRB3-216ENST00000628124 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
GABRB3-216ENST00000628124 EIF4G2P78344 907 aaKnown RBP eCLIP11.54□□□□□ -0.56
GABRB3-216ENST00000628124 KIAA2012Q0VF49 1180 aa11.54□□□□□ -0.56
GABRB3-216ENST00000628124 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
GABRB3-216ENST00000628124 CLSTN1O94985 981 aa11.54□□□□□ -0.56
GABRB3-216ENST00000628124 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
GABRB3-216ENST00000628124 KCNJ4P48050 445 aa11.53□□□□□ -0.56
GABRB3-216ENST00000628124 NUDCQ9Y266 331 aa11.52□□□□□ -0.56
GABRB3-216ENST00000628124 MAPK8IP3Q9UPT6 1336 aa11.52□□□□□ -0.57
GABRB3-216ENST00000628124 OS9Q13438 667 aaPredicted RBP11.51□□□□□ -0.57
GABRB3-216ENST00000628124 HSP90AB1P08238 724 aaKnown RBP11.51□□□□□ -0.57
GABRB3-216ENST00000628124 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
GABRB3-216ENST00000628124 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
GABRB3-216ENST00000628124 MSNP26038 577 aaKnown RBP11.49□□□□□ -0.57
GABRB3-216ENST00000628124 MCCP23508 829 aa11.48□□□□□ -0.57
GABRB3-216ENST00000628124 KNSTRNQ9Y448 316 aa11.48□□□□□ -0.57
GABRB3-216ENST00000628124 CHIC2Q9UKJ5 165 aa11.48□□□□□ -0.57
GABRB3-216ENST00000628124 USP35Q9P2H5 1018 aa11.48□□□□□ -0.57
GABRB3-216ENST00000628124 NAP1L2Q9ULW6 460 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-216ENST00000628124 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
GABRB3-216ENST00000628124 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.57
GABRB3-216ENST00000628124 IRX6P78412 446 aaPredicted RBP11.45□□□□□ -0.58
GABRB3-216ENST00000628124 DRC7Q8IY82 874 aa11.45□□□□□ -0.58
GABRB3-216ENST00000628124 PTMSP20962 102 aa11.44□□□□□ -0.58
GABRB3-216ENST00000628124 HSCBQ8IWL3 235 aa11.44□□□□□ -0.58
GABRB3-216ENST00000628124 MTUS2Q5JR59 1369 aa11.44□□□□□ -0.58
GABRB3-216ENST00000628124 HTATSF1O43719 755 aaKnown RBP11.43□□□□□ -0.58
GABRB3-216ENST00000628124 PRM3Q9NNZ6 103 aa11.43□□□□□ -0.58
GABRB3-216ENST00000628124 TAOK2Q9UL54 1235 aa11.43□□□□□ -0.58
GABRB3-216ENST00000628124 GNL2Q13823 731 aaKnown RBP11.42□□□□□ -0.58
GABRB3-216ENST00000628124 CCDC34Q96HJ3 373 aa11.42□□□□□ -0.58
GABRB3-216ENST00000628124 LAS1LQ9Y4W2 734 aaKnown RBP11.41□□□□□ -0.58
GABRB3-216ENST00000628124 TNNT3P45378 269 aaPredicted RBP11.4□□□□□ -0.58
GABRB3-216ENST00000628124 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
GABRB3-216ENST00000628124 GOLGA6L1Q8N7Z2 621 aa11.39□□□□□ -0.59
GABRB3-216ENST00000628124 TPM4P67936 248 aa11.39□□□□□ -0.59
GABRB3-216ENST00000628124 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
GABRB3-216ENST00000628124 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
GABRB3-216ENST00000628124 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
GABRB3-216ENST00000628124 RGS3P49796 1198 aa11.36□□□□□ -0.59
GABRB3-216ENST00000628124 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
GABRB3-216ENST00000628124 ARID4BQ4LE39 1312 aaPredicted RBP11.36□□□□□ -0.59
GABRB3-216ENST00000628124 POGKQ9P215 609 aa11.36□□□□□ -0.59
GABRB3-216ENST00000628124 FRAT1Q92837 279 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-216ENST00000628124 ABCC9O60706 1549 aa11.35□□□□□ -0.59
GABRB3-216ENST00000628124 SYAP1Q96A49 352 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-216ENST00000628124 CEP89Q96ST8 783 aa11.35□□□□□ -0.59
GABRB3-216ENST00000628124 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
GABRB3-216ENST00000628124 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-216ENST00000628124 KIAA1211Q6ZU35 1233 aa11.34□□□□□ -0.59
GABRB3-216ENST00000628124 NEUROD2Q15784 382 aa11.34□□□□□ -0.59
GABRB3-216ENST00000628124 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-216ENST00000628124 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-216ENST00000628124 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
GABRB3-216ENST00000628124 PLEKHD1A6NEE1 506 aa11.33□□□□□ -0.6
GABRB3-216ENST00000628124 HDGFP51858 240 aaKnown RBP11.32□□□□□ -0.6
GABRB3-216ENST00000628124 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
GABRB3-216ENST00000628124 RGL3Q3MIN7 710 aa11.3□□□□□ -0.6
GABRB3-216ENST00000628124 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-216ENST00000628124 SETQ01105 290 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-216ENST00000628124 U2SURPO15042 1029 aaKnown RBP11.29□□□□□ -0.6
GABRB3-216ENST00000628124 MIER1Q8N108 512 aa11.29□□□□□ -0.6
GABRB3-216ENST00000628124 RTN4Q9NQC3 1192 aaKnown RBP11.29□□□□□ -0.6
GABRB3-216ENST00000628124 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
GABRB3-216ENST00000628124 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
GABRB3-216ENST00000628124 TPM3P06753 285 aa11.28□□□□□ -0.6
GABRB3-216ENST00000628124 SUPT16HQ9Y5B9 1047 aaKnown RBP11.28□□□□□ -0.6
GABRB3-216ENST00000628124 IPO8O15397 1037 aaKnown RBP11.27□□□□□ -0.6
GABRB3-216ENST00000628124 RTF1Q92541 710 aaKnown RBP11.27□□□□□ -0.61
GABRB3-216ENST00000628124 RRP7BPQ9NSQ0 103 aa11.27□□□□□ -0.61
GABRB3-216ENST00000628124 CALD1Q05682 793 aaKnown RBP11.26□□□□□ -0.61
GABRB3-216ENST00000628124 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
GABRB3-216ENST00000628124 SENP3Q9H4L4 574 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-216ENST00000628124 CALRP27797 417 aaKnown RBP11.24□□□□□ -0.61
GABRB3-216ENST00000628124 HIRIP3Q9BW71 556 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-216ENST00000628124 RASSF8Q8NHQ8 419 aa11.23□□□□□ -0.61
GABRB3-216ENST00000628124 GPATCH3Q96I76 525 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms