RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
SRSF3-207ENST00000620389 NEFMP07197 916 aa11.74□□□□□ -0.53
SRSF3-207ENST00000620389 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
SRSF3-207ENST00000620389 ANP32CO43423 234 aa11.73□□□□□ -0.53
SRSF3-207ENST00000620389 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
SRSF3-207ENST00000620389 HNRNPUQ00839 825 aaKnown RBP eCLIP11.69□□□□□ -0.54
SRSF3-207ENST00000620389 GSE1Q14687 1217 aa11.67□□□□□ -0.54
SRSF3-207ENST00000620389 LAS1LQ9Y4W2 734 aaKnown RBP11.67□□□□□ -0.54
SRSF3-207ENST00000620389 EEA1Q15075 1411 aa11.67□□□□□ -0.54
SRSF3-207ENST00000620389 FAM43AQ8N2R8 423 aa11.66□□□□□ -0.54
SRSF3-207ENST00000620389 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
SRSF3-207ENST00000620389 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
SRSF3-207ENST00000620389 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
SRSF3-207ENST00000620389 SOGA1O94964 1423 aa11.6□□□□□ -0.55
SRSF3-207ENST00000620389 CLIP1P30622 1438 aa11.59□□□□□ -0.55
SRSF3-207ENST00000620389 GOLGA3Q08378 1498 aa11.58□□□□□ -0.56
SRSF3-207ENST00000620389 VPS8Q8N3P4 1428 aa11.58□□□□□ -0.56
SRSF3-207ENST00000620389 FRAT1Q92837 279 aaPredicted RBP11.58□□□□□ -0.56
SRSF3-207ENST00000620389 HSP90AA2PQ14568 343 aaPredicted RBP11.57□□□□□ -0.56
SRSF3-207ENST00000620389 A0A0U1RQG5 324 aaPredicted RBP11.57□□□□□ -0.56
SRSF3-207ENST00000620389 WDR97A6NE52 1622 aa11.56□□□□□ -0.56
SRSF3-207ENST00000620389 RRP9O43818 475 aaKnown RBP11.56□□□□□ -0.56
SRSF3-207ENST00000620389 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
SRSF3-207ENST00000620389 NPM2Q86SE8 214 aaKnown RBP11.55□□□□□ -0.56
SRSF3-207ENST00000620389 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
SRSF3-207ENST00000620389 RBM10P98175 930 aaKnown RBP11.54□□□□□ -0.56
SRSF3-207ENST00000620389 FGD1P98174 961 aa11.54□□□□□ -0.56
SRSF3-207ENST00000620389 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
SRSF3-207ENST00000620389 CUX2O14529 1486 aa11.53□□□□□ -0.56
SRSF3-207ENST00000620389 AAMPQ13685 434 aa11.53□□□□□ -0.56
SRSF3-207ENST00000620389 DCAF11Q8TEB1 546 aa11.53□□□□□ -0.56
SRSF3-207ENST00000620389 MAPKBP1O60336 1514 aa11.52□□□□□ -0.57
SRSF3-207ENST00000620389 NFKBIBQ15653 356 aa11.51□□□□□ -0.57
SRSF3-207ENST00000620389 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
SRSF3-207ENST00000620389 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
SRSF3-207ENST00000620389 PDE4CQ08493 712 aa11.49□□□□□ -0.57
SRSF3-207ENST00000620389 HSP90AA1P07900 732 aaKnown RBP11.48□□□□□ -0.57
SRSF3-207ENST00000620389 RRAGDQ9NQL2 400 aaPredicted RBP11.48□□□□□ -0.57
SRSF3-207ENST00000620389 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
SRSF3-207ENST00000620389 ZBED9Q6R2W3 1325 aa11.45□□□□□ -0.58
SRSF3-207ENST00000620389 NAP1L5Q96NT1 182 aaPredicted RBP11.45□□□□□ -0.58
SRSF3-207ENST00000620389 RRBP1Q9P2E9 1410 aaKnown RBP11.45□□□□□ -0.58
SRSF3-207ENST00000620389 PDE4AP27815 886 aa11.43□□□□□ -0.58
SRSF3-207ENST00000620389 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
SRSF3-207ENST00000620389 RAB3GAP2Q9H2M9 1393 aa11.43□□□□□ -0.58
SRSF3-207ENST00000620389 BACH2Q9BYV9 841 aa11.42□□□□□ -0.58
SRSF3-207ENST00000620389 TCERG1O14776 1098 aaKnown RBP11.41□□□□□ -0.58
SRSF3-207ENST00000620389 DDRGK1Q96HY6 314 aa11.41□□□□□ -0.58
SRSF3-207ENST00000620389 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
SRSF3-207ENST00000620389 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
SRSF3-207ENST00000620389 AKNAQ7Z591 1439 aa11.4□□□□□ -0.58
SRSF3-207ENST00000620389 PNNQ9H307 717 aaKnown RBP11.4□□□□□ -0.59
SRSF3-207ENST00000620389 RNF123Q5XPI4 1314 aa11.39□□□□□ -0.59
SRSF3-207ENST00000620389 CCDC184Q52MB2 194 aa11.39□□□□□ -0.59
SRSF3-207ENST00000620389 KIF21BO75037 1637 aa11.38□□□□□ -0.59
SRSF3-207ENST00000620389 PDIA4P13667 645 aaKnown RBP11.38□□□□□ -0.59
SRSF3-207ENST00000620389 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
SRSF3-207ENST00000620389 FAM9BQ8IZU0 186 aa11.38□□□□□ -0.59
SRSF3-207ENST00000620389 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
SRSF3-207ENST00000620389 FOXD1Q16676 465 aa11.37□□□□□ -0.59
SRSF3-207ENST00000620389 PRDM4Q9UKN5 801 aa11.37□□□□□ -0.59
SRSF3-207ENST00000620389 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
SRSF3-207ENST00000620389 FRAT2O75474 233 aaPredicted RBP11.36□□□□□ -0.59
SRSF3-207ENST00000620389 SCRIBQ14160 1630 aa11.36□□□□□ -0.59
SRSF3-207ENST00000620389 WIZO95785 1651 aa11.36□□□□□ -0.59
SRSF3-207ENST00000620389 MS4A1P11836 297 aa11.35□□□□□ -0.59
SRSF3-207ENST00000620389 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
SRSF3-207ENST00000620389 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
SRSF3-207ENST00000620389 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
SRSF3-207ENST00000620389 CLCN1P35523 988 aa11.35□□□□□ -0.59
SRSF3-207ENST00000620389 BCL11BQ9C0K0 894 aaPredicted RBP11.35□□□□□ -0.59
SRSF3-207ENST00000620389 SLC4A3P48751 1232 aa11.33□□□□□ -0.59
SRSF3-207ENST00000620389 CENPJQ9HC77 1338 aaPredicted RBP11.33□□□□□ -0.6
SRSF3-207ENST00000620389 RANGAP1P46060 587 aaPredicted RBP11.32□□□□□ -0.6
SRSF3-207ENST00000620389 RGS3P49796 1198 aa11.32□□□□□ -0.6
SRSF3-207ENST00000620389 PDCL3Q9H2J4 239 aa11.32□□□□□ -0.6
SRSF3-207ENST00000620389 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
SRSF3-207ENST00000620389 NUDCQ9Y266 331 aa11.32□□□□□ -0.6
SRSF3-207ENST00000620389 SETD5Q9C0A6 1442 aa11.3□□□□□ -0.6
SRSF3-207ENST00000620389 PLPPR3Q6T4P5 718 aa11.3□□□□□ -0.6
SRSF3-207ENST00000620389 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
SRSF3-207ENST00000620389 L1TD1Q5T7N2 865 aaKnown RBP11.29□□□□□ -0.6
SRSF3-207ENST00000620389 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
SRSF3-207ENST00000620389 POGKQ9P215 609 aa11.27□□□□□ -0.61
SRSF3-207ENST00000620389 RAPGEF2Q9Y4G8 1499 aa11.25□□□□□ -0.61
SRSF3-207ENST00000620389 TONSLQ96HA7 1378 aa11.24□□□□□ -0.61
SRSF3-207ENST00000620389 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
SRSF3-207ENST00000620389 FHAD1B1AJZ9 1412 aa11.23□□□□□ -0.61
SRSF3-207ENST00000620389 CNTLNQ9NXG0 1405 aa11.23□□□□□ -0.61
SRSF3-207ENST00000620389 TPM2P07951 284 aa11.22□□□□□ -0.61
SRSF3-207ENST00000620389 EXOC6Q8TAG9 804 aa11.22□□□□□ -0.61
SRSF3-207ENST00000620389 NCOA2Q15596 1464 aa11.21□□□□□ -0.61
SRSF3-207ENST00000620389 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.614e-7■■□□□ 11.9
SRSF3-207ENST00000620389 ARAP1Q96P48 1450 aa11.21□□□□□ -0.62
SRSF3-207ENST00000620389 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.62
SRSF3-207ENST00000620389 TAF7LQ5H9L4 462 aa11.19□□□□□ -0.62
SRSF3-207ENST00000620389 RRP1P56182 461 aaKnown RBP11.18□□□□□ -0.62
SRSF3-207ENST00000620389 HSPA5P11021 654 aaKnown RBP11.17□□□□□ -0.62
SRSF3-207ENST00000620389 ARXQ96QS3 562 aa11.17□□□□□ -0.62
SRSF3-207ENST00000620389 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms