RNA–Protein interactions for RNA: ENST00000601600.1

SYMPK-217, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-217ENST00000601600 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
SYMPK-217ENST00000601600 AEBP2Q6ZN18 517 aaPredicted RBP29.85■■■□□ 2.37
SYMPK-217ENST00000601600 PHF23Q9BUL5 403 aaPredicted RBP26.41■■□□□ 1.82
SYMPK-217ENST00000601600 SENP3Q9H4L4 574 aaPredicted RBP25.1■■□□□ 1.61
SYMPK-217ENST00000601600 PLPPR3Q6T4P5 718 aa24.56■■□□□ 1.52
SYMPK-217ENST00000601600 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
SYMPK-217ENST00000601600 FOXD1Q16676 465 aa23.27■■□□□ 1.32
SYMPK-217ENST00000601600 ADRA2BP18089 450 aa23.1■■□□□ 1.29
SYMPK-217ENST00000601600 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
SYMPK-217ENST00000601600 KCNA4P22459 653 aa22.22■■□□□ 1.15
SYMPK-217ENST00000601600 PIAS4Q8N2W9 510 aaPredicted RBP22.1■■□□□ 1.13
SYMPK-217ENST00000601600 PPP4R3CPQ6ZMV5 832 aa21.78■■□□□ 1.08
SYMPK-217ENST00000601600 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
SYMPK-217ENST00000601600 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
SYMPK-217ENST00000601600 SLC4A1APQ9BWU0 796 aaKnown RBP21.26■□□□□ 0.99
SYMPK-217ENST00000601600 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
SYMPK-217ENST00000601600 NPM3O75607 178 aaKnown RBP21.15■□□□□ 0.98
SYMPK-217ENST00000601600 MSH5O43196 834 aa21.06■□□□□ 0.96
SYMPK-217ENST00000601600 ABCC9O60706 1549 aa21.03■□□□□ 0.96
SYMPK-217ENST00000601600 CSRNP3Q8WYN3 585 aa21■□□□□ 0.95
SYMPK-217ENST00000601600 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
SYMPK-217ENST00000601600 CNKSR2Q8WXI2 1034 aa20.96■□□□□ 0.95
SYMPK-217ENST00000601600 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
SYMPK-217ENST00000601600 ZBTB22O15209 634 aa20.51■□□□□ 0.87
SYMPK-217ENST00000601600 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
SYMPK-217ENST00000601600 RNF216Q9NWF9 866 aaPredicted RBP20.36■□□□□ 0.85
SYMPK-217ENST00000601600 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
SYMPK-217ENST00000601600 FOXD4L1Q9NU39 408 aa20.16■□□□□ 0.82
SYMPK-217ENST00000601600 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
SYMPK-217ENST00000601600 HOXD11P31277 338 aaPredicted RBP20.08■□□□□ 0.81
SYMPK-217ENST00000601600 NACADO15069 1562 aa19.96■□□□□ 0.79
SYMPK-217ENST00000601600 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
SYMPK-217ENST00000601600 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
SYMPK-217ENST00000601600 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
SYMPK-217ENST00000601600 UNC13AQ9UPW8 1703 aa19.63■□□□□ 0.73
SYMPK-217ENST00000601600 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
SYMPK-217ENST00000601600 MYCNP04198 464 aaPredicted RBP19.47■□□□□ 0.71
SYMPK-217ENST00000601600 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
SYMPK-217ENST00000601600 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
SYMPK-217ENST00000601600 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
SYMPK-217ENST00000601600 ATXN8OSP0DMR3 200 aa19.36■□□□□ 0.69
SYMPK-217ENST00000601600 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
SYMPK-217ENST00000601600 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
SYMPK-217ENST00000601600 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
SYMPK-217ENST00000601600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.651e-8■■■□□ 16.5
SYMPK-217ENST00000601600 CC2D2AQ9P2K1 1620 aa19.03■□□□□ 0.64
SYMPK-217ENST00000601600 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
SYMPK-217ENST00000601600 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
SYMPK-217ENST00000601600 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
SYMPK-217ENST00000601600 U3KPZ7 1027 aaPredicted RBP18.95■□□□□ 0.62
SYMPK-217ENST00000601600 FKBP8Q14318 412 aa18.91■□□□□ 0.62
SYMPK-217ENST00000601600 SAMD1Q6SPF0 538 aaPredicted RBP18.88■□□□□ 0.61
SYMPK-217ENST00000601600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.87■□□□□ 0.61
SYMPK-217ENST00000601600 HNRNPUL2Q1KMD3 747 aaKnown RBP18.87■□□□□ 0.61
SYMPK-217ENST00000601600 RTN4Q9NQC3 1192 aaKnown RBP18.65■□□□□ 0.58
SYMPK-217ENST00000601600 AMER1Q5JTC6 1135 aaPredicted RBP18.59■□□□□ 0.57
SYMPK-217ENST00000601600 ZNF219Q9P2Y4 722 aaPredicted RBP18.53■□□□□ 0.56
SYMPK-217ENST00000601600 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
SYMPK-217ENST00000601600 APLP2Q06481 763 aa18.46■□□□□ 0.55
SYMPK-217ENST00000601600 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
SYMPK-217ENST00000601600 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
SYMPK-217ENST00000601600 SMARCA2P51531 1590 aa18.33■□□□□ 0.52
SYMPK-217ENST00000601600 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
SYMPK-217ENST00000601600 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
SYMPK-217ENST00000601600 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
SYMPK-217ENST00000601600 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
SYMPK-217ENST00000601600 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
SYMPK-217ENST00000601600 MKRN4PQ13434 485 aaPredicted RBP18.2■□□□□ 0.5
SYMPK-217ENST00000601600 CUX2O14529 1486 aa18.2■□□□□ 0.5
SYMPK-217ENST00000601600 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
SYMPK-217ENST00000601600 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
SYMPK-217ENST00000601600 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
SYMPK-217ENST00000601600 TRHP20396 242 aaPredicted RBP18.15■□□□□ 0.5
SYMPK-217ENST00000601600 SPDYE4A6NLX3 237 aa18.11■□□□□ 0.49
SYMPK-217ENST00000601600 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
SYMPK-217ENST00000601600 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
SYMPK-217ENST00000601600 POLA2Q14181 598 aa18.05■□□□□ 0.48
SYMPK-217ENST00000601600 NESP48681 1621 aa18.05■□□□□ 0.48
SYMPK-217ENST00000601600 CAPN15O75808 1086 aa18.04■□□□□ 0.48
SYMPK-217ENST00000601600 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
SYMPK-217ENST00000601600 FBLN2P98095 1184 aa18.02■□□□□ 0.48
SYMPK-217ENST00000601600 C1QBPQ07021 282 aaKnown RBP17.96■□□□□ 0.47
SYMPK-217ENST00000601600 PROM2Q8N271 834 aa17.96■□□□□ 0.47
SYMPK-217ENST00000601600 FBXO3Q9UK99 471 aa17.94■□□□□ 0.46
SYMPK-217ENST00000601600 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
SYMPK-217ENST00000601600 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.46
SYMPK-217ENST00000601600 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
SYMPK-217ENST00000601600 WIZO95785 1651 aa17.87■□□□□ 0.45
SYMPK-217ENST00000601600 POTEDQ86YR6 584 aa17.85■□□□□ 0.45
SYMPK-217ENST00000601600 ABCB7O75027 752 aa17.82■□□□□ 0.44
SYMPK-217ENST00000601600 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
SYMPK-217ENST00000601600 VASPP50552 380 aaPredicted RBP17.75■□□□□ 0.43
SYMPK-217ENST00000601600 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-217ENST00000601600 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
SYMPK-217ENST00000601600 WDR62O43379 1518 aa17.7■□□□□ 0.42
SYMPK-217ENST00000601600 RSF1Q96T23 1441 aaPredicted RBP17.68■□□□□ 0.42
SYMPK-217ENST00000601600 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
SYMPK-217ENST00000601600 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
SYMPK-217ENST00000601600 CFTRP13569 1480 aa17.63■□□□□ 0.41
SYMPK-217ENST00000601600 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms