RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
HLA-F-230ENST00000606273 URB2Q14146 1524 aaKnown RBP23.49■■□□□ 1.35
HLA-F-230ENST00000606273 MKRN4PQ13434 485 aaPredicted RBP23.46■■□□□ 1.35
HLA-F-230ENST00000606273 REM2Q8IYK8 340 aaPredicted RBP23.43■■□□□ 1.34
HLA-F-230ENST00000606273 WIZO95785 1651 aa23.42■■□□□ 1.34
HLA-F-230ENST00000606273 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
HLA-F-230ENST00000606273 SPDYE2BA6NHP3 402 aa23.33■■□□□ 1.33
HLA-F-230ENST00000606273 SPDYE6P0CI01 402 aa23.33■■□□□ 1.33
HLA-F-230ENST00000606273 SPDYE2Q495Y8 402 aa23.33■■□□□ 1.33
HLA-F-230ENST00000606273 IFT140Q96RY7 1462 aa23.28■■□□□ 1.32
HLA-F-230ENST00000606273 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
HLA-F-230ENST00000606273 PITPNM1O00562 1244 aa23.17■■□□□ 1.3
HLA-F-230ENST00000606273 ZNF692Q9BU19 519 aaPredicted RBP23.12■■□□□ 1.29
HLA-F-230ENST00000606273 RSF1Q96T23 1441 aaPredicted RBP23.1■■□□□ 1.29
HLA-F-230ENST00000606273 TOPBP1Q92547 1522 aa23.08■■□□□ 1.29
HLA-F-230ENST00000606273 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.28
HLA-F-230ENST00000606273 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.28
HLA-F-230ENST00000606273 SSUH2Q9Y2M2 353 aa23.05■■□□□ 1.28
HLA-F-230ENST00000606273 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
HLA-F-230ENST00000606273 PIP4P2Q8N4L2 257 aa23.02■■□□□ 1.28
HLA-F-230ENST00000606273 ABCC8Q09428 1581 aa22.99■■□□□ 1.27
HLA-F-230ENST00000606273 CHD1O14646 1710 aa22.96■■□□□ 1.27
HLA-F-230ENST00000606273 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
HLA-F-230ENST00000606273 FXR2P51116 673 aaKnown RBP eCLIP22.91■■□□□ 1.26
HLA-F-230ENST00000606273 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
HLA-F-230ENST00000606273 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
HLA-F-230ENST00000606273 SPDYE1Q8NFV5 336 aaPredicted RBP22.87■■□□□ 1.25
HLA-F-230ENST00000606273 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
HLA-F-230ENST00000606273 CLEC11AQ9Y240 323 aa22.85■■□□□ 1.25
HLA-F-230ENST00000606273 TDRD9Q8NDG6 1382 aaKnown RBP22.83■■□□□ 1.25
HLA-F-230ENST00000606273 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
HLA-F-230ENST00000606273 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
HLA-F-230ENST00000606273 CLASP1Q7Z460 1538 aa22.79■■□□□ 1.24
HLA-F-230ENST00000606273 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
HLA-F-230ENST00000606273 SOGA1O94964 1423 aa22.75■■□□□ 1.23
HLA-F-230ENST00000606273 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
HLA-F-230ENST00000606273 SYNJ1O43426 1573 aa22.68■■□□□ 1.22
HLA-F-230ENST00000606273 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
HLA-F-230ENST00000606273 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
HLA-F-230ENST00000606273 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
HLA-F-230ENST00000606273 GRIN2BQ13224 1484 aa22.59■■□□□ 1.21
HLA-F-230ENST00000606273 PRKAR2AP13861 404 aaKnown RBP22.58■■□□□ 1.21
HLA-F-230ENST00000606273 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
HLA-F-230ENST00000606273 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
HLA-F-230ENST00000606273 HAX1O00165 279 aa22.54■■□□□ 1.2
HLA-F-230ENST00000606273 PRR29P0C7W0 189 aa22.5■■□□□ 1.19
HLA-F-230ENST00000606273 SPDYE4A6NLX3 237 aa22.48■■□□□ 1.19
HLA-F-230ENST00000606273 ILDR1Q86SU0 546 aaPredicted RBP22.46■■□□□ 1.19
HLA-F-230ENST00000606273 SP7Q8TDD2 431 aaPredicted RBP22.46■■□□□ 1.19
HLA-F-230ENST00000606273 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
HLA-F-230ENST00000606273 CHADLQ6NUI6 762 aa22.4■■□□□ 1.18
HLA-F-230ENST00000606273 CUX1P39880 1505 aa22.4■■□□□ 1.18
HLA-F-230ENST00000606273 KDM4FA0A1W2PPD8 638 aa22.35■■□□□ 1.17
HLA-F-230ENST00000606273 EVX2Q03828 476 aa22.3■■□□□ 1.16
HLA-F-230ENST00000606273 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
HLA-F-230ENST00000606273 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
HLA-F-230ENST00000606273 FAM69CQ0P6D2 419 aa22.28■■□□□ 1.16
HLA-F-230ENST00000606273 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
HLA-F-230ENST00000606273 NUP160Q12769 1436 aa22.26■■□□□ 1.15
HLA-F-230ENST00000606273 ABCA10Q8WWZ4 1543 aa22.25■■□□□ 1.15
HLA-F-230ENST00000606273 KIF13AQ9H1H9 1805 aa22.23■■□□□ 1.15
HLA-F-230ENST00000606273 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
HLA-F-230ENST00000606273 STAG3Q9UJ98 1225 aa22.19■■□□□ 1.14
HLA-F-230ENST00000606273 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
HLA-F-230ENST00000606273 C19orf67A6NJJ6 358 aa22.17■■□□□ 1.14
HLA-F-230ENST00000606273 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
HLA-F-230ENST00000606273 NPM1P06748 294 aaKnown RBP eCLIP22.16■■□□□ 1.14
HLA-F-230ENST00000606273 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
HLA-F-230ENST00000606273 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.14
HLA-F-230ENST00000606273 FHAD1B1AJZ9 1412 aa22.11■■□□□ 1.13
HLA-F-230ENST00000606273 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
HLA-F-230ENST00000606273 FARP1Q9Y4F1 1045 aaPredicted RBP22.07■■□□□ 1.12
HLA-F-230ENST00000606273 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
HLA-F-230ENST00000606273 MAPKBP1O60336 1514 aa22.04■■□□□ 1.12
HLA-F-230ENST00000606273 KDM6BO15054 1643 aa22.02■■□□□ 1.11
HLA-F-230ENST00000606273 DIP2BQ9P265 1576 aa22■■□□□ 1.11
HLA-F-230ENST00000606273 CREBZFQ9NS37 354 aa22■■□□□ 1.11
HLA-F-230ENST00000606273 PROM2Q8N271 834 aa21.95■■□□□ 1.1
HLA-F-230ENST00000606273 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
HLA-F-230ENST00000606273 ADCY10Q96PN6 1610 aa21.88■■□□□ 1.09
HLA-F-230ENST00000606273 CD44P16070 742 aaKnown RBP21.87■■□□□ 1.09
HLA-F-230ENST00000606273 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
HLA-F-230ENST00000606273 TSPOAP1O95153 1857 aa21.81■■□□□ 1.08
HLA-F-230ENST00000606273 GABBR2O75899 941 aa21.79■■□□□ 1.08
HLA-F-230ENST00000606273 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
HLA-F-230ENST00000606273 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
HLA-F-230ENST00000606273 HECW2Q9P2P5 1572 aa21.76■■□□□ 1.07
HLA-F-230ENST00000606273 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
HLA-F-230ENST00000606273 KIAA0586Q9BVV6 1533 aa21.72■■□□□ 1.07
HLA-F-230ENST00000606273 PTPRGP23470 1445 aa21.72■■□□□ 1.07
HLA-F-230ENST00000606273 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
HLA-F-230ENST00000606273 FBXO41Q8TF61 875 aa21.69■■□□□ 1.06
HLA-F-230ENST00000606273 TTBK1Q5TCY1 1321 aaPredicted RBP21.68■■□□□ 1.06
HLA-F-230ENST00000606273 ASXL2Q76L83 1435 aa21.67■■□□□ 1.06
HLA-F-230ENST00000606273 PLB1Q6P1J6 1458 aa21.65■■□□□ 1.06
HLA-F-230ENST00000606273 GLI2P10070 1586 aa21.65■■□□□ 1.06
HLA-F-230ENST00000606273 MNX1P50219 401 aaPredicted RBP21.64■■□□□ 1.05
HLA-F-230ENST00000606273 ABCC2Q92887 1545 aa21.64■■□□□ 1.05
HLA-F-230ENST00000606273 FKBP8Q14318 412 aa21.63■■□□□ 1.05
HLA-F-230ENST00000606273 PPRC1Q5VV67 1664 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms