RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 FBLN2P98095 1184 aa17.46■□□□□ 0.39
COL1A2-213ENST00000620463 BECN1Q14457 450 aa17.44■□□□□ 0.38
COL1A2-213ENST00000620463 ARID4BQ4LE39 1312 aaPredicted RBP17.43■□□□□ 0.38
COL1A2-213ENST00000620463 VSIG10Q8N0Z9 540 aa17.42■□□□□ 0.38
COL1A2-213ENST00000620463 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.39■□□□□ 0.37
COL1A2-213ENST00000620463 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
COL1A2-213ENST00000620463 CDK11BP21127 795 aaKnown RBP17.35■□□□□ 0.37
COL1A2-213ENST00000620463 PNNQ9H307 717 aaKnown RBP17.35■□□□□ 0.37
COL1A2-213ENST00000620463 IPO9Q96P70 1041 aaKnown RBP17.33■□□□□ 0.36
COL1A2-213ENST00000620463 FANCIQ9NVI1 1328 aa17.31■□□□□ 0.36
COL1A2-213ENST00000620463 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
COL1A2-213ENST00000620463 L1TD1Q5T7N2 865 aaKnown RBP17.3■□□□□ 0.36
COL1A2-213ENST00000620463 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
COL1A2-213ENST00000620463 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
COL1A2-213ENST00000620463 DNTTIP2Q5QJE6 756 aaKnown RBP17.27■□□□□ 0.36
COL1A2-213ENST00000620463 AMER1Q5JTC6 1135 aaPredicted RBP17.27■□□□□ 0.36
COL1A2-213ENST00000620463 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
COL1A2-213ENST00000620463 EIF4G2P78344 907 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL1A2-213ENST00000620463 PKNOX2Q96KN3 472 aa17.25■□□□□ 0.35
COL1A2-213ENST00000620463 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
COL1A2-213ENST00000620463 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
COL1A2-213ENST00000620463 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
COL1A2-213ENST00000620463 NCLP19338 710 aaKnown RBP17.22■□□□□ 0.35
COL1A2-213ENST00000620463 PTMAP06454 111 aaKnown RBP17.22■□□□□ 0.35
COL1A2-213ENST00000620463 RGS3P49796 1198 aa17.22■□□□□ 0.35
COL1A2-213ENST00000620463 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
COL1A2-213ENST00000620463 ARID3AQ99856 593 aa17.18■□□□□ 0.34
COL1A2-213ENST00000620463 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
COL1A2-213ENST00000620463 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
COL1A2-213ENST00000620463 CLIP1P30622 1438 aa17.15■□□□□ 0.34
COL1A2-213ENST00000620463 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.33
COL1A2-213ENST00000620463 MSNP26038 577 aaKnown RBP17.14■□□□□ 0.33
COL1A2-213ENST00000620463 IL27Q8NEV9 243 aa17.13■□□□□ 0.33
COL1A2-213ENST00000620463 GSE1Q14687 1217 aa17.13■□□□□ 0.33
COL1A2-213ENST00000620463 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
COL1A2-213ENST00000620463 ARID3CA6NKF2 412 aa17.12■□□□□ 0.33
COL1A2-213ENST00000620463 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL1A2-213ENST00000620463 EEA1Q15075 1411 aa17.11■□□□□ 0.33
COL1A2-213ENST00000620463 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
COL1A2-213ENST00000620463 GZF1Q9H116 711 aaPredicted RBP17.09■□□□□ 0.33
COL1A2-213ENST00000620463 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
COL1A2-213ENST00000620463 NACADO15069 1562 aa17.05■□□□□ 0.32
COL1A2-213ENST00000620463 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
COL1A2-213ENST00000620463 A0A0U1RQG5 324 aaPredicted RBP17.04■□□□□ 0.32
COL1A2-213ENST00000620463 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
COL1A2-213ENST00000620463 GOLGA6L3A6NEY3 463 aa17.02■□□□□ 0.32
COL1A2-213ENST00000620463 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
COL1A2-213ENST00000620463 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
COL1A2-213ENST00000620463 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
COL1A2-213ENST00000620463 PLCB2Q00722 1185 aa16.95■□□□□ 0.3
COL1A2-213ENST00000620463 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
COL1A2-213ENST00000620463 BRPF3Q9ULD4 1205 aa16.95■□□□□ 0.3
COL1A2-213ENST00000620463 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
COL1A2-213ENST00000620463 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
COL1A2-213ENST00000620463 SLC4A3P48751 1232 aa16.93■□□□□ 0.3
COL1A2-213ENST00000620463 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
COL1A2-213ENST00000620463 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
COL1A2-213ENST00000620463 CHAF1AQ13111 956 aaPredicted RBP16.91■□□□□ 0.3
COL1A2-213ENST00000620463 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
COL1A2-213ENST00000620463 HSCBQ8IWL3 235 aa16.91■□□□□ 0.3
COL1A2-213ENST00000620463 PDE4AP27815 886 aa16.9■□□□□ 0.3
COL1A2-213ENST00000620463 UBE2Q2Q8WVN8 375 aa16.89■□□□□ 0.29
COL1A2-213ENST00000620463 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
COL1A2-213ENST00000620463 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
COL1A2-213ENST00000620463 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
COL1A2-213ENST00000620463 MSH5O43196 834 aa16.87■□□□□ 0.29
COL1A2-213ENST00000620463 MTUS2Q5JR59 1369 aa16.86■□□□□ 0.29
COL1A2-213ENST00000620463 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
COL1A2-213ENST00000620463 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
COL1A2-213ENST00000620463 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
COL1A2-213ENST00000620463 TNNT3P45378 269 aaPredicted RBP16.83■□□□□ 0.28
COL1A2-213ENST00000620463 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
COL1A2-213ENST00000620463 GBP4Q96PP9 640 aa16.82■□□□□ 0.28
COL1A2-213ENST00000620463 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
COL1A2-213ENST00000620463 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
COL1A2-213ENST00000620463 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
COL1A2-213ENST00000620463 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
COL1A2-213ENST00000620463 FAM13BQ9NYF5 915 aa16.79■□□□□ 0.28
COL1A2-213ENST00000620463 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
COL1A2-213ENST00000620463 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
COL1A2-213ENST00000620463 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
COL1A2-213ENST00000620463 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL1A2-213ENST00000620463 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
COL1A2-213ENST00000620463 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
COL1A2-213ENST00000620463 FAM43AQ8N2R8 423 aa16.75■□□□□ 0.27
COL1A2-213ENST00000620463 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
COL1A2-213ENST00000620463 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
COL1A2-213ENST00000620463 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
COL1A2-213ENST00000620463 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
COL1A2-213ENST00000620463 PTMSP20962 102 aa16.72■□□□□ 0.27
COL1A2-213ENST00000620463 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
COL1A2-213ENST00000620463 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
COL1A2-213ENST00000620463 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.26
COL1A2-213ENST00000620463 MS4A1P11836 297 aa16.69■□□□□ 0.26
COL1A2-213ENST00000620463 EXOC6Q8TAG9 804 aa16.68■□□□□ 0.26
COL1A2-213ENST00000620463 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
COL1A2-213ENST00000620463 DHX57Q6P158 1386 aaKnown RBP16.67■□□□□ 0.26
COL1A2-213ENST00000620463 CC2D1BQ5T0F9 858 aaKnown RBP16.66■□□□□ 0.26
COL1A2-213ENST00000620463 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
COL1A2-213ENST00000620463 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms