RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 WDR43Q15061 677 aaKnown RBP eCLIP9.49□□□□□ -0.89
ALMS1-207ENST00000614410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.48□□□□□ -0.894e-7■■□□□ 12.8
ALMS1-207ENST00000614410 ZRSR1Q15695 479 aaKnown RBP9.46□□□□□ -0.9
ALMS1-207ENST00000614410 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
ALMS1-207ENST00000614410 ARID4BQ4LE39 1312 aaPredicted RBP9.45□□□□□ -0.9
ALMS1-207ENST00000614410 MYH16Q9H6N6 1097 aa9.45□□□□□ -0.9
ALMS1-207ENST00000614410 BECN1Q14457 450 aa9.42□□□□□ -0.9
ALMS1-207ENST00000614410 PABPN1Q86U42 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
ALMS1-207ENST00000614410 GOLGA6L22H0YM25 854 aa9.4□□□□□ -0.9
ALMS1-207ENST00000614410 TONSLQ96HA7 1378 aa9.4□□□□□ -0.91
ALMS1-207ENST00000614410 MRS2Q9HD23 443 aa9.39□□□□□ -0.91
ALMS1-207ENST00000614410 NAP1L2Q9ULW6 460 aaPredicted RBP9.38□□□□□ -0.91
ALMS1-207ENST00000614410 CHIC2Q9UKJ5 165 aa9.38□□□□□ -0.91
ALMS1-207ENST00000614410 LAS1LQ9Y4W2 734 aaKnown RBP9.38□□□□□ -0.91
ALMS1-207ENST00000614410 ARID3AQ99856 593 aa9.38□□□□□ -0.91
ALMS1-207ENST00000614410 DDRGK1Q96HY6 314 aa9.37□□□□□ -0.91
ALMS1-207ENST00000614410 PPM1GO15355 546 aaPredicted RBP9.37□□□□□ -0.91
ALMS1-207ENST00000614410 CLSTN1O94985 981 aa9.34□□□□□ -0.91
ALMS1-207ENST00000614410 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
ALMS1-207ENST00000614410 MIER1Q8N108 512 aa9.33□□□□□ -0.92
ALMS1-207ENST00000614410 SPRYD3Q8NCJ5 442 aa9.33□□□□□ -0.92
ALMS1-207ENST00000614410 SUPT16HQ9Y5B9 1047 aaKnown RBP9.33□□□□□ -0.92
ALMS1-207ENST00000614410 ANP32EQ9BTT0 268 aa9.32□□□□□ -0.92
ALMS1-207ENST00000614410 NPHP1O15259 732 aa9.32□□□□□ -0.92
ALMS1-207ENST00000614410 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
ALMS1-207ENST00000614410 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
ALMS1-207ENST00000614410 HSP90AB1P08238 724 aaKnown RBP9.31□□□□□ -0.92
ALMS1-207ENST00000614410 FGD1P98174 961 aa9.31□□□□□ -0.92
ALMS1-207ENST00000614410 CASC1Q6TDU7 716 aa9.3□□□□□ -0.92
ALMS1-207ENST00000614410 DRC7Q8IY82 874 aa9.3□□□□□ -0.92
ALMS1-207ENST00000614410 FTSJ3Q8IY81 847 aaKnown RBP9.3□□□□□ -0.92
ALMS1-207ENST00000614410 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-207ENST00000614410 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-207ENST00000614410 PRM3Q9NNZ6 103 aa9.29□□□□□ -0.92
ALMS1-207ENST00000614410 RGS3P49796 1198 aa9.28□□□□□ -0.92
ALMS1-207ENST00000614410 KCNJ4P48050 445 aa9.27□□□□□ -0.92
ALMS1-207ENST00000614410 PDE4CQ08493 712 aa9.26□□□□□ -0.93
ALMS1-207ENST00000614410 RGL3Q3MIN7 710 aa9.26□□□□□ -0.93
ALMS1-207ENST00000614410 MSNP26038 577 aaKnown RBP9.25□□□□□ -0.93
ALMS1-207ENST00000614410 LMOD2Q6P5Q4 547 aa9.25□□□□□ -0.93
ALMS1-207ENST00000614410 FRAT1Q92837 279 aaPredicted RBP9.25□□□□□ -0.93
ALMS1-207ENST00000614410 ISY1Q9ULR0 285 aaKnown RBP9.25□□□□□ -0.93
ALMS1-207ENST00000614410 NPM1P06748 294 aaKnown RBP eCLIP9.25□□□□□ -0.93
ALMS1-207ENST00000614410 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
ALMS1-207ENST00000614410 OS9Q13438 667 aaPredicted RBP9.24□□□□□ -0.93
ALMS1-207ENST00000614410 GOLGA6L6A8MZA4 724 aa9.24□□□□□ -0.93
ALMS1-207ENST00000614410 CHAF1AQ13111 956 aaPredicted RBP9.23□□□□□ -0.93
ALMS1-207ENST00000614410 GOLGA6L4A6NEF3 574 aa9.23□□□□□ -0.93
ALMS1-207ENST00000614410 B4GALNT3Q6L9W6 998 aa9.22□□□□□ -0.93
ALMS1-207ENST00000614410 NOC3LQ8WTT2 800 aaKnown RBP9.21□□□□□ -0.94
ALMS1-207ENST00000614410 GZF1Q9H116 711 aaPredicted RBP9.2□□□□□ -0.94
ALMS1-207ENST00000614410 NOP58Q9Y2X3 529 aaKnown RBP9.2□□□□□ -0.94
ALMS1-207ENST00000614410 NRDCO43847 1150 aa9.2□□□□□ -0.94
ALMS1-207ENST00000614410 TNNT3P45378 269 aaPredicted RBP9.19□□□□□ -0.94
ALMS1-207ENST00000614410 FBXO3Q9UK99 471 aa9.19□□□□□ -0.94
ALMS1-207ENST00000614410 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
ALMS1-207ENST00000614410 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
ALMS1-207ENST00000614410 PPP1R15AO75807 674 aaPredicted RBP9.18□□□□□ -0.94
ALMS1-207ENST00000614410 SOX12O15370 315 aa9.18□□□□□ -0.94
ALMS1-207ENST00000614410 DEKP35659 375 aaKnown RBP9.17□□□□□ -0.94
ALMS1-207ENST00000614410 TSPY4P0CV99 314 aa9.17□□□□□ -0.94
ALMS1-207ENST00000614410 TSPY10P0CW01 314 aa9.17□□□□□ -0.94
ALMS1-207ENST00000614410 RRP7BPQ9NSQ0 103 aa9.16□□□□□ -0.94
ALMS1-207ENST00000614410 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
ALMS1-207ENST00000614410 APBB1O00213 710 aa9.16□□□□□ -0.94
ALMS1-207ENST00000614410 CREBRFQ8IUR6 639 aa9.16□□□□□ -0.94
ALMS1-207ENST00000614410 U2SURPO15042 1029 aaKnown RBP9.15□□□□□ -0.94
ALMS1-207ENST00000614410 GNL2Q13823 731 aaKnown RBP9.15□□□□□ -0.95
ALMS1-207ENST00000614410 KIAA2012Q0VF49 1180 aa9.14□□□□□ -0.95
ALMS1-207ENST00000614410 KCNH8Q96L42 1107 aa9.14□□□□□ -0.95
ALMS1-207ENST00000614410 A0A0U1RQG5 324 aaPredicted RBP9.14□□□□□ -0.95
ALMS1-207ENST00000614410 CC2D1BQ5T0F9 858 aaKnown RBP9.14□□□□□ -0.95
ALMS1-207ENST00000614410 KNSTRNQ9Y448 316 aa9.14□□□□□ -0.95
ALMS1-207ENST00000614410 HSCBQ8IWL3 235 aa9.13□□□□□ -0.95
ALMS1-207ENST00000614410 CFAP53Q96M91 514 aa9.13□□□□□ -0.95
ALMS1-207ENST00000614410 WWC1Q8IX03 1113 aa9.12□□□□□ -0.95
ALMS1-207ENST00000614410 MAPK8IP3Q9UPT6 1336 aa9.11□□□□□ -0.95
ALMS1-207ENST00000614410 L1TD1Q5T7N2 865 aaKnown RBP9.1□□□□□ -0.95
ALMS1-207ENST00000614410 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.96
ALMS1-207ENST00000614410 PPP4R2Q9NY27 417 aa9.08□□□□□ -0.96
ALMS1-207ENST00000614410 ABCC9O60706 1549 aa9.07□□□□□ -0.96
ALMS1-207ENST00000614410 MCCP23508 829 aa9.07□□□□□ -0.96
ALMS1-207ENST00000614410 GOLGA6L1Q8N7Z2 621 aa9.06□□□□□ -0.96
ALMS1-207ENST00000614410 SLKQ9H2G2 1235 aaPredicted RBP9.06□□□□□ -0.96
ALMS1-207ENST00000614410 HSP90B1P14625 803 aaKnown RBP9.06□□□□□ -0.96
ALMS1-207ENST00000614410 PTMSP20962 102 aa9.06□□□□□ -0.96
ALMS1-207ENST00000614410 ZNF330Q9Y3S2 320 aaPredicted RBP9.06□□□□□ -0.96
ALMS1-207ENST00000614410 POGKQ9P215 609 aa9.05□□□□□ -0.96
ALMS1-207ENST00000614410 FOXD4L1Q9NU39 408 aa9.05□□□□□ -0.96
ALMS1-207ENST00000614410 CARD11Q9BXL7 1154 aa9.05□□□□□ -0.96
ALMS1-207ENST00000614410 NUDCQ9Y266 331 aa9.05□□□□□ -0.96
ALMS1-207ENST00000614410 KIAA1211Q6ZU35 1233 aa9.04□□□□□ -0.96
ALMS1-207ENST00000614410 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
ALMS1-207ENST00000614410 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
ALMS1-207ENST00000614410 MTUS2Q5JR59 1369 aa9.02□□□□□ -0.97
ALMS1-207ENST00000614410 PES1O00541 588 aaKnown RBP9.02□□□□□ -0.97
ALMS1-207ENST00000614410 SAFB2Q14151 953 aaKnown RBP eCLIP9.02□□□□□ -0.97
ALMS1-207ENST00000614410 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
ALMS1-207ENST00000614410 RBM19Q9Y4C8 960 aaKnown RBP9.02□□□□□ -0.97
ALMS1-207ENST00000614410 FOXD4L6Q3SYB3 417 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms