RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
SRGAP2-217ENST00000624873 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
SRGAP2-217ENST00000624873 RRP7BPQ9NSQ0 103 aa14.23□□□□□ -0.13
SRGAP2-217ENST00000624873 JPH4Q96JJ6 628 aa14.21□□□□□ -0.13
SRGAP2-217ENST00000624873 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
SRGAP2-217ENST00000624873 CCNB3Q8WWL7 1395 aa14.21□□□□□ -0.13
SRGAP2-217ENST00000624873 NEFMP07197 916 aa14.19□□□□□ -0.14
SRGAP2-217ENST00000624873 PPP1R15AO75807 674 aaPredicted RBP14.19□□□□□ -0.14
SRGAP2-217ENST00000624873 RAPGEF2Q9Y4G8 1499 aa14.16□□□□□ -0.14
SRGAP2-217ENST00000624873 ANP32CO43423 234 aa14.16□□□□□ -0.14
SRGAP2-217ENST00000624873 DIEXFQ68CQ4 756 aaKnown RBP14.14□□□□□ -0.15
SRGAP2-217ENST00000624873 FMN1Q68DA7 1419 aa14.14□□□□□ -0.15
SRGAP2-217ENST00000624873 EFCAB2Q5VUJ9 269 aa14.12□□□□□ -0.15
SRGAP2-217ENST00000624873 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
SRGAP2-217ENST00000624873 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
SRGAP2-217ENST00000624873 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
SRGAP2-217ENST00000624873 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
SRGAP2-217ENST00000624873 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
SRGAP2-217ENST00000624873 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
SRGAP2-217ENST00000624873 C14orf37Q86TY3 774 aa14.07□□□□□ -0.16
SRGAP2-217ENST00000624873 CFTRP13569 1480 aa14.06□□□□□ -0.16
SRGAP2-217ENST00000624873 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
SRGAP2-217ENST00000624873 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
SRGAP2-217ENST00000624873 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
SRGAP2-217ENST00000624873 PTPRGP23470 1445 aa14.05□□□□□ -0.16
SRGAP2-217ENST00000624873 MLECQ14165 292 aa14.05□□□□□ -0.16
SRGAP2-217ENST00000624873 KANK1Q14678 1352 aa14.04□□□□□ -0.16
SRGAP2-217ENST00000624873 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
SRGAP2-217ENST00000624873 NESP48681 1621 aa14.03□□□□□ -0.16
SRGAP2-217ENST00000624873 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
SRGAP2-217ENST00000624873 RGL3Q3MIN7 710 aa14.02□□□□□ -0.16
SRGAP2-217ENST00000624873 VPS8Q8N3P4 1428 aa14.02□□□□□ -0.17
SRGAP2-217ENST00000624873 ERICH6Q7L0X2 663 aa14.01□□□□□ -0.17
SRGAP2-217ENST00000624873 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
SRGAP2-217ENST00000624873 AQRO60306 1485 aaKnown RBP eCLIP14□□□□□ -0.172e-8■■■■■ 37.2
SRGAP2-217ENST00000624873 GGT6Q6P531 493 aa13.98□□□□□ -0.17
SRGAP2-217ENST00000624873 IGF1RP08069 1367 aa13.97□□□□□ -0.17
SRGAP2-217ENST00000624873 SENP3Q9H4L4 574 aaPredicted RBP13.97□□□□□ -0.17
SRGAP2-217ENST00000624873 FHOD3Q2V2M9 1422 aa13.97□□□□□ -0.17
SRGAP2-217ENST00000624873 GRIN2BQ13224 1484 aa13.96□□□□□ -0.17
SRGAP2-217ENST00000624873 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.17
SRGAP2-217ENST00000624873 RSPH4AQ5TD94 716 aa13.96□□□□□ -0.17
SRGAP2-217ENST00000624873 IFT140Q96RY7 1462 aa13.96□□□□□ -0.18
SRGAP2-217ENST00000624873 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
SRGAP2-217ENST00000624873 CCDC18Q5T9S5 1454 aa13.92□□□□□ -0.18
SRGAP2-217ENST00000624873 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
SRGAP2-217ENST00000624873 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
SRGAP2-217ENST00000624873 CDCA8Q53HL2 280 aa13.89□□□□□ -0.19
SRGAP2-217ENST00000624873 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
SRGAP2-217ENST00000624873 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
SRGAP2-217ENST00000624873 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
SRGAP2-217ENST00000624873 KANK4Q5T7N3 995 aaPredicted RBP13.88□□□□□ -0.19
SRGAP2-217ENST00000624873 ANKRD30AQ9BXX3 1397 aa13.88□□□□□ -0.19
SRGAP2-217ENST00000624873 RUSC2Q8N2Y8 1516 aa13.87□□□□□ -0.19
SRGAP2-217ENST00000624873 POGKQ9P215 609 aa13.87□□□□□ -0.19
SRGAP2-217ENST00000624873 HAP1P54257 671 aaPredicted RBP13.87□□□□□ -0.19
SRGAP2-217ENST00000624873 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
SRGAP2-217ENST00000624873 KIF3BO15066 747 aa13.86□□□□□ -0.19
SRGAP2-217ENST00000624873 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
SRGAP2-217ENST00000624873 TMC1Q8TDI8 760 aa13.86□□□□□ -0.19
SRGAP2-217ENST00000624873 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
SRGAP2-217ENST00000624873 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
SRGAP2-217ENST00000624873 FAM69CQ0P6D2 419 aa13.85□□□□□ -0.19
SRGAP2-217ENST00000624873 DDX10Q13206 875 aaKnown RBP13.83□□□□□ -0.19
SRGAP2-217ENST00000624873 CARD11Q9BXL7 1154 aa13.82□□□□□ -0.2
SRGAP2-217ENST00000624873 POLA1P09884 1462 aaPredicted RBP13.82□□□□□ -0.2
SRGAP2-217ENST00000624873 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
SRGAP2-217ENST00000624873 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
SRGAP2-217ENST00000624873 ZBTB7CA1YPR0 619 aa13.79□□□□□ -0.2
SRGAP2-217ENST00000624873 WASHC2CQ9Y4E1 1318 aa13.79□□□□□ -0.2
SRGAP2-217ENST00000624873 PKD2Q13563 968 aa13.79□□□□□ -0.2
SRGAP2-217ENST00000624873 NUP155O75694 1391 aa13.78□□□□□ -0.2
SRGAP2-217ENST00000624873 PRG4Q92954 1404 aaPredicted RBP13.78□□□□□ -0.2
SRGAP2-217ENST00000624873 WDR43Q15061 677 aaKnown RBP eCLIP13.77□□□□□ -0.2
SRGAP2-217ENST00000624873 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
SRGAP2-217ENST00000624873 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
SRGAP2-217ENST00000624873 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
SRGAP2-217ENST00000624873 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
SRGAP2-217ENST00000624873 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
SRGAP2-217ENST00000624873 A0A0G2JS52 829 aa13.74□□□□□ -0.21
SRGAP2-217ENST00000624873 EID1Q9Y6B2 187 aa13.74□□□□□ -0.21
SRGAP2-217ENST00000624873 CUX1P39880 1505 aa13.73□□□□□ -0.21
SRGAP2-217ENST00000624873 NPM2Q86SE8 214 aaKnown RBP13.72□□□□□ -0.21
SRGAP2-217ENST00000624873 SIN3AQ96ST3 1273 aa13.72□□□□□ -0.21
SRGAP2-217ENST00000624873 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
SRGAP2-217ENST00000624873 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.21
SRGAP2-217ENST00000624873 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.21
SRGAP2-217ENST00000624873 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
SRGAP2-217ENST00000624873 TOP2BQ02880 1626 aa13.71□□□□□ -0.21
SRGAP2-217ENST00000624873 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
SRGAP2-217ENST00000624873 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.22
SRGAP2-217ENST00000624873 CFAP53Q96M91 514 aa13.71□□□□□ -0.22
SRGAP2-217ENST00000624873 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
SRGAP2-217ENST00000624873 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
SRGAP2-217ENST00000624873 MRS2Q9HD23 443 aa13.67□□□□□ -0.22
SRGAP2-217ENST00000624873 TMF1P82094 1093 aa13.66□□□□□ -0.22
SRGAP2-217ENST00000624873 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
SRGAP2-217ENST00000624873 SRPK2P78362 688 aaKnown RBP13.65□□□□□ -0.22
SRGAP2-217ENST00000624873 AEBP2Q6ZN18 517 aaPredicted RBP13.65□□□□□ -0.22
SRGAP2-217ENST00000624873 STK26Q9P289 416 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms