RNA–Protein interactions for RNA: ENST00000615949.6

ZNF248-209, Transcript of zinc finger protein 248, humanhuman

TSL 5 BASIC

Gene ZNF248, Length 518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-209ENST00000615949 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
ZNF248-209ENST00000615949 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
ZNF248-209ENST00000615949 SMARCA2P51531 1590 aa11.11□□□□□ -0.63
ZNF248-209ENST00000615949 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
ZNF248-209ENST00000615949 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
ZNF248-209ENST00000615949 BBXQ8WY36 941 aaPredicted RBP11.1□□□□□ -0.63
ZNF248-209ENST00000615949 ATAD2BQ9ULI0 1458 aa11.09□□□□□ -0.63
ZNF248-209ENST00000615949 WIZO95785 1651 aa11.08□□□□□ -0.64
ZNF248-209ENST00000615949 GSE1Q14687 1217 aa11.08□□□□□ -0.64
ZNF248-209ENST00000615949 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
ZNF248-209ENST00000615949 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
ZNF248-209ENST00000615949 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
ZNF248-209ENST00000615949 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
ZNF248-209ENST00000615949 TAOK2Q9UL54 1235 aa11.03□□□□□ -0.64
ZNF248-209ENST00000615949 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
ZNF248-209ENST00000615949 BAZ1BQ9UIG0 1483 aaKnown RBP11.03□□□□□ -0.64
ZNF248-209ENST00000615949 TOP2AP11388 1531 aaKnown RBP11.01□□□□□ -0.65
ZNF248-209ENST00000615949 HMGXB3Q12766 1538 aa11.01□□□□□ -0.65
ZNF248-209ENST00000615949 RGL2O15211 777 aa11□□□□□ -0.65
ZNF248-209ENST00000615949 REM2Q8IYK8 340 aaPredicted RBP11□□□□□ -0.65
ZNF248-209ENST00000615949 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
ZNF248-209ENST00000615949 FAM212AQ96EL1 285 aa10.95□□□□□ -0.66
ZNF248-209ENST00000615949 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
ZNF248-209ENST00000615949 NUBP1P53384 320 aa10.93□□□□□ -0.66
ZNF248-209ENST00000615949 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
ZNF248-209ENST00000615949 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
ZNF248-209ENST00000615949 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
ZNF248-209ENST00000615949 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
ZNF248-209ENST00000615949 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
ZNF248-209ENST00000615949 CCDC88BA6NC98 1476 aa10.89□□□□□ -0.67
ZNF248-209ENST00000615949 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
ZNF248-209ENST00000615949 CHRM1P11229 460 aaPredicted RBP10.85□□□□□ -0.67
ZNF248-209ENST00000615949 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
ZNF248-209ENST00000615949 PITPNM1O00562 1244 aa10.83□□□□□ -0.68
ZNF248-209ENST00000615949 RIOK3O14730 519 aaKnown RBP10.83□□□□□ -0.68
ZNF248-209ENST00000615949 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
ZNF248-209ENST00000615949 BCANQ96GW7 911 aa10.82□□□□□ -0.68
ZNF248-209ENST00000615949 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
ZNF248-209ENST00000615949 VGFO15240 615 aaPredicted RBP10.79□□□□□ -0.68
ZNF248-209ENST00000615949 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.69
ZNF248-209ENST00000615949 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
ZNF248-209ENST00000615949 RYDENQ9NUL5 291 aaKnown RBP10.75□□□□□ -0.69
ZNF248-209ENST00000615949 CFTRP13569 1480 aa10.74□□□□□ -0.69
ZNF248-209ENST00000615949 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
ZNF248-209ENST00000615949 SGIP1Q9BQI5 828 aa10.74□□□□□ -0.69
ZNF248-209ENST00000615949 STK25O00506 426 aa10.71□□□□□ -0.69
ZNF248-209ENST00000615949 LAMC3Q9Y6N6 1575 aa10.71□□□□□ -0.69
ZNF248-209ENST00000615949 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
ZNF248-209ENST00000615949 PYGBP11216 843 aa10.66□□□□□ -0.7
ZNF248-209ENST00000615949 ZNF467Q7Z7K2 595 aaPredicted RBP10.66□□□□□ -0.7
ZNF248-209ENST00000615949 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
ZNF248-209ENST00000615949 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
ZNF248-209ENST00000615949 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
ZNF248-209ENST00000615949 NESP48681 1621 aa10.65□□□□□ -0.7
ZNF248-209ENST00000615949 PRDM2Q13029 1718 aa10.64□□□□□ -0.71
ZNF248-209ENST00000615949 PAK3O75914 559 aaPredicted RBP10.63□□□□□ -0.71
ZNF248-209ENST00000615949 STK24Q9Y6E0 443 aa10.63□□□□□ -0.71
ZNF248-209ENST00000615949 FANCD2Q9BXW9 1451 aa10.62□□□□□ -0.71
ZNF248-209ENST00000615949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.61□□□□□ -0.71
ZNF248-209ENST00000615949 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
ZNF248-209ENST00000615949 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
ZNF248-209ENST00000615949 ZFP91Q96JP5 570 aaPredicted RBP10.61□□□□□ -0.71
ZNF248-209ENST00000615949 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
ZNF248-209ENST00000615949 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
ZNF248-209ENST00000615949 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
ZNF248-209ENST00000615949 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
ZNF248-209ENST00000615949 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
ZNF248-209ENST00000615949 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
ZNF248-209ENST00000615949 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
ZNF248-209ENST00000615949 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
ZNF248-209ENST00000615949 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
ZNF248-209ENST00000615949 PDAP1Q13442 181 aaKnown RBP10.55□□□□□ -0.72
ZNF248-209ENST00000615949 ZNF579Q8NAF0 562 aaKnown RBP10.53□□□□□ -0.72
ZNF248-209ENST00000615949 KIF21AQ7Z4S6 1674 aa10.52□□□□□ -0.73
ZNF248-209ENST00000615949 NBR1Q14596 966 aa10.51□□□□□ -0.73
ZNF248-209ENST00000615949 CCDC61Q9Y6R9 512 aa10.51□□□□□ -0.73
ZNF248-209ENST00000615949 MRC2Q9UBG0 1479 aa10.5□□□□□ -0.73
ZNF248-209ENST00000615949 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
ZNF248-209ENST00000615949 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
ZNF248-209ENST00000615949 CUX1P39880 1505 aa10.49□□□□□ -0.73
ZNF248-209ENST00000615949 DNMBPQ6XZF7 1577 aa10.49□□□□□ -0.73
ZNF248-209ENST00000615949 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
ZNF248-209ENST00000615949 BIVM-ERCC5R4GMW8 1640 aa10.48□□□□□ -0.73
ZNF248-209ENST00000615949 TOPBP1Q92547 1522 aa10.48□□□□□ -0.73
ZNF248-209ENST00000615949 URB2Q14146 1524 aaKnown RBP10.47□□□□□ -0.73
ZNF248-209ENST00000615949 PSEN1P49768 467 aa10.45□□□□□ -0.74
ZNF248-209ENST00000615949 PCDHB13Q9Y5F0 798 aa10.45□□□□□ -0.74
ZNF248-209ENST00000615949 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
ZNF248-209ENST00000615949 PCDHB8Q9UN66 801 aa10.44□□□□□ -0.74
ZNF248-209ENST00000615949 WDR62O43379 1518 aa10.43□□□□□ -0.74
ZNF248-209ENST00000615949 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
ZNF248-209ENST00000615949 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
ZNF248-209ENST00000615949 SOGA1O94964 1423 aa10.41□□□□□ -0.74
ZNF248-209ENST00000615949 POLA1P09884 1462 aaPredicted RBP10.4□□□□□ -0.74
ZNF248-209ENST00000615949 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
ZNF248-209ENST00000615949 EEA1Q15075 1411 aa10.39□□□□□ -0.75
ZNF248-209ENST00000615949 SOX12O15370 315 aa10.38□□□□□ -0.75
ZNF248-209ENST00000615949 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
ZNF248-209ENST00000615949 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
ZNF248-209ENST00000615949 KIF27Q86VH2 1401 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms