RNA–Protein interactions for RNA: ENST00000601600.1

SYMPK-217, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-217ENST00000601600 IFNLR1Q8IU57 520 aaPredicted RBP17.59■□□□□ 0.41
SYMPK-217ENST00000601600 DSG3P32926 999 aa17.57■□□□□ 0.4
SYMPK-217ENST00000601600 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
SYMPK-217ENST00000601600 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
SYMPK-217ENST00000601600 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
SYMPK-217ENST00000601600 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
SYMPK-217ENST00000601600 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
SYMPK-217ENST00000601600 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
SYMPK-217ENST00000601600 SPDYE2BA6NHP3 402 aa17.36■□□□□ 0.37
SYMPK-217ENST00000601600 SPDYE6P0CI01 402 aa17.36■□□□□ 0.37
SYMPK-217ENST00000601600 SPDYE2Q495Y8 402 aa17.36■□□□□ 0.37
SYMPK-217ENST00000601600 SSUH2Q9Y2M2 353 aa17.35■□□□□ 0.37
SYMPK-217ENST00000601600 PKD2Q13563 968 aa17.32■□□□□ 0.36
SYMPK-217ENST00000601600 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
SYMPK-217ENST00000601600 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
SYMPK-217ENST00000601600 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
SYMPK-217ENST00000601600 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
SYMPK-217ENST00000601600 STAG3Q9UJ98 1225 aa17.25■□□□□ 0.35
SYMPK-217ENST00000601600 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
SYMPK-217ENST00000601600 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.35
SYMPK-217ENST00000601600 EIF4G3O43432 1585 aaKnown RBP17.2■□□□□ 0.34
SYMPK-217ENST00000601600 SPOCK2Q92563 424 aa17.2■□□□□ 0.34
SYMPK-217ENST00000601600 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
SYMPK-217ENST00000601600 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
SYMPK-217ENST00000601600 PLCD3Q8N3E9 789 aa17.14■□□□□ 0.33
SYMPK-217ENST00000601600 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
SYMPK-217ENST00000601600 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
SYMPK-217ENST00000601600 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
SYMPK-217ENST00000601600 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
SYMPK-217ENST00000601600 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-217ENST00000601600 MIER1Q8N108 512 aa17.08■□□□□ 0.32
SYMPK-217ENST00000601600 CHD1O14646 1710 aa17.07■□□□□ 0.32
SYMPK-217ENST00000601600 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
SYMPK-217ENST00000601600 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.325e-11■■■■■ 56.3
SYMPK-217ENST00000601600 ARHGEF11O15085 1522 aa17.05■□□□□ 0.32
SYMPK-217ENST00000601600 ECM2O94769 699 aaPredicted RBP17.02■□□□□ 0.32
SYMPK-217ENST00000601600 SOGA1O94964 1423 aa17.02■□□□□ 0.31
SYMPK-217ENST00000601600 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
SYMPK-217ENST00000601600 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
SYMPK-217ENST00000601600 CUX1P39880 1505 aa16.97■□□□□ 0.31
SYMPK-217ENST00000601600 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
SYMPK-217ENST00000601600 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
SYMPK-217ENST00000601600 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
SYMPK-217ENST00000601600 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
SYMPK-217ENST00000601600 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
SYMPK-217ENST00000601600 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
SYMPK-217ENST00000601600 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
SYMPK-217ENST00000601600 RGL2O15211 777 aa16.87■□□□□ 0.29
SYMPK-217ENST00000601600 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
SYMPK-217ENST00000601600 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
SYMPK-217ENST00000601600 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
SYMPK-217ENST00000601600 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
SYMPK-217ENST00000601600 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
SYMPK-217ENST00000601600 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
SYMPK-217ENST00000601600 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
SYMPK-217ENST00000601600 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
SYMPK-217ENST00000601600 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
SYMPK-217ENST00000601600 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
SYMPK-217ENST00000601600 ABCA5Q8WWZ7 1642 aa16.82■□□□□ 0.28
SYMPK-217ENST00000601600 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
SYMPK-217ENST00000601600 BBXQ8WY36 941 aaPredicted RBP16.82■□□□□ 0.28
SYMPK-217ENST00000601600 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
SYMPK-217ENST00000601600 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
SYMPK-217ENST00000601600 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
SYMPK-217ENST00000601600 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
SYMPK-217ENST00000601600 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
SYMPK-217ENST00000601600 ADAMTS12P58397 1594 aa16.69■□□□□ 0.26
SYMPK-217ENST00000601600 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
SYMPK-217ENST00000601600 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
SYMPK-217ENST00000601600 VSIG10Q8N0Z9 540 aa16.68■□□□□ 0.26
SYMPK-217ENST00000601600 SPDYE1Q8NFV5 336 aaPredicted RBP16.65■□□□□ 0.26
SYMPK-217ENST00000601600 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
SYMPK-217ENST00000601600 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
SYMPK-217ENST00000601600 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
SYMPK-217ENST00000601600 ERICH3Q5RHP9 1530 aa16.64■□□□□ 0.25
SYMPK-217ENST00000601600 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
SYMPK-217ENST00000601600 NUP160Q12769 1436 aa16.62■□□□□ 0.25
SYMPK-217ENST00000601600 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
SYMPK-217ENST00000601600 CHGAP10645 457 aaKnown RBP16.6■□□□□ 0.25
SYMPK-217ENST00000601600 NUBP1P53384 320 aa16.6■□□□□ 0.25
SYMPK-217ENST00000601600 SHROOM2Q13796 1616 aa16.58■□□□□ 0.24
SYMPK-217ENST00000601600 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
SYMPK-217ENST00000601600 GSE1Q14687 1217 aa16.55■□□□□ 0.24
SYMPK-217ENST00000601600 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
SYMPK-217ENST00000601600 SPRYD3Q8NCJ5 442 aa16.54■□□□□ 0.24
SYMPK-217ENST00000601600 CREBZFQ9NS37 354 aa16.54■□□□□ 0.24
SYMPK-217ENST00000601600 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
SYMPK-217ENST00000601600 RNF25Q96BH1 459 aaPredicted RBP16.53■□□□□ 0.24
SYMPK-217ENST00000601600 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
SYMPK-217ENST00000601600 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
SYMPK-217ENST00000601600 BCANQ96GW7 911 aa16.49■□□□□ 0.23
SYMPK-217ENST00000601600 MNX1P50219 401 aaPredicted RBP16.48■□□□□ 0.23
SYMPK-217ENST00000601600 DCAF8Q5TAQ9 597 aa16.47■□□□□ 0.23
SYMPK-217ENST00000601600 HS6ST3Q8IZP7 471 aa16.47■□□□□ 0.23
SYMPK-217ENST00000601600 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
SYMPK-217ENST00000601600 TSHZ2Q9NRE2 1034 aa16.45■□□□□ 0.22
SYMPK-217ENST00000601600 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
SYMPK-217ENST00000601600 CUL7Q14999 1698 aa16.43■□□□□ 0.22
SYMPK-217ENST00000601600 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
SYMPK-217ENST00000601600 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms