RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 EFCAB5A4FU69 1503 aa15.8■□□□□ 0.12
ZNF544-215ENST00000599953 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
ZNF544-215ENST00000599953 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
ZNF544-215ENST00000599953 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
ZNF544-215ENST00000599953 PCF11O94913 1555 aaKnown RBP15.76■□□□□ 0.11
ZNF544-215ENST00000599953 NESP48681 1621 aa15.76■□□□□ 0.11
ZNF544-215ENST00000599953 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
ZNF544-215ENST00000599953 CTTNBP2Q8WZ74 1663 aa15.75■□□□□ 0.11
ZNF544-215ENST00000599953 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.116e-7■■■■■ 28.4
ZNF544-215ENST00000599953 MIER1Q8N108 512 aa15.74■□□□□ 0.11
ZNF544-215ENST00000599953 GTF3C3Q9Y5Q9 886 aa15.73■□□□□ 0.11
ZNF544-215ENST00000599953 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
ZNF544-215ENST00000599953 ITGAEP38570 1179 aa15.72■□□□□ 0.11
ZNF544-215ENST00000599953 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
ZNF544-215ENST00000599953 RAB3GAP2Q9H2M9 1393 aa15.72■□□□□ 0.11
ZNF544-215ENST00000599953 FHOD3Q2V2M9 1422 aa15.71■□□□□ 0.1
ZNF544-215ENST00000599953 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
ZNF544-215ENST00000599953 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
ZNF544-215ENST00000599953 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
ZNF544-215ENST00000599953 FMN1Q68DA7 1419 aa15.7■□□□□ 0.1
ZNF544-215ENST00000599953 PDS5BQ9NTI5 1447 aa15.7■□□□□ 0.1
ZNF544-215ENST00000599953 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
ZNF544-215ENST00000599953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.67■□□□□ 0.1
ZNF544-215ENST00000599953 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
ZNF544-215ENST00000599953 YTHDC1Q96MU7 727 aaKnown RBP15.66■□□□□ 0.1
ZNF544-215ENST00000599953 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
ZNF544-215ENST00000599953 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
ZNF544-215ENST00000599953 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
ZNF544-215ENST00000599953 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
ZNF544-215ENST00000599953 SAMD9Q5K651 1589 aa15.61■□□□□ 0.09
ZNF544-215ENST00000599953 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
ZNF544-215ENST00000599953 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
ZNF544-215ENST00000599953 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.09
ZNF544-215ENST00000599953 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
ZNF544-215ENST00000599953 TIMELESSQ9UNS1 1208 aa15.56■□□□□ 0.08
ZNF544-215ENST00000599953 FGD6Q6ZV73 1430 aa15.55■□□□□ 0.08
ZNF544-215ENST00000599953 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
ZNF544-215ENST00000599953 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
ZNF544-215ENST00000599953 GRIN2BQ13224 1484 aa15.52■□□□□ 0.08
ZNF544-215ENST00000599953 EHBP1L1Q8N3D4 1523 aa15.5■□□□□ 0.07
ZNF544-215ENST00000599953 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
ZNF544-215ENST00000599953 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
ZNF544-215ENST00000599953 MYOM3Q5VTT5 1437 aa15.48■□□□□ 0.07
ZNF544-215ENST00000599953 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
ZNF544-215ENST00000599953 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
ZNF544-215ENST00000599953 HFM1A2PYH4 1435 aa15.46■□□□□ 0.07
ZNF544-215ENST00000599953 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.07
ZNF544-215ENST00000599953 SIN3AQ96ST3 1273 aa15.44■□□□□ 0.06
ZNF544-215ENST00000599953 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
ZNF544-215ENST00000599953 HECW1Q76N89 1606 aa15.44■□□□□ 0.06
ZNF544-215ENST00000599953 IQGAP2Q13576 1575 aa15.43■□□□□ 0.06
ZNF544-215ENST00000599953 ADAMTS12P58397 1594 aa15.43■□□□□ 0.06
ZNF544-215ENST00000599953 UACAQ9BZF9 1416 aa15.42■□□□□ 0.06
ZNF544-215ENST00000599953 PTPN23Q9H3S7 1636 aa15.42■□□□□ 0.06
ZNF544-215ENST00000599953 UGGT2Q9NYU1 1516 aa15.42■□□□□ 0.06
ZNF544-215ENST00000599953 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
ZNF544-215ENST00000599953 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
ZNF544-215ENST00000599953 PPP1R15AO75807 674 aaPredicted RBP15.38■□□□□ 0.05
ZNF544-215ENST00000599953 TONSLQ96HA7 1378 aa15.38■□□□□ 0.05
ZNF544-215ENST00000599953 NAIPQ13075 1403 aa15.38■□□□□ 0.05
ZNF544-215ENST00000599953 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
ZNF544-215ENST00000599953 TCOF1Q13428 1488 aaKnown RBP15.37■□□□□ 0.05
ZNF544-215ENST00000599953 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
ZNF544-215ENST00000599953 EPRSP07814 1512 aaKnown RBP15.35■□□□□ 0.05
ZNF544-215ENST00000599953 MAGI3Q5TCQ9 1506 aa15.35■□□□□ 0.05
ZNF544-215ENST00000599953 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
ZNF544-215ENST00000599953 MIA2Q96PC5 1412 aa15.33■□□□□ 0.05
ZNF544-215ENST00000599953 WDR62O43379 1518 aa15.33■□□□□ 0.04
ZNF544-215ENST00000599953 GCC2Q8IWJ2 1684 aa15.32■□□□□ 0.04
ZNF544-215ENST00000599953 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
ZNF544-215ENST00000599953 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
ZNF544-215ENST00000599953 CDK13Q14004 1512 aaKnown RBP15.28■□□□□ 0.04
ZNF544-215ENST00000599953 KIAA0556O60303 1618 aa15.26■□□□□ 0.03
ZNF544-215ENST00000599953 ZNF608Q9ULD9 1512 aaPredicted RBP15.25■□□□□ 0.03
ZNF544-215ENST00000599953 ANP32CO43423 234 aa15.24■□□□□ 0.03
ZNF544-215ENST00000599953 RRP7BPQ9NSQ0 103 aa15.24■□□□□ 0.03
ZNF544-215ENST00000599953 CCER2I3L3R5 266 aa15.23■□□□□ 0.03
ZNF544-215ENST00000599953 GRIN2AQ12879 1464 aa15.23■□□□□ 0.03
ZNF544-215ENST00000599953 DISP1Q96F81 1524 aa15.22■□□□□ 0.03
ZNF544-215ENST00000599953 CHIC2Q9UKJ5 165 aa15.22■□□□□ 0.03
ZNF544-215ENST00000599953 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
ZNF544-215ENST00000599953 SUPT16HQ9Y5B9 1047 aaKnown RBP15.21■□□□□ 0.03
ZNF544-215ENST00000599953 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
ZNF544-215ENST00000599953 TRIM52Q96A61 297 aa15.2■□□□□ 0.02
ZNF544-215ENST00000599953 RAPGEF6Q8TEU7 1601 aa15.2■□□□□ 0.02
ZNF544-215ENST00000599953 ROCK1Q13464 1354 aa15.2■□□□□ 0.02
ZNF544-215ENST00000599953 KCNH8Q96L42 1107 aa15.19■□□□□ 0.02
ZNF544-215ENST00000599953 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
ZNF544-215ENST00000599953 HIRIP3Q9BW71 556 aaPredicted RBP15.18■□□□□ 0.02
ZNF544-215ENST00000599953 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
ZNF544-215ENST00000599953 KDM5BQ9UGL1 1544 aa15.18■□□□□ 0.02
ZNF544-215ENST00000599953 DAPK1P53355 1430 aa15.17■□□□□ 0.02
ZNF544-215ENST00000599953 DNMT1P26358 1616 aaKnown RBP15.17■□□□□ 0.02
ZNF544-215ENST00000599953 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
ZNF544-215ENST00000599953 ARID3CA6NKF2 412 aa15.15■□□□□ 0.02
ZNF544-215ENST00000599953 MPHOSPH9Q99550 1183 aa15.15■□□□□ 0.02
ZNF544-215ENST00000599953 KDM6BO15054 1643 aa15.14■□□□□ 0.01
ZNF544-215ENST00000599953 DENND4BO75064 1496 aaPredicted RBP15.14■□□□□ 0.01
ZNF544-215ENST00000599953 SYNJ2O15056 1496 aa15.13■□□□□ 0.01
ZNF544-215ENST00000599953 ABCC5O15440 1437 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms