RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
SRSF3-207ENST00000620389 HRCP23327 699 aa14.69□□□□□ -0.06
SRSF3-207ENST00000620389 MYT1Q01538 1121 aa14.59□□□□□ -0.07
SRSF3-207ENST00000620389 NISCHQ9Y2I1 1504 aa14.5□□□□□ -0.09
SRSF3-207ENST00000620389 AEBP2Q6ZN18 517 aaPredicted RBP14.4□□□□□ -0.1
SRSF3-207ENST00000620389 PPARGC1BQ86YN6 1023 aaKnown RBP14.32□□□□□ -0.12
SRSF3-207ENST00000620389 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
SRSF3-207ENST00000620389 PCGF6Q9BYE7 350 aa14.09□□□□□ -0.15
SRSF3-207ENST00000620389 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.18
SRSF3-207ENST00000620389 TTBK1Q5TCY1 1321 aaPredicted RBP13.87□□□□□ -0.19
SRSF3-207ENST00000620389 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
SRSF3-207ENST00000620389 ACIN1Q9UKV3 1341 aaKnown RBP13.67□□□□□ -0.22
SRSF3-207ENST00000620389 ZEB1P37275 1124 aaPredicted RBP13.6□□□□□ -0.23
SRSF3-207ENST00000620389 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
SRSF3-207ENST00000620389 GTF3C3Q9Y5Q9 886 aa13.58□□□□□ -0.23
SRSF3-207ENST00000620389 DCAF1Q9Y4B6 1507 aa13.56□□□□□ -0.24
SRSF3-207ENST00000620389 BCL11AQ9H165 835 aa13.55□□□□□ -0.24
SRSF3-207ENST00000620389 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
SRSF3-207ENST00000620389 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
SRSF3-207ENST00000620389 CCDC180Q9P1Z9 1646 aa13.47□□□□□ -0.25
SRSF3-207ENST00000620389 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
SRSF3-207ENST00000620389 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
SRSF3-207ENST00000620389 FAM9AQ8IZU1 332 aaPredicted RBP13.42□□□□□ -0.26
SRSF3-207ENST00000620389 SHROOM4Q9ULL8 1493 aa13.28□□□□□ -0.28
SRSF3-207ENST00000620389 ANP32EQ9BTT0 268 aa13.2□□□□□ -0.3
SRSF3-207ENST00000620389 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
SRSF3-207ENST00000620389 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
SRSF3-207ENST00000620389 ERICH6Q7L0X2 663 aa13.14□□□□□ -0.31
SRSF3-207ENST00000620389 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
SRSF3-207ENST00000620389 APLP2Q06481 763 aa13.04□□□□□ -0.32
SRSF3-207ENST00000620389 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
SRSF3-207ENST00000620389 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
SRSF3-207ENST00000620389 TRIM41Q8WV44 630 aa12.88□□□□□ -0.35
SRSF3-207ENST00000620389 CCER1Q8TC90 406 aaPredicted RBP12.86□□□□□ -0.35
SRSF3-207ENST00000620389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
SRSF3-207ENST00000620389 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
SRSF3-207ENST00000620389 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
SRSF3-207ENST00000620389 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
SRSF3-207ENST00000620389 MIER1Q8N108 512 aa12.74□□□□□ -0.37
SRSF3-207ENST00000620389 ANO8Q9HCE9 1232 aaPredicted RBP12.65□□□□□ -0.39
SRSF3-207ENST00000620389 RBM19Q9Y4C8 960 aaKnown RBP12.54□□□□□ -0.4
SRSF3-207ENST00000620389 MSH5O43196 834 aa12.48□□□□□ -0.41
SRSF3-207ENST00000620389 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
SRSF3-207ENST00000620389 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
SRSF3-207ENST00000620389 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
SRSF3-207ENST00000620389 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
SRSF3-207ENST00000620389 DEKP35659 375 aaKnown RBP12.42□□□□□ -0.42
SRSF3-207ENST00000620389 BCANQ96GW7 911 aa12.42□□□□□ -0.42
SRSF3-207ENST00000620389 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
SRSF3-207ENST00000620389 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
SRSF3-207ENST00000620389 CCDC136Q96JN2 1154 aa12.37□□□□□ -0.43
SRSF3-207ENST00000620389 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
SRSF3-207ENST00000620389 FKBP8Q14318 412 aa12.33□□□□□ -0.44
SRSF3-207ENST00000620389 PHF23Q9BUL5 403 aaPredicted RBP12.27□□□□□ -0.44
SRSF3-207ENST00000620389 EIF5BO60841 1220 aaKnown RBP12.27□□□□□ -0.45
SRSF3-207ENST00000620389 ITGAEP38570 1179 aa12.24□□□□□ -0.45
SRSF3-207ENST00000620389 SENP3Q9H4L4 574 aaPredicted RBP12.24□□□□□ -0.45
SRSF3-207ENST00000620389 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
SRSF3-207ENST00000620389 NEFLP07196 543 aa12.2□□□□□ -0.46
SRSF3-207ENST00000620389 SLC24A1O60721 1099 aa12.17□□□□□ -0.46
SRSF3-207ENST00000620389 IL27Q8NEV9 243 aa12.16□□□□□ -0.46
SRSF3-207ENST00000620389 PKNOX2Q96KN3 472 aa12.16□□□□□ -0.46
SRSF3-207ENST00000620389 WRNQ14191 1432 aaPredicted RBP eCLIP12.15□□□□□ -0.46
SRSF3-207ENST00000620389 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
SRSF3-207ENST00000620389 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
SRSF3-207ENST00000620389 NBR1Q14596 966 aa12.12□□□□□ -0.47
SRSF3-207ENST00000620389 CDK11AQ9UQ88 783 aaPredicted RBP12.11□□□□□ -0.47
SRSF3-207ENST00000620389 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
SRSF3-207ENST00000620389 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
SRSF3-207ENST00000620389 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
SRSF3-207ENST00000620389 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
SRSF3-207ENST00000620389 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
SRSF3-207ENST00000620389 RTL5Q5HYW3 569 aaPredicted RBP12□□□□□ -0.49
SRSF3-207ENST00000620389 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
SRSF3-207ENST00000620389 CEP162Q5TB80 1403 aa11.96□□□□□ -0.5
SRSF3-207ENST00000620389 PODXL2Q9NZ53 605 aa11.95□□□□□ -0.5
SRSF3-207ENST00000620389 TRIM52Q96A61 297 aa11.94□□□□□ -0.5
SRSF3-207ENST00000620389 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
SRSF3-207ENST00000620389 ABCC9O60706 1549 aa11.91□□□□□ -0.5
SRSF3-207ENST00000620389 C11orf95C9JLR9 678 aaPredicted RBP11.91□□□□□ -0.5
SRSF3-207ENST00000620389 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
SRSF3-207ENST00000620389 WASHC2AQ641Q2 1341 aa11.87□□□□□ -0.51
SRSF3-207ENST00000620389 IRX6P78412 446 aaPredicted RBP11.87□□□□□ -0.51
SRSF3-207ENST00000620389 DHX57Q6P158 1386 aaKnown RBP11.86□□□□□ -0.51
SRSF3-207ENST00000620389 GLIPR1L2Q4G1C9 344 aa11.84□□□□□ -0.51
SRSF3-207ENST00000620389 IPO9Q96P70 1041 aaKnown RBP11.83□□□□□ -0.51
SRSF3-207ENST00000620389 ZMYND15Q9H091 742 aa11.83□□□□□ -0.51
SRSF3-207ENST00000620389 WASHC2CQ9Y4E1 1318 aa11.83□□□□□ -0.52
SRSF3-207ENST00000620389 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
SRSF3-207ENST00000620389 TNIKQ9UKE5 1360 aa11.83□□□□□ -0.52
SRSF3-207ENST00000620389 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
SRSF3-207ENST00000620389 PPP4R2Q9NY27 417 aa11.83□□□□□ -0.52
SRSF3-207ENST00000620389 CCER2I3L3R5 266 aa11.82□□□□□ -0.52
SRSF3-207ENST00000620389 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
SRSF3-207ENST00000620389 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
SRSF3-207ENST00000620389 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
SRSF3-207ENST00000620389 BRPF3Q9ULD4 1205 aa11.81□□□□□ -0.52
SRSF3-207ENST00000620389 USP35Q9P2H5 1018 aa11.79□□□□□ -0.52
SRSF3-207ENST00000620389 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
SRSF3-207ENST00000620389 NACADO15069 1562 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms