RNA–Protein interactions for RNA: ENST00000607607.5

LINC00240-204, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best) BASIC

Gene LINC00240, Length 5,607 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-204ENST00000607607 PPARGC1BQ86YN6 1023 aaKnown RBP10.18□□□□□ -0.78
LINC00240-204ENST00000607607 HRCP23327 699 aa9.96□□□□□ -0.82
LINC00240-204ENST00000607607 SCAF1Q9H7N4 1312 aaKnown RBP9.91□□□□□ -0.82
LINC00240-204ENST00000607607 PELP1Q8IZL8 1130 aaKnown RBP9.77□□□□□ -0.85
LINC00240-204ENST00000607607 PCGF6Q9BYE7 350 aa9.7□□□□□ -0.86
LINC00240-204ENST00000607607 MYO15BQ96JP2 1530 aa9.63□□□□□ -0.87
LINC00240-204ENST00000607607 FAM9AQ8IZU1 332 aaPredicted RBP9.46□□□□□ -0.9
LINC00240-204ENST00000607607 NEUROD1Q13562 356 aa9.43□□□□□ -0.9
LINC00240-204ENST00000607607 PRKCSHP14314 528 aaPredicted RBP9.42□□□□□ -0.9
LINC00240-204ENST00000607607 NISCHQ9Y2I1 1504 aa9.41□□□□□ -0.9
LINC00240-204ENST00000607607 BCL11AQ9H165 835 aa9.38□□□□□ -0.91
LINC00240-204ENST00000607607 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
LINC00240-204ENST00000607607 MYT1Q01538 1121 aa9.32□□□□□ -0.92
LINC00240-204ENST00000607607 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
LINC00240-204ENST00000607607 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
LINC00240-204ENST00000607607 LOC105371045A0A1W2PR82 267 aa9.18□□□□□ -0.94
LINC00240-204ENST00000607607 SHROOM4Q9ULL8 1493 aa9.17□□□□□ -0.94
LINC00240-204ENST00000607607 CSRNP3Q8WYN3 585 aa9.09□□□□□ -0.95
LINC00240-204ENST00000607607 CHIC1Q5VXU3 224 aa9.08□□□□□ -0.96
LINC00240-204ENST00000607607 YTHDC1Q96MU7 727 aaKnown RBP9.01□□□□□ -0.97
LINC00240-204ENST00000607607 TRIM26Q12899 539 aaPredicted RBP8.98□□□□□ -0.97
LINC00240-204ENST00000607607 CCDC180Q9P1Z9 1646 aa8.95□□□□□ -0.98
LINC00240-204ENST00000607607 CENPBP07199 599 aaPredicted RBP8.93□□□□□ -0.98
LINC00240-204ENST00000607607 ANP32EQ9BTT0 268 aa8.93□□□□□ -0.98
LINC00240-204ENST00000607607 DCAF1Q9Y4B6 1507 aa8.93□□□□□ -0.98
LINC00240-204ENST00000607607 ANO8Q9HCE9 1232 aaPredicted RBP8.92□□□□□ -0.98
LINC00240-204ENST00000607607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.88□□□□□ -0.99
LINC00240-204ENST00000607607 DIEXFQ68CQ4 756 aaKnown RBP8.87□□□□□ -0.99
LINC00240-204ENST00000607607 TSHZ2Q9NRE2 1034 aa8.86□□□□□ -0.99
LINC00240-204ENST00000607607 TTBK1Q5TCY1 1321 aaPredicted RBP8.83□□□□□ -1
LINC00240-204ENST00000607607 ZEB1P37275 1124 aaPredicted RBP8.83□□□□□ -1
LINC00240-204ENST00000607607 APLP2Q06481 763 aa8.82□□□□□ -1
LINC00240-204ENST00000607607 EHMT2Q96KQ7 1210 aa8.81□□□□□ -1
LINC00240-204ENST00000607607 CCDC136Q96JN2 1154 aa8.8□□□□□ -1
LINC00240-204ENST00000607607 MIER1Q8N108 512 aa8.77□□□□□ -1.01
LINC00240-204ENST00000607607 SUPT16HQ9Y5B9 1047 aaKnown RBP8.75□□□□□ -1.01
LINC00240-204ENST00000607607 SALL2Q9Y467 1007 aaPredicted RBP8.74□□□□□ -1.01
LINC00240-204ENST00000607607 MSH5O43196 834 aa8.73□□□□□ -1.01
LINC00240-204ENST00000607607 TRIM41Q8WV44 630 aa8.69□□□□□ -1.02
LINC00240-204ENST00000607607 BCANQ96GW7 911 aa8.66□□□□□ -1.02
LINC00240-204ENST00000607607 CCER1Q8TC90 406 aaPredicted RBP8.63□□□□□ -1.03
LINC00240-204ENST00000607607 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
LINC00240-204ENST00000607607 PLEKHG5O94827 1062 aa8.6□□□□□ -1.03
LINC00240-204ENST00000607607 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
LINC00240-204ENST00000607607 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
LINC00240-204ENST00000607607 ITGAEP38570 1179 aa8.56□□□□□ -1.04
LINC00240-204ENST00000607607 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
LINC00240-204ENST00000607607 RTN4Q9NQC3 1192 aaKnown RBP8.53□□□□□ -1.04
LINC00240-204ENST00000607607 ZNF316A6NFI3 1004 aaPredicted RBP8.51□□□□□ -1.05
LINC00240-204ENST00000607607 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
LINC00240-204ENST00000607607 DEKP35659 375 aaKnown RBP8.47□□□□□ -1.05
LINC00240-204ENST00000607607 UBE2Q2Q8WVN8 375 aa8.44□□□□□ -1.06
LINC00240-204ENST00000607607 FKBP8Q14318 412 aa8.39□□□□□ -1.07
LINC00240-204ENST00000607607 NBR1Q14596 966 aa8.37□□□□□ -1.07
LINC00240-204ENST00000607607 PAK3O75914 559 aaPredicted RBP8.34□□□□□ -1.07
LINC00240-204ENST00000607607 AEBP2Q6ZN18 517 aaPredicted RBP8.32□□□□□ -1.08
LINC00240-204ENST00000607607 IRX6P78412 446 aaPredicted RBP8.31□□□□□ -1.08
LINC00240-204ENST00000607607 TIMELESSQ9UNS1 1208 aa8.29□□□□□ -1.08
LINC00240-204ENST00000607607 PKNOX2Q96KN3 472 aa8.29□□□□□ -1.08
LINC00240-204ENST00000607607 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
LINC00240-204ENST00000607607 EIF5BO60841 1220 aaKnown RBP8.28□□□□□ -1.08
LINC00240-204ENST00000607607 TRIM52Q96A61 297 aa8.21□□□□□ -1.1
LINC00240-204ENST00000607607 HNRNPUL2Q1KMD3 747 aaKnown RBP8.2□□□□□ -1.1
LINC00240-204ENST00000607607 FANCIQ9NVI1 1328 aa8.18□□□□□ -1.1
LINC00240-204ENST00000607607 PODXL2Q9NZ53 605 aa8.18□□□□□ -1.1
LINC00240-204ENST00000607607 BRPF3Q9ULD4 1205 aa8.18□□□□□ -1.1
LINC00240-204ENST00000607607 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
LINC00240-204ENST00000607607 HIRIP3Q9BW71 556 aaPredicted RBP8.12□□□□□ -1.11
LINC00240-204ENST00000607607 SLC24A1O60721 1099 aa8.11□□□□□ -1.11
LINC00240-204ENST00000607607 DCAF8L2P0C7V8 631 aa8.11□□□□□ -1.11
LINC00240-204ENST00000607607 BAZ1BQ9UIG0 1483 aaKnown RBP8.1□□□□□ -1.11
LINC00240-204ENST00000607607 A0A0U1RQG5 324 aaPredicted RBP8.09□□□□□ -1.11
LINC00240-204ENST00000607607 CLSPNQ9HAW4 1339 aa8.08□□□□□ -1.12
LINC00240-204ENST00000607607 ERICH6BQ5W0A0 696 aa8.08□□□□□ -1.12
LINC00240-204ENST00000607607 ZCCHC6Q5VYS8 1495 aaKnown RBP8.07□□□□□ -1.12
LINC00240-204ENST00000607607 NOP58Q9Y2X3 529 aaKnown RBP8.06□□□□□ -1.12
LINC00240-204ENST00000607607 B4GALNT3Q6L9W6 998 aa8.06□□□□□ -1.12
LINC00240-204ENST00000607607 SIN3AQ96ST3 1273 aa8.05□□□□□ -1.12
LINC00240-204ENST00000607607 VSIG10Q8N0Z9 540 aa8.04□□□□□ -1.12
LINC00240-204ENST00000607607 RB1CC1Q8TDY2 1594 aa8.04□□□□□ -1.12
LINC00240-204ENST00000607607 LAS1LQ9Y4W2 734 aaKnown RBP8.04□□□□□ -1.12
LINC00240-204ENST00000607607 NACADO15069 1562 aa8.03□□□□□ -1.12
LINC00240-204ENST00000607607 DDX10Q13206 875 aaKnown RBP8.03□□□□□ -1.12
LINC00240-204ENST00000607607 SENP3-EIF4A1A0A087X0R7 540 aa8.01□□□□□ -1.13
LINC00240-204ENST00000607607 DCAF11Q8TEB1 546 aa8□□□□□ -1.13
LINC00240-204ENST00000607607 CDK11AQ9UQ88 783 aaPredicted RBP7.99□□□□□ -1.13
LINC00240-204ENST00000607607 WASHC2AQ641Q2 1341 aa7.99□□□□□ -1.13
LINC00240-204ENST00000607607 SKAP1Q86WV1 359 aa7.96□□□□□ -1.14
LINC00240-204ENST00000607607 DHX57Q6P158 1386 aaKnown RBP7.95□□□□□ -1.14
LINC00240-204ENST00000607607 CCDC184Q52MB2 194 aa7.95□□□□□ -1.14
LINC00240-204ENST00000607607 NEFLP07196 543 aa7.94□□□□□ -1.14
LINC00240-204ENST00000607607 RBM10P98175 930 aaKnown RBP7.94□□□□□ -1.14
LINC00240-204ENST00000607607 CEP162Q5TB80 1403 aa7.94□□□□□ -1.14
LINC00240-204ENST00000607607 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
LINC00240-204ENST00000607607 NEFMP07197 916 aa7.92□□□□□ -1.14
LINC00240-204ENST00000607607 ABCC8Q09428 1581 aa7.92□□□□□ -1.14
LINC00240-204ENST00000607607 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
LINC00240-204ENST00000607607 NPM2Q86SE8 214 aaKnown RBP7.91□□□□□ -1.14
LINC00240-204ENST00000607607 RRAGDQ9NQL2 400 aaPredicted RBP7.91□□□□□ -1.14
LINC00240-204ENST00000607607 DAXXQ9UER7 740 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 520.5 ms