RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 MROH2BQ7Z745 1585 aa21.42■■□□□ 1.02
SYNRG-223ENST00000616179 P3H3Q8IVL6 736 aa21.4■■□□□ 1.02
SYNRG-223ENST00000616179 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
SYNRG-223ENST00000616179 MRS2Q9HD23 443 aa21.36■■□□□ 1.01
SYNRG-223ENST00000616179 CCER2I3L3R5 266 aa21.35■■□□□ 1.01
SYNRG-223ENST00000616179 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
SYNRG-223ENST00000616179 EEA1Q15075 1411 aa21.34■■□□□ 1.01
SYNRG-223ENST00000616179 IL27Q8NEV9 243 aa21.31■■□□□ 1
SYNRG-223ENST00000616179 PAK3O75914 559 aaPredicted RBP21.31■■□□□ 1
SYNRG-223ENST00000616179 NEFMP07197 916 aa21.31■■□□□ 1
SYNRG-223ENST00000616179 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
SYNRG-223ENST00000616179 WIZO95785 1651 aa21.26■□□□□ 0.99
SYNRG-223ENST00000616179 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
SYNRG-223ENST00000616179 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
SYNRG-223ENST00000616179 RAB3GAP2Q9H2M9 1393 aa21.22■□□□□ 0.99
SYNRG-223ENST00000616179 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
SYNRG-223ENST00000616179 ZNF326Q5BKZ1 582 aaKnown RBP21.19■□□□□ 0.98
SYNRG-223ENST00000616179 PPP1R15AO75807 674 aaPredicted RBP21.17■□□□□ 0.98
SYNRG-223ENST00000616179 IPO9Q96P70 1041 aaKnown RBP21.15■□□□□ 0.98
SYNRG-223ENST00000616179 ARXQ96QS3 562 aa21.15■□□□□ 0.98
SYNRG-223ENST00000616179 ERICH6BQ5W0A0 696 aa21.11■□□□□ 0.97
SYNRG-223ENST00000616179 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
SYNRG-223ENST00000616179 CHIC2Q9UKJ5 165 aa21.04■□□□□ 0.96
SYNRG-223ENST00000616179 EIF4G2P78344 907 aaKnown RBP eCLIP21.03■□□□□ 0.96
SYNRG-223ENST00000616179 SETD5Q9C0A6 1442 aa21■□□□□ 0.95
SYNRG-223ENST00000616179 HSPA5P11021 654 aaKnown RBP20.97■□□□□ 0.95
SYNRG-223ENST00000616179 TMC1Q8TDI8 760 aa20.96■□□□□ 0.95
SYNRG-223ENST00000616179 PPM1GO15355 546 aaPredicted RBP20.95■□□□□ 0.94
SYNRG-223ENST00000616179 TIMELESSQ9UNS1 1208 aa20.95■□□□□ 0.94
SYNRG-223ENST00000616179 CCDC184Q52MB2 194 aa20.94■□□□□ 0.94
SYNRG-223ENST00000616179 BRPF3Q9ULD4 1205 aa20.94■□□□□ 0.94
SYNRG-223ENST00000616179 RRP7BPQ9NSQ0 103 aa20.92■□□□□ 0.94
SYNRG-223ENST00000616179 SLC4A3P48751 1232 aa20.91■□□□□ 0.94
SYNRG-223ENST00000616179 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
SYNRG-223ENST00000616179 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
SYNRG-223ENST00000616179 GLIPR1L2Q4G1C9 344 aa20.85■□□□□ 0.93
SYNRG-223ENST00000616179 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
SYNRG-223ENST00000616179 KIF21BO75037 1637 aa20.82■□□□□ 0.92
SYNRG-223ENST00000616179 FOXD1Q16676 465 aa20.78■□□□□ 0.92
SYNRG-223ENST00000616179 DDRGK1Q96HY6 314 aa20.78■□□□□ 0.92
SYNRG-223ENST00000616179 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
SYNRG-223ENST00000616179 PDE4AP27815 886 aa20.77■□□□□ 0.91
SYNRG-223ENST00000616179 GSE1Q14687 1217 aa20.76■□□□□ 0.91
SYNRG-223ENST00000616179 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
SYNRG-223ENST00000616179 NAP1L5Q96NT1 182 aaPredicted RBP20.74■□□□□ 0.91
SYNRG-223ENST00000616179 ZBED9Q6R2W3 1325 aa20.74■□□□□ 0.91
SYNRG-223ENST00000616179 ARID4BQ4LE39 1312 aaPredicted RBP20.72■□□□□ 0.91
SYNRG-223ENST00000616179 WASHC2AQ641Q2 1341 aa20.72■□□□□ 0.91
SYNRG-223ENST00000616179 EXOC6Q8TAG9 804 aa20.72■□□□□ 0.91
SYNRG-223ENST00000616179 RGS3P49796 1198 aa20.71■□□□□ 0.91
SYNRG-223ENST00000616179 AKNAQ7Z591 1439 aa20.71■□□□□ 0.91
SYNRG-223ENST00000616179 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
SYNRG-223ENST00000616179 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
SYNRG-223ENST00000616179 TCERG1O14776 1098 aaKnown RBP20.68■□□□□ 0.9
SYNRG-223ENST00000616179 FRAT1Q92837 279 aaPredicted RBP20.66■□□□□ 0.9
SYNRG-223ENST00000616179 RRBP1Q9P2E9 1410 aaKnown RBP20.66■□□□□ 0.9
SYNRG-223ENST00000616179 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
SYNRG-223ENST00000616179 UBE2Q2Q8WVN8 375 aa20.64■□□□□ 0.89
SYNRG-223ENST00000616179 MTUS2Q5JR59 1369 aa20.64■□□□□ 0.89
SYNRG-223ENST00000616179 NFKBIBQ15653 356 aa20.63■□□□□ 0.89
SYNRG-223ENST00000616179 SKAP1Q86WV1 359 aa20.62■□□□□ 0.89
SYNRG-223ENST00000616179 PLIN1O60240 522 aa20.62■□□□□ 0.89
SYNRG-223ENST00000616179 L3MBTL2Q969R5 705 aa20.61■□□□□ 0.89
SYNRG-223ENST00000616179 NACADO15069 1562 aa20.61■□□□□ 0.89
SYNRG-223ENST00000616179 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
SYNRG-223ENST00000616179 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
SYNRG-223ENST00000616179 KDM2AQ9Y2K7 1162 aa20.6■□□□□ 0.89
SYNRG-223ENST00000616179 RCAN3Q9UKA8 241 aa20.6■□□□□ 0.89
SYNRG-223ENST00000616179 PHLDB1Q86UU1 1377 aa20.58■□□□□ 0.89
SYNRG-223ENST00000616179 PKNOX2Q96KN3 472 aa20.56■□□□□ 0.88
SYNRG-223ENST00000616179 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
SYNRG-223ENST00000616179 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
SYNRG-223ENST00000616179 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
SYNRG-223ENST00000616179 SLKQ9H2G2 1235 aaPredicted RBP20.55■□□□□ 0.88
SYNRG-223ENST00000616179 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.88
SYNRG-223ENST00000616179 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.88
SYNRG-223ENST00000616179 SPRYD3Q8NCJ5 442 aa20.52■□□□□ 0.87
SYNRG-223ENST00000616179 MAPKBP1O60336 1514 aa20.5■□□□□ 0.87
SYNRG-223ENST00000616179 C11orf95C9JLR9 678 aaPredicted RBP20.5■□□□□ 0.87
SYNRG-223ENST00000616179 FRAT2O75474 233 aaPredicted RBP20.5■□□□□ 0.87
SYNRG-223ENST00000616179 RRP1P56182 461 aaKnown RBP20.5■□□□□ 0.87
SYNRG-223ENST00000616179 BACH2Q9BYV9 841 aa20.47■□□□□ 0.87
SYNRG-223ENST00000616179 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
SYNRG-223ENST00000616179 PNNQ9H307 717 aaKnown RBP20.45■□□□□ 0.86
SYNRG-223ENST00000616179 ZNF777Q9ULD5 760 aaPredicted RBP20.44■□□□□ 0.86
SYNRG-223ENST00000616179 ARHGAP35Q9NRY4 1499 aa20.44■□□□□ 0.86
SYNRG-223ENST00000616179 CNTLNQ9NXG0 1405 aa20.43■□□□□ 0.86
SYNRG-223ENST00000616179 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
SYNRG-223ENST00000616179 MPHOSPH9Q99550 1183 aa20.42■□□□□ 0.86
SYNRG-223ENST00000616179 CCDC7Q96M83 1385 aa20.42■□□□□ 0.86
SYNRG-223ENST00000616179 KIF7Q2M1P5 1343 aa20.42■□□□□ 0.86
SYNRG-223ENST00000616179 HSP90AA2PQ14568 343 aaPredicted RBP20.41■□□□□ 0.86
SYNRG-223ENST00000616179 CRBNQ96SW2 442 aa20.41■□□□□ 0.86
SYNRG-223ENST00000616179 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
SYNRG-223ENST00000616179 UPF2Q9HAU5 1272 aaKnown RBP20.39■□□□□ 0.86
SYNRG-223ENST00000616179 BECN1Q14457 450 aa20.39■□□□□ 0.85
SYNRG-223ENST00000616179 CARD11Q9BXL7 1154 aa20.38■□□□□ 0.85
SYNRG-223ENST00000616179 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
SYNRG-223ENST00000616179 MS4A1P11836 297 aa20.36■□□□□ 0.85
SYNRG-223ENST00000616179 TRIM44Q96DX7 344 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms