RNA–Protein interactions for RNA: ENST00000619881.4

CARHSP1-220, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CARHSP1, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-220ENST00000619881 FGD1P98174 961 aa19.45■□□□□ 0.7
CARHSP1-220ENST00000619881 TIMELESSQ9UNS1 1208 aa19.45■□□□□ 0.7
CARHSP1-220ENST00000619881 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
CARHSP1-220ENST00000619881 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
CARHSP1-220ENST00000619881 PDIA4P13667 645 aaKnown RBP19.4■□□□□ 0.7
CARHSP1-220ENST00000619881 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.69
CARHSP1-220ENST00000619881 PAK3O75914 559 aaPredicted RBP19.38■□□□□ 0.69
CARHSP1-220ENST00000619881 WASHC2CQ9Y4E1 1318 aa19.37■□□□□ 0.69
CARHSP1-220ENST00000619881 AAMPQ13685 434 aa19.36■□□□□ 0.69
CARHSP1-220ENST00000619881 A0A0U1RQG5 324 aaPredicted RBP19.35■□□□□ 0.69
CARHSP1-220ENST00000619881 UBTFP17480 764 aaKnown RBP19.33■□□□□ 0.68
CARHSP1-220ENST00000619881 RBM10P98175 930 aaKnown RBP19.33■□□□□ 0.68
CARHSP1-220ENST00000619881 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
CARHSP1-220ENST00000619881 USP35Q9P2H5 1018 aa19.31■□□□□ 0.68
CARHSP1-220ENST00000619881 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
CARHSP1-220ENST00000619881 KIF21BO75037 1637 aa19.27■□□□□ 0.68
CARHSP1-220ENST00000619881 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.67
CARHSP1-220ENST00000619881 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
CARHSP1-220ENST00000619881 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
CARHSP1-220ENST00000619881 BRPF3Q9ULD4 1205 aa19.24■□□□□ 0.67
CARHSP1-220ENST00000619881 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
CARHSP1-220ENST00000619881 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
CARHSP1-220ENST00000619881 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
CARHSP1-220ENST00000619881 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
CARHSP1-220ENST00000619881 VPS8Q8N3P4 1428 aa19.21■□□□□ 0.67
CARHSP1-220ENST00000619881 ANP32AP39687 249 aaKnown RBP19.2■□□□□ 0.66
CARHSP1-220ENST00000619881 FAM43AQ8N2R8 423 aa19.19■□□□□ 0.66
CARHSP1-220ENST00000619881 CLIP1P30622 1438 aa19.19■□□□□ 0.66
CARHSP1-220ENST00000619881 NEFMP07197 916 aa19.18■□□□□ 0.66
CARHSP1-220ENST00000619881 BCL11BQ9C0K0 894 aaPredicted RBP19.17■□□□□ 0.66
CARHSP1-220ENST00000619881 RRP9O43818 475 aaKnown RBP19.15■□□□□ 0.66
CARHSP1-220ENST00000619881 HSP90AA2PQ14568 343 aaPredicted RBP19.14■□□□□ 0.65
CARHSP1-220ENST00000619881 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
CARHSP1-220ENST00000619881 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
CARHSP1-220ENST00000619881 PPP4R2Q9NY27 417 aa19.11■□□□□ 0.65
CARHSP1-220ENST00000619881 DHX57Q6P158 1386 aaKnown RBP19.08■□□□□ 0.64
CARHSP1-220ENST00000619881 TAF7LQ5H9L4 462 aa19.08■□□□□ 0.64
CARHSP1-220ENST00000619881 GSE1Q14687 1217 aa19.05■□□□□ 0.64
CARHSP1-220ENST00000619881 TRIM52Q96A61 297 aa19.02■□□□□ 0.64
CARHSP1-220ENST00000619881 RAPGEF2Q9Y4G8 1499 aa19.02■□□□□ 0.64
CARHSP1-220ENST00000619881 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
CARHSP1-220ENST00000619881 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
CARHSP1-220ENST00000619881 NESP48681 1621 aa18.97■□□□□ 0.63
CARHSP1-220ENST00000619881 HSP90AA1P07900 732 aaKnown RBP18.97■□□□□ 0.63
CARHSP1-220ENST00000619881 CFTRP13569 1480 aa18.97■□□□□ 0.63
CARHSP1-220ENST00000619881 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
CARHSP1-220ENST00000619881 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
CARHSP1-220ENST00000619881 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
CARHSP1-220ENST00000619881 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
CARHSP1-220ENST00000619881 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
CARHSP1-220ENST00000619881 IRX6P78412 446 aaPredicted RBP18.93■□□□□ 0.62
CARHSP1-220ENST00000619881 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
CARHSP1-220ENST00000619881 CUX2O14529 1486 aa18.91■□□□□ 0.62
CARHSP1-220ENST00000619881 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
CARHSP1-220ENST00000619881 RRBP1Q9P2E9 1410 aaKnown RBP18.87■□□□□ 0.61
CARHSP1-220ENST00000619881 ARXQ96QS3 562 aa18.87■□□□□ 0.61
CARHSP1-220ENST00000619881 LAS1LQ9Y4W2 734 aaKnown RBP18.87■□□□□ 0.61
CARHSP1-220ENST00000619881 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
CARHSP1-220ENST00000619881 CUX1P39880 1505 aa18.85■□□□□ 0.61
CARHSP1-220ENST00000619881 CALD1Q05682 793 aaKnown RBP18.85■□□□□ 0.61
CARHSP1-220ENST00000619881 B4GALNT3Q6L9W6 998 aa18.82■□□□□ 0.6
CARHSP1-220ENST00000619881 FRAT1Q92837 279 aaPredicted RBP18.82■□□□□ 0.6
CARHSP1-220ENST00000619881 PRDM4Q9UKN5 801 aa18.81■□□□□ 0.6
CARHSP1-220ENST00000619881 NAP1L5Q96NT1 182 aaPredicted RBP18.8■□□□□ 0.6
CARHSP1-220ENST00000619881 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
CARHSP1-220ENST00000619881 KANK4Q5T7N3 995 aaPredicted RBP18.79■□□□□ 0.6
CARHSP1-220ENST00000619881 CENPJQ9HC77 1338 aaPredicted RBP18.79■□□□□ 0.6
CARHSP1-220ENST00000619881 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
CARHSP1-220ENST00000619881 PRDM2Q13029 1718 aa18.78■□□□□ 0.6
CARHSP1-220ENST00000619881 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
CARHSP1-220ENST00000619881 ANP32CO43423 234 aa18.75■□□□□ 0.59
CARHSP1-220ENST00000619881 NAP1L2Q9ULW6 460 aaPredicted RBP18.74■□□□□ 0.59
CARHSP1-220ENST00000619881 DDX10Q13206 875 aaKnown RBP18.73■□□□□ 0.59
CARHSP1-220ENST00000619881 MAPKBP1O60336 1514 aa18.73■□□□□ 0.59
CARHSP1-220ENST00000619881 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
CARHSP1-220ENST00000619881 RRAGDQ9NQL2 400 aaPredicted RBP18.72■□□□□ 0.59
CARHSP1-220ENST00000619881 BBXQ8WY36 941 aaPredicted RBP18.71■□□□□ 0.59
CARHSP1-220ENST00000619881 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
CARHSP1-220ENST00000619881 RSPH4AQ5TD94 716 aa18.69■□□□□ 0.58
CARHSP1-220ENST00000619881 PDCL3Q9H2J4 239 aa18.69■□□□□ 0.58
CARHSP1-220ENST00000619881 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
CARHSP1-220ENST00000619881 RGS3P49796 1198 aa18.69■□□□□ 0.58
CARHSP1-220ENST00000619881 NFKBIBQ15653 356 aa18.67■□□□□ 0.58
CARHSP1-220ENST00000619881 HNRNPUQ00839 825 aaKnown RBP eCLIP18.66■□□□□ 0.589e-6■■■□□ 18.8
CARHSP1-220ENST00000619881 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
CARHSP1-220ENST00000619881 PAXIP1Q6ZW49 1069 aaPredicted RBP18.64■□□□□ 0.58
CARHSP1-220ENST00000619881 FGD5Q6ZNL6 1462 aa18.64■□□□□ 0.57
CARHSP1-220ENST00000619881 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
CARHSP1-220ENST00000619881 IPO4Q8TEX9 1081 aaKnown RBP18.62■□□□□ 0.57
CARHSP1-220ENST00000619881 CLCN1P35523 988 aa18.61■□□□□ 0.57
CARHSP1-220ENST00000619881 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
CARHSP1-220ENST00000619881 CANXP27824 592 aaKnown RBP18.6■□□□□ 0.57
CARHSP1-220ENST00000619881 GTF2E1P29083 439 aaPredicted RBP18.6■□□□□ 0.57
CARHSP1-220ENST00000619881 NPM2Q86SE8 214 aaKnown RBP18.6■□□□□ 0.57
CARHSP1-220ENST00000619881 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
CARHSP1-220ENST00000619881 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
CARHSP1-220ENST00000619881 LAMC3Q9Y6N6 1575 aa18.6■□□□□ 0.57
CARHSP1-220ENST00000619881 CHMP4BQ9H444 224 aaKnown RBP18.59■□□□□ 0.57
CARHSP1-220ENST00000619881 MAP3K1Q13233 1512 aa18.58■□□□□ 0.57
CARHSP1-220ENST00000619881 NCLP19338 710 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms