RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
SYCP1-209ENST00000613524 CYB5RLQ6IPT4 315 aa8.24□□□□□ -1.09
SYCP1-209ENST00000613524 SCAF1Q9H7N4 1312 aaKnown RBP8.23□□□□□ -1.09
SYCP1-209ENST00000613524 SYNJ1O43426 1573 aa8.22□□□□□ -1.09
SYCP1-209ENST00000613524 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
SYCP1-209ENST00000613524 BCANQ96GW7 911 aa8.21□□□□□ -1.09
SYCP1-209ENST00000613524 TULP1O00294 542 aaPredicted RBP8.21□□□□□ -1.1
SYCP1-209ENST00000613524 ARID3CA6NKF2 412 aa8.2□□□□□ -1.1
SYCP1-209ENST00000613524 RNF216Q9NWF9 866 aaPredicted RBP8.2□□□□□ -1.1
SYCP1-209ENST00000613524 IFT140Q96RY7 1462 aa8.2□□□□□ -1.1
SYCP1-209ENST00000613524 PRDM2Q13029 1718 aa8.19□□□□□ -1.1
SYCP1-209ENST00000613524 SNAPC4Q5SXM2 1469 aa8.18□□□□□ -1.1
SYCP1-209ENST00000613524 EIF4G3O43432 1585 aaKnown RBP8.18□□□□□ -1.1
SYCP1-209ENST00000613524 P3H3Q8IVL6 736 aa8.17□□□□□ -1.1
SYCP1-209ENST00000613524 RUSC2Q8N2Y8 1516 aa8.16□□□□□ -1.1
SYCP1-209ENST00000613524 GAPVD1Q14C86 1478 aa8.16□□□□□ -1.1
SYCP1-209ENST00000613524 TRHP20396 242 aaPredicted RBP8.16□□□□□ -1.1
SYCP1-209ENST00000613524 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
SYCP1-209ENST00000613524 POTEHQ6S545 545 aa8.13□□□□□ -1.11
SYCP1-209ENST00000613524 ATP1B4Q9UN42 357 aaPredicted RBP8.13□□□□□ -1.11
SYCP1-209ENST00000613524 TARBP1Q13395 1621 aaKnown RBP8.12□□□□□ -1.11
SYCP1-209ENST00000613524 UBTFP17480 764 aaKnown RBP8.12□□□□□ -1.11
SYCP1-209ENST00000613524 IFNLR1Q8IU57 520 aaPredicted RBP8.12□□□□□ -1.11
SYCP1-209ENST00000613524 PKD2Q13563 968 aa8.11□□□□□ -1.11
SYCP1-209ENST00000613524 GRIN2BQ13224 1484 aa8.1□□□□□ -1.11
SYCP1-209ENST00000613524 NPM1P06748 294 aaKnown RBP eCLIP8.1□□□□□ -1.11
SYCP1-209ENST00000613524 TOP2BQ02880 1626 aa8.1□□□□□ -1.11
SYCP1-209ENST00000613524 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
SYCP1-209ENST00000613524 KIF27Q86VH2 1401 aa8.09□□□□□ -1.12
SYCP1-209ENST00000613524 CHD1O14646 1710 aa8.08□□□□□ -1.12
SYCP1-209ENST00000613524 ABCA10Q8WWZ4 1543 aa8.07□□□□□ -1.12
SYCP1-209ENST00000613524 LOC105371045A0A1W2PR82 267 aa8.06□□□□□ -1.12
SYCP1-209ENST00000613524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.06□□□□□ -1.12
SYCP1-209ENST00000613524 HNRNPUL2Q1KMD3 747 aaKnown RBP8.06□□□□□ -1.12
SYCP1-209ENST00000613524 CARMIL1Q5VZK9 1371 aa8.06□□□□□ -1.12
SYCP1-209ENST00000613524 IGF1RP08069 1367 aa8.06□□□□□ -1.12
SYCP1-209ENST00000613524 PAXIP1Q6ZW49 1069 aaPredicted RBP8.05□□□□□ -1.12
SYCP1-209ENST00000613524 JPH4Q96JJ6 628 aa8.05□□□□□ -1.12
SYCP1-209ENST00000613524 TSHZ2Q9NRE2 1034 aa8.04□□□□□ -1.12
SYCP1-209ENST00000613524 BIVM-ERCC5R4GMW8 1640 aa8.04□□□□□ -1.12
SYCP1-209ENST00000613524 PBRM1Q86U86 1689 aa8.03□□□□□ -1.12
SYCP1-209ENST00000613524 SYNJ2O15056 1496 aa8.03□□□□□ -1.12
SYCP1-209ENST00000613524 ATXN8OSP0DMR3 200 aa8.02□□□□□ -1.13
SYCP1-209ENST00000613524 GRIN2AQ12879 1464 aa8.02□□□□□ -1.13
SYCP1-209ENST00000613524 MAGI1Q96QZ7 1491 aaPredicted RBP8.01□□□□□ -1.13
SYCP1-209ENST00000613524 ARHGEF11O15085 1522 aa8.01□□□□□ -1.13
SYCP1-209ENST00000613524 FHAD1B1AJZ9 1412 aa8.01□□□□□ -1.13
SYCP1-209ENST00000613524 VASPP50552 380 aaPredicted RBP8□□□□□ -1.13
SYCP1-209ENST00000613524 ERCC6L2Q5T890 1561 aa8□□□□□ -1.13
SYCP1-209ENST00000613524 HOXD11P31277 338 aaPredicted RBP8□□□□□ -1.13
SYCP1-209ENST00000613524 ABCA5Q8WWZ7 1642 aa8□□□□□ -1.13
SYCP1-209ENST00000613524 PRG4Q92954 1404 aaPredicted RBP7.99□□□□□ -1.13
SYCP1-209ENST00000613524 KCNH8Q96L42 1107 aa7.98□□□□□ -1.13
SYCP1-209ENST00000613524 WDR97A6NE52 1622 aa7.98□□□□□ -1.13
SYCP1-209ENST00000613524 RIMBP3CA6NJZ7 1639 aa7.98□□□□□ -1.13
SYCP1-209ENST00000613524 RIMBP3BA6NNM3 1639 aa7.98□□□□□ -1.13
SYCP1-209ENST00000613524 RIMBP3Q9UFD9 1639 aa7.98□□□□□ -1.13
SYCP1-209ENST00000613524 ADAMTS12P58397 1594 aa7.97□□□□□ -1.13
SYCP1-209ENST00000613524 VSIG10Q8N0Z9 540 aa7.97□□□□□ -1.13
SYCP1-209ENST00000613524 CEP170Q5SW79 1584 aa7.96□□□□□ -1.13
SYCP1-209ENST00000613524 RAPGEF2Q9Y4G8 1499 aa7.96□□□□□ -1.14
SYCP1-209ENST00000613524 DCAF8L1A6NGE4 600 aa7.95□□□□□ -1.14
SYCP1-209ENST00000613524 ARAP1Q96P48 1450 aa7.95□□□□□ -1.14
SYCP1-209ENST00000613524 PPARGC1BQ86YN6 1023 aaKnown RBP7.94□□□□□ -1.14
SYCP1-209ENST00000613524 ERICH3Q5RHP9 1530 aa7.93□□□□□ -1.14
SYCP1-209ENST00000613524 SPDYE4A6NLX3 237 aa7.93□□□□□ -1.14
SYCP1-209ENST00000613524 MKRN4PQ13434 485 aaPredicted RBP7.93□□□□□ -1.14
SYCP1-209ENST00000613524 DMRT2Q9Y5R5 561 aa7.92□□□□□ -1.14
SYCP1-209ENST00000613524 FAM69CQ0P6D2 419 aa7.91□□□□□ -1.14
SYCP1-209ENST00000613524 PTPRGP23470 1445 aa7.9□□□□□ -1.14
SYCP1-209ENST00000613524 RGL2O15211 777 aa7.9□□□□□ -1.14
SYCP1-209ENST00000613524 DAXXQ9UER7 740 aaPredicted RBP7.89□□□□□ -1.15
SYCP1-209ENST00000613524 NUP160Q12769 1436 aa7.89□□□□□ -1.15
SYCP1-209ENST00000613524 GTF3C3Q9Y5Q9 886 aa7.89□□□□□ -1.15
SYCP1-209ENST00000613524 FHOD3Q2V2M9 1422 aa7.89□□□□□ -1.15
SYCP1-209ENST00000613524 CLASP1Q7Z460 1538 aa7.87□□□□□ -1.15
SYCP1-209ENST00000613524 CARMIL2Q6F5E8 1435 aa7.87□□□□□ -1.15
SYCP1-209ENST00000613524 KIAA0586Q9BVV6 1533 aa7.86□□□□□ -1.15
SYCP1-209ENST00000613524 U3KPZ7 1027 aaPredicted RBP7.86□□□□□ -1.15
SYCP1-209ENST00000613524 CUL7Q14999 1698 aa7.85□□□□□ -1.15
SYCP1-209ENST00000613524 IQGAP2Q13576 1575 aa7.85□□□□□ -1.15
SYCP1-209ENST00000613524 PLB1Q6P1J6 1458 aa7.85□□□□□ -1.15
SYCP1-209ENST00000613524 MYT1LQ9UL68 1186 aa7.84□□□□□ -1.15
SYCP1-209ENST00000613524 PRXQ9BXM0 1461 aa7.83□□□□□ -1.16
SYCP1-209ENST00000613524 TNIKQ9UKE5 1360 aa7.82□□□□□ -1.16
SYCP1-209ENST00000613524 ECM2O94769 699 aaPredicted RBP7.81□□□□□ -1.16
SYCP1-209ENST00000613524 GOLGA3Q08378 1498 aa7.81□□□□□ -1.16
SYCP1-209ENST00000613524 ZNF777Q9ULD5 760 aaPredicted RBP7.81□□□□□ -1.16
SYCP1-209ENST00000613524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.8□□□□□ -1.16
SYCP1-209ENST00000613524 FBXO3Q9UK99 471 aa7.8□□□□□ -1.16
SYCP1-209ENST00000613524 TSPOAP1O95153 1857 aa7.8□□□□□ -1.16
SYCP1-209ENST00000613524 DISP1Q96F81 1524 aa7.79□□□□□ -1.16
SYCP1-209ENST00000613524 ZNF219Q9P2Y4 722 aaPredicted RBP7.79□□□□□ -1.16
SYCP1-209ENST00000613524 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.78□□□□□ -1.16
SYCP1-209ENST00000613524 EEA1Q15075 1411 aa7.78□□□□□ -1.16
SYCP1-209ENST00000613524 UACAQ9BZF9 1416 aa7.77□□□□□ -1.17
SYCP1-209ENST00000613524 CHGAP10645 457 aaKnown RBP7.77□□□□□ -1.17
SYCP1-209ENST00000613524 CLIP1P30622 1438 aa7.76□□□□□ -1.17
SYCP1-209ENST00000613524 PLEKHD1A6NEE1 506 aa7.76□□□□□ -1.17
SYCP1-209ENST00000613524 CTTNBP2Q8WZ74 1663 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms