RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-223ENST00000622098 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
CDK16-223ENST00000622098 ATP1B4Q9UN42 357 aaPredicted RBP25.67■■□□□ 1.7
CDK16-223ENST00000622098 MAPKBP1O60336 1514 aa25.67■■□□□ 1.7
CDK16-223ENST00000622098 FAM50AQ14320 339 aaKnown RBP25.66■■□□□ 1.7
CDK16-223ENST00000622098 SETD5Q9C0A6 1442 aa25.66■■□□□ 1.7
CDK16-223ENST00000622098 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
CDK16-223ENST00000622098 PCF11O94913 1555 aaKnown RBP25.62■■□□□ 1.69
CDK16-223ENST00000622098 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
CDK16-223ENST00000622098 FHOD3Q2V2M9 1422 aa25.58■■□□□ 1.69
CDK16-223ENST00000622098 CFAP43Q8NDM7 1665 aa25.58■■□□□ 1.68
CDK16-223ENST00000622098 DNMBPQ6XZF7 1577 aa25.55■■□□□ 1.68
CDK16-223ENST00000622098 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
CDK16-223ENST00000622098 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
CDK16-223ENST00000622098 SIN3AQ96ST3 1273 aa25.53■■□□□ 1.68
CDK16-223ENST00000622098 TOPBP1Q92547 1522 aa25.52■■□□□ 1.68
CDK16-223ENST00000622098 FYCO1Q9BQS8 1478 aa25.48■■□□□ 1.67
CDK16-223ENST00000622098 NESP48681 1621 aa25.47■■□□□ 1.67
CDK16-223ENST00000622098 EFCAB5A4FU69 1503 aa25.47■■□□□ 1.67
CDK16-223ENST00000622098 CASKIN1Q8WXD9 1431 aa25.46■■□□□ 1.67
CDK16-223ENST00000622098 WDR97A6NE52 1622 aa25.45■■□□□ 1.66
CDK16-223ENST00000622098 SUPT16HQ9Y5B9 1047 aaKnown RBP25.42■■□□□ 1.66
CDK16-223ENST00000622098 KCNH8Q96L42 1107 aa25.42■■□□□ 1.66
CDK16-223ENST00000622098 CUL7Q14999 1698 aa25.42■■□□□ 1.66
CDK16-223ENST00000622098 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.663e-7■■■■■ 33.1
CDK16-223ENST00000622098 CTTNBP2Q8WZ74 1663 aa25.38■■□□□ 1.65
CDK16-223ENST00000622098 DDX10Q13206 875 aaKnown RBP25.37■■□□□ 1.65
CDK16-223ENST00000622098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.36■■□□□ 1.65
CDK16-223ENST00000622098 FMN1Q68DA7 1419 aa25.36■■□□□ 1.65
CDK16-223ENST00000622098 TIMELESSQ9UNS1 1208 aa25.34■■□□□ 1.65
CDK16-223ENST00000622098 FGD6Q6ZV73 1430 aa25.32■■□□□ 1.64
CDK16-223ENST00000622098 MTUS2Q5JR59 1369 aa25.31■■□□□ 1.64
CDK16-223ENST00000622098 SNAPC4Q5SXM2 1469 aa25.3■■□□□ 1.64
CDK16-223ENST00000622098 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
CDK16-223ENST00000622098 URB2Q14146 1524 aaKnown RBP25.29■■□□□ 1.64
CDK16-223ENST00000622098 HIRIP3Q9BW71 556 aaPredicted RBP25.29■■□□□ 1.64
CDK16-223ENST00000622098 PPP1R15AO75807 674 aaPredicted RBP25.28■■□□□ 1.64
CDK16-223ENST00000622098 CCDC18Q5T9S5 1454 aa25.22■■□□□ 1.63
CDK16-223ENST00000622098 PTPRKQ15262 1439 aa25.21■■□□□ 1.63
CDK16-223ENST00000622098 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
CDK16-223ENST00000622098 GAPVD1Q14C86 1478 aa25.2■■□□□ 1.62
CDK16-223ENST00000622098 SAMD9Q5K651 1589 aa25.19■■□□□ 1.62
CDK16-223ENST00000622098 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
CDK16-223ENST00000622098 TONSLQ96HA7 1378 aa25.18■■□□□ 1.62
CDK16-223ENST00000622098 HFM1A2PYH4 1435 aa25.18■■□□□ 1.62
CDK16-223ENST00000622098 MYT1Q01538 1121 aa25.17■■□□□ 1.62
CDK16-223ENST00000622098 NCOA2Q15596 1464 aa25.17■■□□□ 1.62
CDK16-223ENST00000622098 LRRIQ1Q96JM4 1722 aa25.16■■□□□ 1.62
CDK16-223ENST00000622098 UACAQ9BZF9 1416 aa25.15■■□□□ 1.62
CDK16-223ENST00000622098 MYOM3Q5VTT5 1437 aa25.14■■□□□ 1.62
CDK16-223ENST00000622098 GRIN2BQ13224 1484 aa25.14■■□□□ 1.62
CDK16-223ENST00000622098 PTPN23Q9H3S7 1636 aa25.14■■□□□ 1.61
CDK16-223ENST00000622098 NAIPQ13075 1403 aa25.11■■□□□ 1.61
CDK16-223ENST00000622098 PDS5BQ9NTI5 1447 aa25.09■■□□□ 1.61
CDK16-223ENST00000622098 ANP32CO43423 234 aa25.09■■□□□ 1.61
CDK16-223ENST00000622098 SUPT6HQ7KZ85 1726 aaKnown RBP25.08■■□□□ 1.61
CDK16-223ENST00000622098 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
CDK16-223ENST00000622098 EHBP1L1Q8N3D4 1523 aa25.06■■□□□ 1.6
CDK16-223ENST00000622098 CCER2I3L3R5 266 aa25.04■■□□□ 1.6
CDK16-223ENST00000622098 DNAJC5BQ9UF47 199 aa25.04■■□□□ 1.6
CDK16-223ENST00000622098 BCANQ96GW7 911 aa25.02■■□□□ 1.6
CDK16-223ENST00000622098 MAGI3Q5TCQ9 1506 aa25.01■■□□□ 1.59
CDK16-223ENST00000622098 UGGT2Q9NYU1 1516 aa25.01■■□□□ 1.59
CDK16-223ENST00000622098 TRIM52Q96A61 297 aa25■■□□□ 1.59
CDK16-223ENST00000622098 TSHZ2Q9NRE2 1034 aa25■■□□□ 1.59
CDK16-223ENST00000622098 RRP7BPQ9NSQ0 103 aa25■■□□□ 1.59
CDK16-223ENST00000622098 FKBP8Q14318 412 aa24.99■■□□□ 1.59
CDK16-223ENST00000622098 CHIC2Q9UKJ5 165 aa24.99■■□□□ 1.59
CDK16-223ENST00000622098 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
CDK16-223ENST00000622098 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
CDK16-223ENST00000622098 TARBP1Q13395 1621 aaKnown RBP24.95■■□□□ 1.58
CDK16-223ENST00000622098 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
CDK16-223ENST00000622098 ARID3CA6NKF2 412 aa24.9■■□□□ 1.58
CDK16-223ENST00000622098 HECW1Q76N89 1606 aa24.89■■□□□ 1.58
CDK16-223ENST00000622098 TCOF1Q13428 1488 aaKnown RBP24.89■■□□□ 1.58
CDK16-223ENST00000622098 EPRSP07814 1512 aaKnown RBP24.88■■□□□ 1.57
CDK16-223ENST00000622098 NEFLP07196 543 aa24.87■■□□□ 1.57
CDK16-223ENST00000622098 IQGAP2Q13576 1575 aa24.87■■□□□ 1.57
CDK16-223ENST00000622098 CDK13Q14004 1512 aaKnown RBP24.85■■□□□ 1.57
CDK16-223ENST00000622098 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
CDK16-223ENST00000622098 DENND4BO75064 1496 aaPredicted RBP24.84■■□□□ 1.57
CDK16-223ENST00000622098 GCC2Q8IWJ2 1684 aa24.84■■□□□ 1.57
CDK16-223ENST00000622098 KDM6BO15054 1643 aa24.82■■□□□ 1.56
CDK16-223ENST00000622098 HSPA5P11021 654 aaKnown RBP24.81■■□□□ 1.56
CDK16-223ENST00000622098 AKNAQ7Z591 1439 aa24.8■■□□□ 1.56
CDK16-223ENST00000622098 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
CDK16-223ENST00000622098 MPHOSPH9Q99550 1183 aa24.79■■□□□ 1.56
CDK16-223ENST00000622098 MIA2Q96PC5 1412 aa24.79■■□□□ 1.56
CDK16-223ENST00000622098 WASHC2AQ641Q2 1341 aa24.78■■□□□ 1.56
CDK16-223ENST00000622098 WDR62O43379 1518 aa24.77■■□□□ 1.56
CDK16-223ENST00000622098 FOXD1Q16676 465 aa24.76■■□□□ 1.55
CDK16-223ENST00000622098 EIF4G2P78344 907 aaKnown RBP eCLIP24.73■■□□□ 1.554e-7■■■□□ 16.6
CDK16-223ENST00000622098 L3MBTL2Q969R5 705 aa24.72■■□□□ 1.55
CDK16-223ENST00000622098 HNRNPUQ00839 825 aaKnown RBP eCLIP24.71■■□□□ 1.55
CDK16-223ENST00000622098 MRC2Q9UBG0 1479 aa24.68■■□□□ 1.54
CDK16-223ENST00000622098 DAPK1P53355 1430 aa24.66■■□□□ 1.54
CDK16-223ENST00000622098 ZNF644Q9H582 1327 aaPredicted RBP24.65■■□□□ 1.54
CDK16-223ENST00000622098 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.53
CDK16-223ENST00000622098 ROCK1Q13464 1354 aa24.62■■□□□ 1.53
CDK16-223ENST00000622098 ABCC5O15440 1437 aa24.61■■□□□ 1.53
CDK16-223ENST00000622098 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms