RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
ALMS1-207ENST00000614410 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
ALMS1-207ENST00000614410 PELP1Q8IZL8 1130 aaKnown RBP11.54□□□□□ -0.56
ALMS1-207ENST00000614410 SUPT5HO00267 1087 aaKnown RBP11.46□□□□□ -0.57
ALMS1-207ENST00000614410 ERICH6Q7L0X2 663 aa11.34□□□□□ -0.59
ALMS1-207ENST00000614410 TTBK1Q5TCY1 1321 aaPredicted RBP11.22□□□□□ -0.61
ALMS1-207ENST00000614410 MYT1Q01538 1121 aa11.16□□□□□ -0.62
ALMS1-207ENST00000614410 SHROOM4Q9ULL8 1493 aa11.09□□□□□ -0.63
ALMS1-207ENST00000614410 APLP2Q06481 763 aa11.08□□□□□ -0.64
ALMS1-207ENST00000614410 CCER1Q8TC90 406 aaPredicted RBP11.07□□□□□ -0.64
ALMS1-207ENST00000614410 PCGF6Q9BYE7 350 aa11.05□□□□□ -0.64
ALMS1-207ENST00000614410 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
ALMS1-207ENST00000614410 RANGAP1P46060 587 aaPredicted RBP10.98□□□□□ -0.65
ALMS1-207ENST00000614410 CENPBP07199 599 aaPredicted RBP10.92□□□□□ -0.66
ALMS1-207ENST00000614410 ATP1B4Q9UN42 357 aaPredicted RBP10.92□□□□□ -0.66
ALMS1-207ENST00000614410 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
ALMS1-207ENST00000614410 NEFLP07196 543 aa10.81□□□□□ -0.68
ALMS1-207ENST00000614410 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
ALMS1-207ENST00000614410 CNGB1Q14028 1251 aaPredicted RBP10.7□□□□□ -0.7
ALMS1-207ENST00000614410 PPARGC1BQ86YN6 1023 aaKnown RBP10.66□□□□□ -0.7
ALMS1-207ENST00000614410 POLR3GLQ9BT43 218 aa10.65□□□□□ -0.71
ALMS1-207ENST00000614410 ZEB1P37275 1124 aaPredicted RBP10.58□□□□□ -0.72
ALMS1-207ENST00000614410 CHIC1Q5VXU3 224 aa10.54□□□□□ -0.72
ALMS1-207ENST00000614410 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
ALMS1-207ENST00000614410 MYT1LQ9UL68 1186 aa10.52□□□□□ -0.73
ALMS1-207ENST00000614410 SLC4A1APQ9BWU0 796 aaKnown RBP10.49□□□□□ -0.73
ALMS1-207ENST00000614410 ITGAEP38570 1179 aa10.46□□□□□ -0.73
ALMS1-207ENST00000614410 TRIM41Q8WV44 630 aa10.44□□□□□ -0.74
ALMS1-207ENST00000614410 CLSPNQ9HAW4 1339 aa10.44□□□□□ -0.74
ALMS1-207ENST00000614410 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
ALMS1-207ENST00000614410 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
ALMS1-207ENST00000614410 BCL11AQ9H165 835 aa10.37□□□□□ -0.75
ALMS1-207ENST00000614410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.32□□□□□ -0.76
ALMS1-207ENST00000614410 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
ALMS1-207ENST00000614410 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
ALMS1-207ENST00000614410 HRCP23327 699 aa10.25□□□□□ -0.77
ALMS1-207ENST00000614410 BCANQ96GW7 911 aa10.23□□□□□ -0.77
ALMS1-207ENST00000614410 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
ALMS1-207ENST00000614410 EIF5BO60841 1220 aaKnown RBP10.17□□□□□ -0.78
ALMS1-207ENST00000614410 DIEXFQ68CQ4 756 aaKnown RBP10.13□□□□□ -0.79
ALMS1-207ENST00000614410 LOC105371045A0A1W2PR82 267 aa10.12□□□□□ -0.79
ALMS1-207ENST00000614410 ZBTB47Q9UFB7 747 aaPredicted RBP10.12□□□□□ -0.79
ALMS1-207ENST00000614410 CDK11AQ9UQ88 783 aaPredicted RBP10.09□□□□□ -0.79
ALMS1-207ENST00000614410 NEUROD1Q13562 356 aa10.07□□□□□ -0.8
ALMS1-207ENST00000614410 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
ALMS1-207ENST00000614410 NPM2Q86SE8 214 aaKnown RBP10.04□□□□□ -0.8
ALMS1-207ENST00000614410 NISCHQ9Y2I1 1504 aa10.02□□□□□ -0.8
ALMS1-207ENST00000614410 FAM50AQ14320 339 aaKnown RBP10□□□□□ -0.81
ALMS1-207ENST00000614410 TRIM52Q96A61 297 aa10□□□□□ -0.81
ALMS1-207ENST00000614410 CANXP27824 592 aaKnown RBP9.99□□□□□ -0.81
ALMS1-207ENST00000614410 ZNF326Q5BKZ1 582 aaKnown RBP9.97□□□□□ -0.81
ALMS1-207ENST00000614410 ARXQ96QS3 562 aa9.97□□□□□ -0.81
ALMS1-207ENST00000614410 ANP32CO43423 234 aa9.92□□□□□ -0.82
ALMS1-207ENST00000614410 ANP32BQ92688 251 aaKnown RBP9.91□□□□□ -0.82
ALMS1-207ENST00000614410 ANP32AP39687 249 aaKnown RBP9.9□□□□□ -0.82
ALMS1-207ENST00000614410 HSP90AA1P07900 732 aaKnown RBP9.9□□□□□ -0.82
ALMS1-207ENST00000614410 NBR1Q14596 966 aa9.89□□□□□ -0.83
ALMS1-207ENST00000614410 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
ALMS1-207ENST00000614410 NEFMP07197 916 aa9.84□□□□□ -0.83
ALMS1-207ENST00000614410 GLIPR1L2Q4G1C9 344 aa9.84□□□□□ -0.83
ALMS1-207ENST00000614410 PLPPR3Q6T4P5 718 aa9.82□□□□□ -0.84
ALMS1-207ENST00000614410 FKBP8Q14318 412 aa9.77□□□□□ -0.85
ALMS1-207ENST00000614410 TULP1O00294 542 aaPredicted RBP9.75□□□□□ -0.85
ALMS1-207ENST00000614410 UPF2Q9HAU5 1272 aaKnown RBP9.72□□□□□ -0.85
ALMS1-207ENST00000614410 CDK11BP21127 795 aaKnown RBP9.7□□□□□ -0.86
ALMS1-207ENST00000614410 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
ALMS1-207ENST00000614410 ARID3CA6NKF2 412 aa9.7□□□□□ -0.86
ALMS1-207ENST00000614410 FBLN2P98095 1184 aa9.69□□□□□ -0.86
ALMS1-207ENST00000614410 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
ALMS1-207ENST00000614410 FAM9BQ8IZU0 186 aa9.69□□□□□ -0.86
ALMS1-207ENST00000614410 A0A0G2JS52 829 aa9.68□□□□□ -0.86
ALMS1-207ENST00000614410 ACIN1Q9UKV3 1341 aaKnown RBP9.66□□□□□ -0.86
ALMS1-207ENST00000614410 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
ALMS1-207ENST00000614410 CHGAP10645 457 aaKnown RBP9.66□□□□□ -0.86
ALMS1-207ENST00000614410 SCAF1Q9H7N4 1312 aaKnown RBP9.65□□□□□ -0.87
ALMS1-207ENST00000614410 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
ALMS1-207ENST00000614410 IRX6P78412 446 aaPredicted RBP9.64□□□□□ -0.87
ALMS1-207ENST00000614410 P3H3Q8IVL6 736 aa9.63□□□□□ -0.87
ALMS1-207ENST00000614410 NCBP3Q53F19 620 aaKnown RBP9.63□□□□□ -0.87
ALMS1-207ENST00000614410 SENP3Q9H4L4 574 aaPredicted RBP9.62□□□□□ -0.87
ALMS1-207ENST00000614410 TRIM44Q96DX7 344 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-207ENST00000614410 TAOK2Q9UL54 1235 aa9.61□□□□□ -0.87
ALMS1-207ENST00000614410 ZNF777Q9ULD5 760 aaPredicted RBP9.6□□□□□ -0.87
ALMS1-207ENST00000614410 CCDC136Q96JN2 1154 aa9.6□□□□□ -0.87
ALMS1-207ENST00000614410 STAG3Q9UJ98 1225 aa9.59□□□□□ -0.87
ALMS1-207ENST00000614410 DNTTIP2Q5QJE6 756 aaKnown RBP9.59□□□□□ -0.87
ALMS1-207ENST00000614410 RTN4Q9NQC3 1192 aaKnown RBP9.59□□□□□ -0.87
ALMS1-207ENST00000614410 DDX10Q13206 875 aaKnown RBP9.59□□□□□ -0.87
ALMS1-207ENST00000614410 NCLP19338 710 aaKnown RBP9.57□□□□□ -0.88
ALMS1-207ENST00000614410 SENP3-EIF4A1A0A087X0R7 540 aa9.57□□□□□ -0.88
ALMS1-207ENST00000614410 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
ALMS1-207ENST00000614410 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
ALMS1-207ENST00000614410 ZBTB7CA1YPR0 619 aa9.55□□□□□ -0.88
ALMS1-207ENST00000614410 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.53□□□□□ -0.88
ALMS1-207ENST00000614410 ESF1Q9H501 851 aaKnown RBP9.53□□□□□ -0.88
ALMS1-207ENST00000614410 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
ALMS1-207ENST00000614410 PTMAP06454 111 aaKnown RBP9.51□□□□□ -0.89
ALMS1-207ENST00000614410 HIRIP3Q9BW71 556 aaPredicted RBP9.5□□□□□ -0.89
ALMS1-207ENST00000614410 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
ALMS1-207ENST00000614410 NAP1L5Q96NT1 182 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms