RNA–Protein interactions for RNA: ENST00000602795.5

NELFCD-213, Transcript of negative elongation factor complex member C/D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NELFCD, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-213ENST00000602795 DNMBPQ6XZF7 1577 aa31.86■■■□□ 2.69
NELFCD-213ENST00000602795 TOPBP1Q92547 1522 aa31.85■■■□□ 2.69
NELFCD-213ENST00000602795 LRRC9Q6ZRR7 1453 aa31.82■■■□□ 2.68
NELFCD-213ENST00000602795 PCF11O94913 1555 aaKnown RBP31.81■■■□□ 2.68
NELFCD-213ENST00000602795 PHLDB1Q86UU1 1377 aa31.81■■■□□ 2.68
NELFCD-213ENST00000602795 ABCA10Q8WWZ4 1543 aa31.79■■■□□ 2.68
NELFCD-213ENST00000602795 ATP1B4Q9UN42 357 aaPredicted RBP31.78■■■□□ 2.68
NELFCD-213ENST00000602795 FHOD3Q2V2M9 1422 aa31.78■■■□□ 2.68
NELFCD-213ENST00000602795 RAB3GAP2Q9H2M9 1393 aa31.77■■■□□ 2.68
NELFCD-213ENST00000602795 MAP3K1Q13233 1512 aa31.76■■■□□ 2.68
NELFCD-213ENST00000602795 CFAP43Q8NDM7 1665 aa31.7■■■□□ 2.67
NELFCD-213ENST00000602795 FHAD1B1AJZ9 1412 aa31.68■■■□□ 2.66
NELFCD-213ENST00000602795 MAPKBP1O60336 1514 aa31.67■■■□□ 2.66
NELFCD-213ENST00000602795 FAM50AQ14320 339 aaKnown RBP31.67■■■□□ 2.66
NELFCD-213ENST00000602795 URB2Q14146 1524 aaKnown RBP31.66■■■□□ 2.66
NELFCD-213ENST00000602795 CTTNBP2Q8WZ74 1663 aa31.59■■■□□ 2.65
NELFCD-213ENST00000602795 CUL7Q14999 1698 aa31.59■■■□□ 2.65
NELFCD-213ENST00000602795 SETD5Q9C0A6 1442 aa31.57■■■□□ 2.65
NELFCD-213ENST00000602795 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
NELFCD-213ENST00000602795 WDR97A6NE52 1622 aa31.56■■■□□ 2.64
NELFCD-213ENST00000602795 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
NELFCD-213ENST00000602795 PELP1Q8IZL8 1130 aaKnown RBP31.53■■■□□ 2.64
NELFCD-213ENST00000602795 FYCO1Q9BQS8 1478 aa31.53■■■□□ 2.64
NELFCD-213ENST00000602795 EFCAB5A4FU69 1503 aa31.52■■■□□ 2.64
NELFCD-213ENST00000602795 CASKIN1Q8WXD9 1431 aa31.51■■■□□ 2.63
NELFCD-213ENST00000602795 SIN3AQ96ST3 1273 aa31.49■■■□□ 2.63
NELFCD-213ENST00000602795 ABCA5Q8WWZ7 1642 aa31.44■■■□□ 2.62
NELFCD-213ENST00000602795 SNAPC4Q5SXM2 1469 aa31.42■■■□□ 2.62
NELFCD-213ENST00000602795 LRRIQ1Q96JM4 1722 aa31.41■■■□□ 2.62
NELFCD-213ENST00000602795 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.622e-7■■■■□ 23.4
NELFCD-213ENST00000602795 KIF21AQ7Z4S6 1674 aa31.39■■■□□ 2.62
NELFCD-213ENST00000602795 PDS5BQ9NTI5 1447 aa31.39■■■□□ 2.62
NELFCD-213ENST00000602795 GAPVD1Q14C86 1478 aa31.39■■■□□ 2.62
NELFCD-213ENST00000602795 FMN1Q68DA7 1419 aa31.34■■■□□ 2.61
NELFCD-213ENST00000602795 SAMD9Q5K651 1589 aa31.32■■■□□ 2.6
NELFCD-213ENST00000602795 FGD6Q6ZV73 1430 aa31.3■■■□□ 2.6
NELFCD-213ENST00000602795 MTUS2Q5JR59 1369 aa31.27■■■□□ 2.6
NELFCD-213ENST00000602795 PTPRKQ15262 1439 aa31.26■■■□□ 2.59
NELFCD-213ENST00000602795 KCNH8Q96L42 1107 aa31.25■■■□□ 2.59
NELFCD-213ENST00000602795 TARBP1Q13395 1621 aaKnown RBP31.22■■■□□ 2.59
NELFCD-213ENST00000602795 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
NELFCD-213ENST00000602795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.2■■■□□ 2.59
NELFCD-213ENST00000602795 HIRIP3Q9BW71 556 aaPredicted RBP31.19■■■□□ 2.58
NELFCD-213ENST00000602795 NCOA2Q15596 1464 aa31.17■■■□□ 2.58
NELFCD-213ENST00000602795 MAGI3Q5TCQ9 1506 aa31.14■■■□□ 2.57
NELFCD-213ENST00000602795 CCDC18Q5T9S5 1454 aa31.12■■■□□ 2.57
NELFCD-213ENST00000602795 DDX10Q13206 875 aaKnown RBP31.1■■■□□ 2.57
NELFCD-213ENST00000602795 MYOM3Q5VTT5 1437 aa31.08■■■□□ 2.57
NELFCD-213ENST00000602795 PBRM1Q86U86 1689 aa31.08■■■□□ 2.57
NELFCD-213ENST00000602795 PTPN23Q9H3S7 1636 aa31.07■■■□□ 2.57
NELFCD-213ENST00000602795 SUPT6HQ7KZ85 1726 aaKnown RBP31.06■■■□□ 2.56
NELFCD-213ENST00000602795 PPP1R15AO75807 674 aaPredicted RBP31.06■■■□□ 2.56
NELFCD-213ENST00000602795 HFM1A2PYH4 1435 aa31.05■■■□□ 2.56
NELFCD-213ENST00000602795 ARID3CA6NKF2 412 aa31.04■■■□□ 2.56
NELFCD-213ENST00000602795 NAIPQ13075 1403 aa31.02■■■□□ 2.56
NELFCD-213ENST00000602795 EHBP1L1Q8N3D4 1523 aa31.02■■■□□ 2.56
NELFCD-213ENST00000602795 THOC2Q8NI27 1593 aaKnown RBP31.01■■■□□ 2.55
NELFCD-213ENST00000602795 UGGT2Q9NYU1 1516 aa30.99■■■□□ 2.55
NELFCD-213ENST00000602795 UACAQ9BZF9 1416 aa30.97■■■□□ 2.55
NELFCD-213ENST00000602795 ARHGEF11O15085 1522 aa30.95■■■□□ 2.55
NELFCD-213ENST00000602795 ADAMTS12P58397 1594 aa30.95■■■□□ 2.55
NELFCD-213ENST00000602795 CHIC2Q9UKJ5 165 aa30.95■■■□□ 2.55
NELFCD-213ENST00000602795 TIMELESSQ9UNS1 1208 aa30.95■■■□□ 2.55
NELFCD-213ENST00000602795 IQGAP2Q13576 1575 aa30.95■■■□□ 2.54
NELFCD-213ENST00000602795 MRC2Q9UBG0 1479 aa30.94■■■□□ 2.54
NELFCD-213ENST00000602795 RRP7BPQ9NSQ0 103 aa30.93■■■□□ 2.54
NELFCD-213ENST00000602795 CDK13Q14004 1512 aaKnown RBP30.93■■■□□ 2.54
NELFCD-213ENST00000602795 SUPT16HQ9Y5B9 1047 aaKnown RBP30.91■■■□□ 2.54
NELFCD-213ENST00000602795 TONSLQ96HA7 1378 aa30.91■■■□□ 2.54
NELFCD-213ENST00000602795 ZNF608Q9ULD9 1512 aaPredicted RBP30.91■■■□□ 2.54
NELFCD-213ENST00000602795 EPRSP07814 1512 aaKnown RBP30.88■■■□□ 2.53
NELFCD-213ENST00000602795 HECW1Q76N89 1606 aa30.87■■■□□ 2.53
NELFCD-213ENST00000602795 KDM6BO15054 1643 aa30.85■■■□□ 2.53
NELFCD-213ENST00000602795 WDR62O43379 1518 aa30.81■■■□□ 2.52
NELFCD-213ENST00000602795 KDM5BQ9UGL1 1544 aa30.81■■■□□ 2.52
NELFCD-213ENST00000602795 DENND4BO75064 1496 aaPredicted RBP30.8■■■□□ 2.52
NELFCD-213ENST00000602795 TCOF1Q13428 1488 aaKnown RBP30.79■■■□□ 2.52
NELFCD-213ENST00000602795 GCC2Q8IWJ2 1684 aa30.73■■■□□ 2.51
NELFCD-213ENST00000602795 TRIM52Q96A61 297 aa30.71■■■□□ 2.51
NELFCD-213ENST00000602795 IFT140Q96RY7 1462 aa30.7■■■□□ 2.5
NELFCD-213ENST00000602795 FOXD1Q16676 465 aa30.68■■■□□ 2.5
NELFCD-213ENST00000602795 DISP1Q96F81 1524 aa30.67■■■□□ 2.5
NELFCD-213ENST00000602795 ZNF644Q9H582 1327 aaPredicted RBP30.64■■■□□ 2.5
NELFCD-213ENST00000602795 KIAA0556O60303 1618 aa30.64■■■□□ 2.49
NELFCD-213ENST00000602795 ANP32CO43423 234 aa30.62■■■□□ 2.49
NELFCD-213ENST00000602795 MIA2Q96PC5 1412 aa30.61■■■□□ 2.49
NELFCD-213ENST00000602795 NUP153P49790 1475 aaKnown RBP30.6■■■□□ 2.49
NELFCD-213ENST00000602795 EIF4G3O43432 1585 aaKnown RBP30.59■■■□□ 2.49
NELFCD-213ENST00000602795 KIAA0586Q9BVV6 1533 aa30.59■■■□□ 2.49
NELFCD-213ENST00000602795 MPHOSPH9Q99550 1183 aa30.58■■■□□ 2.49
NELFCD-213ENST00000602795 AKNAQ7Z591 1439 aa30.56■■■□□ 2.48
NELFCD-213ENST00000602795 ERCC6Q03468 1493 aa30.56■■■□□ 2.48
NELFCD-213ENST00000602795 GRIN2AQ12879 1464 aa30.55■■■□□ 2.48
NELFCD-213ENST00000602795 CCER2I3L3R5 266 aa30.53■■■□□ 2.48
NELFCD-213ENST00000602795 BCANQ96GW7 911 aa30.53■■■□□ 2.48
NELFCD-213ENST00000602795 DAPK1P53355 1430 aa30.52■■■□□ 2.48
NELFCD-213ENST00000602795 RAPGEF6Q8TEU7 1601 aa30.51■■■□□ 2.47
NELFCD-213ENST00000602795 HSPA5P11021 654 aaKnown RBP30.51■■■□□ 2.47
NELFCD-213ENST00000602795 ABCC5O15440 1437 aa30.5■■■□□ 2.47
NELFCD-213ENST00000602795 WASHC2AQ641Q2 1341 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms