RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 FAM9BQ8IZU0 186 aa9.16□□□□□ -0.94
RPF2-204ENST00000607388 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
RPF2-204ENST00000607388 RAPGEF2Q9Y4G8 1499 aa9.14□□□□□ -0.95
RPF2-204ENST00000607388 RRP7BPQ9NSQ0 103 aa9.11□□□□□ -0.95
RPF2-204ENST00000607388 FANCD2Q9BXW9 1451 aa9.1□□□□□ -0.95
RPF2-204ENST00000607388 FBLN2P98095 1184 aa9.1□□□□□ -0.95
RPF2-204ENST00000607388 PDS5BQ9NTI5 1447 aa9.09□□□□□ -0.95
RPF2-204ENST00000607388 FOXD1Q16676 465 aa9.09□□□□□ -0.95
RPF2-204ENST00000607388 NBR1Q14596 966 aa9.08□□□□□ -0.96
RPF2-204ENST00000607388 DHX57Q6P158 1386 aaKnown RBP9.08□□□□□ -0.96
RPF2-204ENST00000607388 CFTRP13569 1480 aa9.07□□□□□ -0.96
RPF2-204ENST00000607388 VPS8Q8N3P4 1428 aa9.07□□□□□ -0.96
RPF2-204ENST00000607388 ANP32EQ9BTT0 268 aa9.06□□□□□ -0.96
RPF2-204ENST00000607388 CEP164Q9UPV0 1460 aa9.06□□□□□ -0.96
RPF2-204ENST00000607388 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
RPF2-204ENST00000607388 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
RPF2-204ENST00000607388 B4GALNT3Q6L9W6 998 aa9.04□□□□□ -0.96
RPF2-204ENST00000607388 RAB3GAP2Q9H2M9 1393 aa9.03□□□□□ -0.96
RPF2-204ENST00000607388 TONSLQ96HA7 1378 aa9.03□□□□□ -0.96
RPF2-204ENST00000607388 CDK11AQ9UQ88 783 aaPredicted RBP9.02□□□□□ -0.97
RPF2-204ENST00000607388 ZNF777Q9ULD5 760 aaPredicted RBP9.02□□□□□ -0.97
RPF2-204ENST00000607388 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.97
RPF2-204ENST00000607388 CCNB3Q8WWL7 1395 aa9.02□□□□□ -0.97
RPF2-204ENST00000607388 BCL11AQ9H165 835 aa9□□□□□ -0.97
RPF2-204ENST00000607388 EEA1Q15075 1411 aa8.99□□□□□ -0.97
RPF2-204ENST00000607388 RAD54L2Q9Y4B4 1467 aa8.99□□□□□ -0.97
RPF2-204ENST00000607388 MRS2Q9HD23 443 aa8.98□□□□□ -0.97
RPF2-204ENST00000607388 LAMC3Q9Y6N6 1575 aa8.97□□□□□ -0.97
RPF2-204ENST00000607388 KDM2AQ9Y2K7 1162 aa8.96□□□□□ -0.98
RPF2-204ENST00000607388 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
RPF2-204ENST00000607388 SYNJ1O43426 1573 aa8.95□□□□□ -0.98
RPF2-204ENST00000607388 KIF21AQ7Z4S6 1674 aa8.95□□□□□ -0.98
RPF2-204ENST00000607388 CCDC184Q52MB2 194 aa8.94□□□□□ -0.98
RPF2-204ENST00000607388 AQRO60306 1485 aaKnown RBP eCLIP8.94□□□□□ -0.984e-7■■■■■ 35.4
RPF2-204ENST00000607388 SENP3Q9H4L4 574 aaPredicted RBP8.93□□□□□ -0.98
RPF2-204ENST00000607388 RTN4Q9NQC3 1192 aaKnown RBP8.93□□□□□ -0.98
RPF2-204ENST00000607388 MRC2Q9UBG0 1479 aa8.93□□□□□ -0.98
RPF2-204ENST00000607388 KIF21BO75037 1637 aa8.92□□□□□ -0.98
RPF2-204ENST00000607388 FGD5Q6ZNL6 1462 aa8.92□□□□□ -0.98
RPF2-204ENST00000607388 TOPBP1Q92547 1522 aa8.92□□□□□ -0.98
RPF2-204ENST00000607388 ARAP1Q96P48 1450 aa8.92□□□□□ -0.98
RPF2-204ENST00000607388 MTUS2Q5JR59 1369 aa8.92□□□□□ -0.98
RPF2-204ENST00000607388 CUX1P39880 1505 aa8.92□□□□□ -0.98
RPF2-204ENST00000607388 PPP1R15AO75807 674 aaPredicted RBP8.92□□□□□ -0.98
RPF2-204ENST00000607388 CUX2O14529 1486 aa8.91□□□□□ -0.98
RPF2-204ENST00000607388 HSPA5P11021 654 aaKnown RBP8.91□□□□□ -0.98
RPF2-204ENST00000607388 KIF27Q86VH2 1401 aa8.9□□□□□ -0.98
RPF2-204ENST00000607388 CHMP7Q8WUX9 453 aaPredicted RBP8.9□□□□□ -0.98
RPF2-204ENST00000607388 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.99
RPF2-204ENST00000607388 POLA1P09884 1462 aaPredicted RBP8.89□□□□□ -0.99
RPF2-204ENST00000607388 FHOD3Q2V2M9 1422 aa8.89□□□□□ -0.99
RPF2-204ENST00000607388 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
RPF2-204ENST00000607388 PHLDB1Q86UU1 1377 aa8.88□□□□□ -0.99
RPF2-204ENST00000607388 NCBP3Q53F19 620 aaKnown RBP8.88□□□□□ -0.99
RPF2-204ENST00000607388 PLPPR3Q6T4P5 718 aa8.88□□□□□ -0.99
RPF2-204ENST00000607388 CARMIL1Q5VZK9 1371 aa8.87□□□□□ -0.99
RPF2-204ENST00000607388 EIF5BO60841 1220 aaKnown RBP8.87□□□□□ -0.99
RPF2-204ENST00000607388 MSH5O43196 834 aa8.87□□□□□ -0.99
RPF2-204ENST00000607388 CCDC136Q96JN2 1154 aa8.87□□□□□ -0.99
RPF2-204ENST00000607388 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.995e-8■■■■□ 20.5
RPF2-204ENST00000607388 SLC4A1APQ9BWU0 796 aaKnown RBP8.86□□□□□ -0.99
RPF2-204ENST00000607388 RGL3Q3MIN7 710 aa8.85□□□□□ -0.99
RPF2-204ENST00000607388 CLSPNQ9HAW4 1339 aa8.85□□□□□ -0.99
RPF2-204ENST00000607388 LAS1LQ9Y4W2 734 aaKnown RBP8.85□□□□□ -0.99
RPF2-204ENST00000607388 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
RPF2-204ENST00000607388 RTL5Q5HYW3 569 aaPredicted RBP8.84□□□□□ -0.99
RPF2-204ENST00000607388 L3MBTL2Q969R5 705 aa8.84□□□□□ -1
RPF2-204ENST00000607388 MYT1LQ9UL68 1186 aa8.84□□□□□ -1
RPF2-204ENST00000607388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.83□□□□□ -17e-7■■□□□ 12.8
RPF2-204ENST00000607388 ARXQ96QS3 562 aa8.83□□□□□ -1
RPF2-204ENST00000607388 TMC1Q8TDI8 760 aa8.82□□□□□ -1
RPF2-204ENST00000607388 DNMBPQ6XZF7 1577 aa8.82□□□□□ -1
RPF2-204ENST00000607388 SKAP1Q86WV1 359 aa8.81□□□□□ -1
RPF2-204ENST00000607388 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
RPF2-204ENST00000607388 ARHGAP35Q9NRY4 1499 aa8.8□□□□□ -1
RPF2-204ENST00000607388 DEKP35659 375 aaKnown RBP8.79□□□□□ -1
RPF2-204ENST00000607388 THOC2Q8NI27 1593 aaKnown RBP8.79□□□□□ -1
RPF2-204ENST00000607388 GAPVD1Q14C86 1478 aa8.79□□□□□ -1
RPF2-204ENST00000607388 WASHC2AQ641Q2 1341 aa8.79□□□□□ -1
RPF2-204ENST00000607388 ZNF644Q9H582 1327 aaPredicted RBP8.79□□□□□ -1
RPF2-204ENST00000607388 IGF1RP08069 1367 aa8.78□□□□□ -1
RPF2-204ENST00000607388 WDR62O43379 1518 aa8.78□□□□□ -1
RPF2-204ENST00000607388 PAK3O75914 559 aaPredicted RBP8.78□□□□□ -1
RPF2-204ENST00000607388 TOP2BQ02880 1626 aa8.78□□□□□ -1
RPF2-204ENST00000607388 ANP32AP39687 249 aaKnown RBP8.78□□□□□ -1
RPF2-204ENST00000607388 IFT140Q96RY7 1462 aa8.77□□□□□ -1.01
RPF2-204ENST00000607388 PPP4R2Q9NY27 417 aa8.77□□□□□ -1.01
RPF2-204ENST00000607388 CCER2I3L3R5 266 aa8.76□□□□□ -1.01
RPF2-204ENST00000607388 MPHOSPH9Q99550 1183 aa8.76□□□□□ -1.01
RPF2-204ENST00000607388 CC2D1BQ5T0F9 858 aaKnown RBP8.76□□□□□ -1.01
RPF2-204ENST00000607388 ZBTB47Q9UFB7 747 aaPredicted RBP8.76□□□□□ -1.01
RPF2-204ENST00000607388 PLIN1O60240 522 aa8.75□□□□□ -1.01
RPF2-204ENST00000607388 SLC4A3P48751 1232 aa8.75□□□□□ -1.01
RPF2-204ENST00000607388 OSCARQ8IYS5 282 aa8.74□□□□□ -1.01
RPF2-204ENST00000607388 SNAPC4Q5SXM2 1469 aa8.74□□□□□ -1.01
RPF2-204ENST00000607388 PRKRIP1Q9H875 184 aaPredicted RBP8.73□□□□□ -1.01
RPF2-204ENST00000607388 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.73□□□□□ -1.01
RPF2-204ENST00000607388 NBPF8Q3BBV2 869 aa8.73□□□□□ -1.01
RPF2-204ENST00000607388 RRBP1Q9P2E9 1410 aaKnown RBP8.72□□□□□ -1.01
RPF2-204ENST00000607388 NOP58Q9Y2X3 529 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms