RNA–Protein interactions for RNA: ENST00000621161.4

RAB11FIP4-211, Transcript of RAB11 family interacting protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP4, Length 8,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-211ENST00000621161 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.74
RAB11FIP4-211ENST00000621161 TONSLQ96HA7 1378 aa25.89■■□□□ 1.73
RAB11FIP4-211ENST00000621161 DCAF1Q9Y4B6 1507 aa25.84■■□□□ 1.73
RAB11FIP4-211ENST00000621161 MSNP26038 577 aaKnown RBP25.83■■□□□ 1.73
RAB11FIP4-211ENST00000621161 PPM1GO15355 546 aaPredicted RBP25.83■■□□□ 1.73
RAB11FIP4-211ENST00000621161 CHGAP10645 457 aaKnown RBP25.83■■□□□ 1.73
RAB11FIP4-211ENST00000621161 SETQ01105 290 aaPredicted RBP25.83■■□□□ 1.72
RAB11FIP4-211ENST00000621161 NOC3LQ8WTT2 800 aaKnown RBP25.82■■□□□ 1.72
RAB11FIP4-211ENST00000621161 CLSTN1O94985 981 aa25.8■■□□□ 1.72
RAB11FIP4-211ENST00000621161 KIAA2012Q0VF49 1180 aa25.8■■□□□ 1.72
RAB11FIP4-211ENST00000621161 RTN4Q9NQC3 1192 aaKnown RBP25.78■■□□□ 1.72
RAB11FIP4-211ENST00000621161 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
RAB11FIP4-211ENST00000621161 PNNQ9H307 717 aaKnown RBP25.76■■□□□ 1.71
RAB11FIP4-211ENST00000621161 FBLN2P98095 1184 aa25.74■■□□□ 1.71
RAB11FIP4-211ENST00000621161 PRM3Q9NNZ6 103 aa25.71■■□□□ 1.71
RAB11FIP4-211ENST00000621161 DRC7Q8IY82 874 aa25.7■■□□□ 1.71
RAB11FIP4-211ENST00000621161 ZNF777Q9ULD5 760 aaPredicted RBP25.7■■□□□ 1.71
RAB11FIP4-211ENST00000621161 FGD1P98174 961 aa25.69■■□□□ 1.7
RAB11FIP4-211ENST00000621161 GOLGA6L4A6NEF3 574 aa25.68■■□□□ 1.7
RAB11FIP4-211ENST00000621161 USP35Q9P2H5 1018 aa25.68■■□□□ 1.7
RAB11FIP4-211ENST00000621161 PLPPR3Q6T4P5 718 aa25.65■■□□□ 1.7
RAB11FIP4-211ENST00000621161 DDX10Q13206 875 aaKnown RBP25.64■■□□□ 1.7
RAB11FIP4-211ENST00000621161 MRS2Q9HD23 443 aa25.63■■□□□ 1.69
RAB11FIP4-211ENST00000621161 GOLGA6L1Q8N7Z2 621 aa25.63■■□□□ 1.69
RAB11FIP4-211ENST00000621161 HSP90AB1P08238 724 aaKnown RBP25.63■■□□□ 1.69
RAB11FIP4-211ENST00000621161 TAOK2Q9UL54 1235 aa25.62■■□□□ 1.69
RAB11FIP4-211ENST00000621161 FTSJ3Q8IY81 847 aaKnown RBP25.61■■□□□ 1.69
RAB11FIP4-211ENST00000621161 A0A0U1RQG5 324 aaPredicted RBP25.59■■□□□ 1.69
RAB11FIP4-211ENST00000621161 APPP05067 770 aa25.57■■□□□ 1.68
RAB11FIP4-211ENST00000621161 IRX6P78412 446 aaPredicted RBP25.56■■□□□ 1.68
RAB11FIP4-211ENST00000621161 NAP1L2Q9ULW6 460 aaPredicted RBP25.55■■□□□ 1.68
RAB11FIP4-211ENST00000621161 NPHP1O15259 732 aa25.53■■□□□ 1.68
RAB11FIP4-211ENST00000621161 KCNJ4P48050 445 aa25.53■■□□□ 1.68
RAB11FIP4-211ENST00000621161 GOLGA2Q08379 1002 aa25.51■■□□□ 1.67
RAB11FIP4-211ENST00000621161 ZBTB7CA1YPR0 619 aa25.51■■□□□ 1.67
RAB11FIP4-211ENST00000621161 ABCC9O60706 1549 aa25.5■■□□□ 1.67
RAB11FIP4-211ENST00000621161 C14orf37Q86TY3 774 aa25.49■■□□□ 1.67
RAB11FIP4-211ENST00000621161 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
RAB11FIP4-211ENST00000621161 ARID3CA6NKF2 412 aa25.44■■□□□ 1.66
RAB11FIP4-211ENST00000621161 CHMP4BQ9H444 224 aaKnown RBP25.44■■□□□ 1.66
RAB11FIP4-211ENST00000621161 ARID4BQ4LE39 1312 aaPredicted RBP25.44■■□□□ 1.66
RAB11FIP4-211ENST00000621161 NOP58Q9Y2X3 529 aaKnown RBP25.42■■□□□ 1.66
RAB11FIP4-211ENST00000621161 SCRIBQ14160 1630 aa25.42■■□□□ 1.66
RAB11FIP4-211ENST00000621161 STK11IPQ8N1F8 1099 aa25.42■■□□□ 1.66
RAB11FIP4-211ENST00000621161 GNL2Q13823 731 aaKnown RBP25.4■■□□□ 1.66
RAB11FIP4-211ENST00000621161 OS9Q13438 667 aaPredicted RBP25.39■■□□□ 1.66
RAB11FIP4-211ENST00000621161 HSCBQ8IWL3 235 aa25.39■■□□□ 1.66
RAB11FIP4-211ENST00000621161 HAP1P54257 671 aaPredicted RBP25.37■■□□□ 1.65
RAB11FIP4-211ENST00000621161 MCCP23508 829 aa25.35■■□□□ 1.65
RAB11FIP4-211ENST00000621161 CFAP53Q96M91 514 aa25.35■■□□□ 1.65
RAB11FIP4-211ENST00000621161 ARID3AQ99856 593 aa25.31■■□□□ 1.64
RAB11FIP4-211ENST00000621161 PLEKHG5O94827 1062 aa25.3■■□□□ 1.64
RAB11FIP4-211ENST00000621161 P3H3Q8IVL6 736 aa25.3■■□□□ 1.64
RAB11FIP4-211ENST00000621161 CSRNP3Q8WYN3 585 aa25.29■■□□□ 1.64
RAB11FIP4-211ENST00000621161 TPM4P67936 248 aa25.28■■□□□ 1.64
RAB11FIP4-211ENST00000621161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.27■■□□□ 1.641e-6■■□□□ 13.1
RAB11FIP4-211ENST00000621161 CFAP44Q96MT7 982 aa25.27■■□□□ 1.64
RAB11FIP4-211ENST00000621161 ISY1Q9ULR0 285 aaKnown RBP25.25■■□□□ 1.63
RAB11FIP4-211ENST00000621161 KDM2AQ9Y2K7 1162 aa25.25■■□□□ 1.63
RAB11FIP4-211ENST00000621161 MS4A1P11836 297 aa25.24■■□□□ 1.63
RAB11FIP4-211ENST00000621161 HSP90AA2PQ14568 343 aaPredicted RBP25.23■■□□□ 1.63
RAB11FIP4-211ENST00000621161 RRP12Q5JTH9 1297 aaKnown RBP25.22■■□□□ 1.63
RAB11FIP4-211ENST00000621161 CEP89Q96ST8 783 aa25.22■■□□□ 1.63
RAB11FIP4-211ENST00000621161 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
RAB11FIP4-211ENST00000621161 SYAP1Q96A49 352 aaPredicted RBP25.21■■□□□ 1.63
RAB11FIP4-211ENST00000621161 CCDC34Q96HJ3 373 aa25.21■■□□□ 1.63
RAB11FIP4-211ENST00000621161 RGS3P49796 1198 aa25.2■■□□□ 1.62
RAB11FIP4-211ENST00000621161 HTATSF1O43719 755 aaKnown RBP25.2■■□□□ 1.62
RAB11FIP4-211ENST00000621161 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.17■■□□□ 1.62
RAB11FIP4-211ENST00000621161 MAPK8IP3Q9UPT6 1336 aa25.16■■□□□ 1.62
RAB11FIP4-211ENST00000621161 PDE4CQ08493 712 aa25.15■■□□□ 1.62
RAB11FIP4-211ENST00000621161 GBP4Q96PP9 640 aa25.14■■□□□ 1.62
RAB11FIP4-211ENST00000621161 PPP1R15AO75807 674 aaPredicted RBP25.14■■□□□ 1.61
RAB11FIP4-211ENST00000621161 DEKP35659 375 aaKnown RBP25.13■■□□□ 1.61
RAB11FIP4-211ENST00000621161 EIF4G2P78344 907 aaKnown RBP eCLIP25.13■■□□□ 1.61
RAB11FIP4-211ENST00000621161 MEX3CQ5U5Q3 659 aaKnown RBP25.12■■□□□ 1.61
RAB11FIP4-211ENST00000621161 EEA1Q15075 1411 aa25.11■■□□□ 1.61
RAB11FIP4-211ENST00000621161 GOLGA6L3A6NEY3 463 aa25.11■■□□□ 1.61
RAB11FIP4-211ENST00000621161 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
RAB11FIP4-211ENST00000621161 KNSTRNQ9Y448 316 aa25.09■■□□□ 1.61
RAB11FIP4-211ENST00000621161 TPM3P06753 285 aa25.08■■□□□ 1.6
RAB11FIP4-211ENST00000621161 KIAA1211Q6ZU35 1233 aa25.06■■□□□ 1.6
RAB11FIP4-211ENST00000621161 NOM1Q5C9Z4 860 aaKnown RBP25.05■■□□□ 1.6
RAB11FIP4-211ENST00000621161 KRI1Q8N9T8 703 aaKnown RBP25.05■■□□□ 1.6
RAB11FIP4-211ENST00000621161 PATL2C9JE40 543 aaKnown RBP25.04■■□□□ 1.6
RAB11FIP4-211ENST00000621161 FRAT1Q92837 279 aaPredicted RBP25.04■■□□□ 1.6
RAB11FIP4-211ENST00000621161 RSPH6AQ9H0K4 717 aa25.04■■□□□ 1.6
RAB11FIP4-211ENST00000621161 VSIG10Q8N0Z9 540 aa25.03■■□□□ 1.6
RAB11FIP4-211ENST00000621161 NUDCQ9Y266 331 aa25.03■■□□□ 1.6
RAB11FIP4-211ENST00000621161 SUPT16HQ9Y5B9 1047 aaKnown RBP25.03■■□□□ 1.6
RAB11FIP4-211ENST00000621161 PPP4R2Q9NY27 417 aa25.02■■□□□ 1.6
RAB11FIP4-211ENST00000621161 NEFHP12036 1026 aa25.01■■□□□ 1.59
RAB11FIP4-211ENST00000621161 GPS2Q13227 327 aa25.01■■□□□ 1.59
RAB11FIP4-211ENST00000621161 TSPY4P0CV99 314 aa24.99■■□□□ 1.59
RAB11FIP4-211ENST00000621161 TSPY10P0CW01 314 aa24.99■■□□□ 1.59
RAB11FIP4-211ENST00000621161 SPRYD3Q8NCJ5 442 aa24.99■■□□□ 1.59
RAB11FIP4-211ENST00000621161 RB1CC1Q8TDY2 1594 aa24.99■■□□□ 1.59
RAB11FIP4-211ENST00000621161 CCDC70Q6NSX1 233 aa24.98■■□□□ 1.59
RAB11FIP4-211ENST00000621161 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
RAB11FIP4-211ENST00000621161 CSPP1Q1MSJ5 1256 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms