RNA–Protein interactions for RNA: ENST00000607607.5

LINC00240-204, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best) BASIC

Gene LINC00240, Length 5,607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-204ENST00000607607 ARID4BQ4LE39 1312 aaPredicted RBP7.91□□□□□ -1.14
LINC00240-204ENST00000607607 SLC4A3P48751 1232 aa7.91□□□□□ -1.14
LINC00240-204ENST00000607607 FRAT1Q92837 279 aaPredicted RBP7.91□□□□□ -1.14
LINC00240-204ENST00000607607 WRNQ14191 1432 aaPredicted RBP eCLIP7.91□□□□□ -1.14
LINC00240-204ENST00000607607 PPP1R15AO75807 674 aaPredicted RBP7.9□□□□□ -1.14
LINC00240-204ENST00000607607 FOXD1Q16676 465 aa7.9□□□□□ -1.14
LINC00240-204ENST00000607607 IPO9Q96P70 1041 aaKnown RBP7.9□□□□□ -1.14
LINC00240-204ENST00000607607 AAMPQ13685 434 aa7.9□□□□□ -1.15
LINC00240-204ENST00000607607 RUSC2Q8N2Y8 1516 aa7.9□□□□□ -1.15
LINC00240-204ENST00000607607 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
LINC00240-204ENST00000607607 FGD1P98174 961 aa7.88□□□□□ -1.15
LINC00240-204ENST00000607607 WDR97A6NE52 1622 aa7.87□□□□□ -1.15
LINC00240-204ENST00000607607 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
LINC00240-204ENST00000607607 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
LINC00240-204ENST00000607607 HNRNPUQ00839 825 aaKnown RBP eCLIP7.86□□□□□ -1.15
LINC00240-204ENST00000607607 RSF1Q96T23 1441 aaPredicted RBP7.86□□□□□ -1.15
LINC00240-204ENST00000607607 SOGA1O94964 1423 aa7.85□□□□□ -1.15
LINC00240-204ENST00000607607 ZBTB47Q9UFB7 747 aaPredicted RBP7.84□□□□□ -1.15
LINC00240-204ENST00000607607 RGS3P49796 1198 aa7.83□□□□□ -1.16
LINC00240-204ENST00000607607 CCDC88BA6NC98 1476 aa7.82□□□□□ -1.16
LINC00240-204ENST00000607607 PRDM4Q9UKN5 801 aa7.82□□□□□ -1.16
LINC00240-204ENST00000607607 PPP4R2Q9NY27 417 aa7.82□□□□□ -1.16
LINC00240-204ENST00000607607 AKNAQ7Z591 1439 aa7.81□□□□□ -1.16
LINC00240-204ENST00000607607 PDE4CQ08493 712 aa7.81□□□□□ -1.16
LINC00240-204ENST00000607607 GSE1Q14687 1217 aa7.8□□□□□ -1.16
LINC00240-204ENST00000607607 ARXQ96QS3 562 aa7.79□□□□□ -1.16
LINC00240-204ENST00000607607 MAPKBP1O60336 1514 aa7.79□□□□□ -1.16
LINC00240-204ENST00000607607 NFKBIBQ15653 356 aa7.77□□□□□ -1.16
LINC00240-204ENST00000607607 RSPH6AQ9H0K4 717 aa7.77□□□□□ -1.16
LINC00240-204ENST00000607607 ABCC9O60706 1549 aa7.77□□□□□ -1.17
LINC00240-204ENST00000607607 FRAT2O75474 233 aaPredicted RBP7.76□□□□□ -1.17
LINC00240-204ENST00000607607 UBTFP17480 764 aaKnown RBP7.76□□□□□ -1.17
LINC00240-204ENST00000607607 KANK4Q5T7N3 995 aaPredicted RBP7.76□□□□□ -1.17
LINC00240-204ENST00000607607 ANP32AP39687 249 aaKnown RBP7.75□□□□□ -1.17
LINC00240-204ENST00000607607 HSP90AA2PQ14568 343 aaPredicted RBP7.73□□□□□ -1.17
LINC00240-204ENST00000607607 FAM43AQ8N2R8 423 aa7.73□□□□□ -1.17
LINC00240-204ENST00000607607 CNGB1Q14028 1251 aaPredicted RBP7.72□□□□□ -1.17
LINC00240-204ENST00000607607 CHMP4BQ9H444 224 aaKnown RBP7.72□□□□□ -1.17
LINC00240-204ENST00000607607 POGKQ9P215 609 aa7.72□□□□□ -1.17
LINC00240-204ENST00000607607 PDIA4P13667 645 aaKnown RBP7.72□□□□□ -1.17
LINC00240-204ENST00000607607 ARID3AQ99856 593 aa7.72□□□□□ -1.17
LINC00240-204ENST00000607607 PANK2Q9BZ23 570 aa7.72□□□□□ -1.17
LINC00240-204ENST00000607607 FAM9BQ8IZU0 186 aa7.71□□□□□ -1.17
LINC00240-204ENST00000607607 NAP1L5Q96NT1 182 aaPredicted RBP7.71□□□□□ -1.18
LINC00240-204ENST00000607607 ANP32CO43423 234 aa7.71□□□□□ -1.18
LINC00240-204ENST00000607607 NCAPD3P42695 1498 aa7.71□□□□□ -1.18
LINC00240-204ENST00000607607 PAXIP1Q6ZW49 1069 aaPredicted RBP7.7□□□□□ -1.18
LINC00240-204ENST00000607607 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
LINC00240-204ENST00000607607 CCER2I3L3R5 266 aa7.7□□□□□ -1.18
LINC00240-204ENST00000607607 CLIP1P30622 1438 aa7.7□□□□□ -1.18
LINC00240-204ENST00000607607 GTF2E1P29083 439 aaPredicted RBP7.7□□□□□ -1.18
LINC00240-204ENST00000607607 TNIKQ9UKE5 1360 aa7.7□□□□□ -1.18
LINC00240-204ENST00000607607 EIF4G1Q04637 1599 aaKnown RBP7.68□□□□□ -1.18
LINC00240-204ENST00000607607 PEG3Q9GZU2 1588 aa7.68□□□□□ -1.18
LINC00240-204ENST00000607607 PDE4AP27815 886 aa7.68□□□□□ -1.18
LINC00240-204ENST00000607607 ZHX1Q9UKY1 873 aaPredicted RBP7.67□□□□□ -1.18
LINC00240-204ENST00000607607 PRDM10Q9NQV6 1147 aa7.67□□□□□ -1.18
LINC00240-204ENST00000607607 KLHL34Q8N239 644 aa7.65□□□□□ -1.18
LINC00240-204ENST00000607607 VGLL3A8MV65 326 aa7.65□□□□□ -1.18
LINC00240-204ENST00000607607 PLCD3Q8N3E9 789 aa7.65□□□□□ -1.18
LINC00240-204ENST00000607607 ZBTB22O15209 634 aa7.64□□□□□ -1.19
LINC00240-204ENST00000607607 BACH2Q9BYV9 841 aa7.64□□□□□ -1.19
LINC00240-204ENST00000607607 WIZO95785 1651 aa7.64□□□□□ -1.19
LINC00240-204ENST00000607607 CECR2Q9BXF3 1484 aa7.64□□□□□ -1.19
LINC00240-204ENST00000607607 EXOC6Q8TAG9 804 aa7.64□□□□□ -1.19
LINC00240-204ENST00000607607 BBXQ8WY36 941 aaPredicted RBP7.63□□□□□ -1.19
LINC00240-204ENST00000607607 RAB3GAP2Q9H2M9 1393 aa7.63□□□□□ -1.19
LINC00240-204ENST00000607607 USP35Q9P2H5 1018 aa7.63□□□□□ -1.19
LINC00240-204ENST00000607607 GLIPR1L2Q4G1C9 344 aa7.63□□□□□ -1.19
LINC00240-204ENST00000607607 HSP90AA1P07900 732 aaKnown RBP7.62□□□□□ -1.19
LINC00240-204ENST00000607607 STAC3Q96MF2 364 aa7.62□□□□□ -1.19
LINC00240-204ENST00000607607 MAPK8IP2Q13387 824 aaPredicted RBP7.62□□□□□ -1.19
LINC00240-204ENST00000607607 JARID2Q92833 1246 aaPredicted RBP7.62□□□□□ -1.19
LINC00240-204ENST00000607607 RRP9O43818 475 aaKnown RBP7.62□□□□□ -1.19
LINC00240-204ENST00000607607 NAP1L2Q9ULW6 460 aaPredicted RBP7.62□□□□□ -1.19
LINC00240-204ENST00000607607 ZNF830Q96NB3 372 aaPredicted RBP7.61□□□□□ -1.19
LINC00240-204ENST00000607607 XRCC6P12956 609 aaKnown RBP eCLIP7.6□□□□□ -1.19
LINC00240-204ENST00000607607 AMER1Q5JTC6 1135 aaPredicted RBP7.6□□□□□ -1.19
LINC00240-204ENST00000607607 PLIN1O60240 522 aa7.59□□□□□ -1.19
LINC00240-204ENST00000607607 MROH2BQ7Z745 1585 aa7.58□□□□□ -1.2
LINC00240-204ENST00000607607 EEA1Q15075 1411 aa7.58□□□□□ -1.2
LINC00240-204ENST00000607607 GZF1Q9H116 711 aaPredicted RBP7.58□□□□□ -1.2
LINC00240-204ENST00000607607 SCRIBQ14160 1630 aa7.57□□□□□ -1.2
LINC00240-204ENST00000607607 KIF21BO75037 1637 aa7.57□□□□□ -1.2
LINC00240-204ENST00000607607 RIPK4P57078 832 aa7.57□□□□□ -1.2
LINC00240-204ENST00000607607 VPS8Q8N3P4 1428 aa7.56□□□□□ -1.2
LINC00240-204ENST00000607607 DDRGK1Q96HY6 314 aa7.56□□□□□ -1.2
LINC00240-204ENST00000607607 PPM1GO15355 546 aaPredicted RBP7.56□□□□□ -1.2
LINC00240-204ENST00000607607 RNF123Q5XPI4 1314 aa7.56□□□□□ -1.2
LINC00240-204ENST00000607607 PNNQ9H307 717 aaKnown RBP7.55□□□□□ -1.2
LINC00240-204ENST00000607607 ZBED9Q6R2W3 1325 aa7.54□□□□□ -1.2
LINC00240-204ENST00000607607 TMEM51Q9NW97 253 aa7.54□□□□□ -1.2
LINC00240-204ENST00000607607 SEC24BO95487 1268 aa7.54□□□□□ -1.2
LINC00240-204ENST00000607607 CLCN1P35523 988 aa7.54□□□□□ -1.2
LINC00240-204ENST00000607607 MRS2Q9HD23 443 aa7.54□□□□□ -1.2
LINC00240-204ENST00000607607 KDM5BQ9UGL1 1544 aa7.53□□□□□ -1.2
LINC00240-204ENST00000607607 CALD1Q05682 793 aaKnown RBP7.53□□□□□ -1.2
LINC00240-204ENST00000607607 RAPGEF2Q9Y4G8 1499 aa7.53□□□□□ -1.2
LINC00240-204ENST00000607607 DHX37Q8IY37 1157 aaKnown RBP7.53□□□□□ -1.2
LINC00240-204ENST00000607607 C20orf194Q5TEA3 1177 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms