RNA–Protein interactions for RNA: ENST00000613434.4

YME1L1-209, Transcript of YME1 like 1 ATPase, humanhuman

TSL 2 BASIC

Gene YME1L1, Length 4,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1-209ENST00000613434 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
YME1L1-209ENST00000613434 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
YME1L1-209ENST00000613434 MRS2Q9HD23 443 aa13.95□□□□□ -0.18
YME1L1-209ENST00000613434 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.183e-6■□□□□ 9.7
YME1L1-209ENST00000613434 RTL5Q5HYW3 569 aaPredicted RBP13.95□□□□□ -0.18
YME1L1-209ENST00000613434 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
YME1L1-209ENST00000613434 RUSC2Q8N2Y8 1516 aa13.93□□□□□ -0.18
YME1L1-209ENST00000613434 PLEKHD1A6NEE1 506 aa13.93□□□□□ -0.18
YME1L1-209ENST00000613434 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
YME1L1-209ENST00000613434 TMC1Q8TDI8 760 aa13.92□□□□□ -0.18
YME1L1-209ENST00000613434 CFDP1Q9UEE9 299 aaPredicted RBP13.92□□□□□ -0.18
YME1L1-209ENST00000613434 IRX6P78412 446 aaPredicted RBP13.91□□□□□ -0.18
YME1L1-209ENST00000613434 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
YME1L1-209ENST00000613434 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
YME1L1-209ENST00000613434 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
YME1L1-209ENST00000613434 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
YME1L1-209ENST00000613434 RGL3Q3MIN7 710 aa13.88□□□□□ -0.19
YME1L1-209ENST00000613434 BCL11AQ9H165 835 aa13.88□□□□□ -0.19
YME1L1-209ENST00000613434 FHAD1B1AJZ9 1412 aa13.88□□□□□ -0.19
YME1L1-209ENST00000613434 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
YME1L1-209ENST00000613434 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
YME1L1-209ENST00000613434 RAPGEF2Q9Y4G8 1499 aa13.86□□□□□ -0.19
YME1L1-209ENST00000613434 SENP3Q9H4L4 574 aaPredicted RBP13.83□□□□□ -0.2
YME1L1-209ENST00000613434 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
YME1L1-209ENST00000613434 EIF4G1Q04637 1599 aaKnown RBP13.82□□□□□ -0.2
YME1L1-209ENST00000613434 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
YME1L1-209ENST00000613434 ERCC6Q03468 1493 aa13.79□□□□□ -0.2
YME1L1-209ENST00000613434 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
YME1L1-209ENST00000613434 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
YME1L1-209ENST00000613434 SLC24A1O60721 1099 aa13.78□□□□□ -0.2
YME1L1-209ENST00000613434 NEFMP07197 916 aa13.78□□□□□ -0.2
YME1L1-209ENST00000613434 ESF1Q9H501 851 aaKnown RBP13.78□□□□□ -0.2
YME1L1-209ENST00000613434 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.2
YME1L1-209ENST00000613434 SETD5Q9C0A6 1442 aa13.77□□□□□ -0.21
YME1L1-209ENST00000613434 RAB3GAP2Q9H2M9 1393 aa13.76□□□□□ -0.21
YME1L1-209ENST00000613434 ANP32AP39687 249 aaKnown RBP13.76□□□□□ -0.21
YME1L1-209ENST00000613434 FOXD1Q16676 465 aa13.75□□□□□ -0.21
YME1L1-209ENST00000613434 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
YME1L1-209ENST00000613434 ARHGAP35Q9NRY4 1499 aa13.73□□□□□ -0.21
YME1L1-209ENST00000613434 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
YME1L1-209ENST00000613434 WDR43Q15061 677 aaKnown RBP eCLIP13.72□□□□□ -0.21
YME1L1-209ENST00000613434 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
YME1L1-209ENST00000613434 SUPT16HQ9Y5B9 1047 aaKnown RBP13.72□□□□□ -0.21
YME1L1-209ENST00000613434 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.21
YME1L1-209ENST00000613434 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
YME1L1-209ENST00000613434 FMN1Q68DA7 1419 aa13.66□□□□□ -0.22
YME1L1-209ENST00000613434 DCAF11Q8TEB1 546 aa13.65□□□□□ -0.22
YME1L1-209ENST00000613434 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
YME1L1-209ENST00000613434 PKD2Q13563 968 aa13.62□□□□□ -0.23
YME1L1-209ENST00000613434 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
YME1L1-209ENST00000613434 MPHOSPH9Q99550 1183 aa13.62□□□□□ -0.23
YME1L1-209ENST00000613434 DHX57Q6P158 1386 aaKnown RBP13.61□□□□□ -0.23
YME1L1-209ENST00000613434 FANCD2Q9BXW9 1451 aa13.6□□□□□ -0.23
YME1L1-209ENST00000613434 IGF1RP08069 1367 aa13.6□□□□□ -0.23
YME1L1-209ENST00000613434 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
YME1L1-209ENST00000613434 KNSTRNQ9Y448 316 aa13.59□□□□□ -0.23
YME1L1-209ENST00000613434 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.58□□□□□ -0.24
YME1L1-209ENST00000613434 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
YME1L1-209ENST00000613434 NBR1Q14596 966 aa13.56□□□□□ -0.24
YME1L1-209ENST00000613434 L3MBTL2Q969R5 705 aa13.56□□□□□ -0.24
YME1L1-209ENST00000613434 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
YME1L1-209ENST00000613434 CARMIL2Q6F5E8 1435 aa13.54□□□□□ -0.24
YME1L1-209ENST00000613434 CCER2I3L3R5 266 aa13.54□□□□□ -0.24
YME1L1-209ENST00000613434 RAD54L2Q9Y4B4 1467 aa13.53□□□□□ -0.24
YME1L1-209ENST00000613434 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
YME1L1-209ENST00000613434 NUP155O75694 1391 aa13.53□□□□□ -0.24
YME1L1-209ENST00000613434 CDCA8Q53HL2 280 aa13.52□□□□□ -0.24
YME1L1-209ENST00000613434 TNNT2P45379 298 aaPredicted RBP13.52□□□□□ -0.25
YME1L1-209ENST00000613434 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
YME1L1-209ENST00000613434 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
YME1L1-209ENST00000613434 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
YME1L1-209ENST00000613434 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
YME1L1-209ENST00000613434 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
YME1L1-209ENST00000613434 KIF21BO75037 1637 aa13.48□□□□□ -0.25
YME1L1-209ENST00000613434 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
YME1L1-209ENST00000613434 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
YME1L1-209ENST00000613434 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
YME1L1-209ENST00000613434 PPP4R2Q9NY27 417 aa13.47□□□□□ -0.25
YME1L1-209ENST00000613434 TMF1P82094 1093 aa13.46□□□□□ -0.25
YME1L1-209ENST00000613434 ANKRD30AQ9BXX3 1397 aa13.46□□□□□ -0.25
YME1L1-209ENST00000613434 HSP90AA1P07900 732 aaKnown RBP13.45□□□□□ -0.26
YME1L1-209ENST00000613434 GGT6Q6P531 493 aa13.45□□□□□ -0.26
YME1L1-209ENST00000613434 PHLDB1Q86UU1 1377 aa13.44□□□□□ -0.26
YME1L1-209ENST00000613434 CFAP53Q96M91 514 aa13.44□□□□□ -0.26
YME1L1-209ENST00000613434 ARID4BQ4LE39 1312 aaPredicted RBP13.43□□□□□ -0.26
YME1L1-209ENST00000613434 EFCAB2Q5VUJ9 269 aa13.43□□□□□ -0.26
YME1L1-209ENST00000613434 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
YME1L1-209ENST00000613434 CCDC18Q5T9S5 1454 aa13.43□□□□□ -0.26
YME1L1-209ENST00000613434 SAFB2Q14151 953 aaKnown RBP eCLIP13.42□□□□□ -0.26
YME1L1-209ENST00000613434 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
YME1L1-209ENST00000613434 POGKQ9P215 609 aa13.41□□□□□ -0.26
YME1L1-209ENST00000613434 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
YME1L1-209ENST00000613434 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
YME1L1-209ENST00000613434 MLECQ14165 292 aa13.39□□□□□ -0.27
YME1L1-209ENST00000613434 C14orf37Q86TY3 774 aa13.39□□□□□ -0.27
YME1L1-209ENST00000613434 KANK1Q14678 1352 aa13.39□□□□□ -0.27
YME1L1-209ENST00000613434 CFTRP13569 1480 aa13.39□□□□□ -0.27
YME1L1-209ENST00000613434 FRAT1Q92837 279 aaPredicted RBP13.38□□□□□ -0.27
YME1L1-209ENST00000613434 ZBTB7CA1YPR0 619 aa13.37□□□□□ -0.27
YME1L1-209ENST00000613434 KIF3BO15066 747 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms