RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 HMGXB3Q12766 1538 aa22.55■■□□□ 1.2
ARHGEF1-219ENST00000599846 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
ARHGEF1-219ENST00000599846 PHLDB1Q86UU1 1377 aa22.51■■□□□ 1.19
ARHGEF1-219ENST00000599846 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
ARHGEF1-219ENST00000599846 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
ARHGEF1-219ENST00000599846 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
ARHGEF1-219ENST00000599846 ARID3CA6NKF2 412 aa22.46■■□□□ 1.19
ARHGEF1-219ENST00000599846 FHAD1B1AJZ9 1412 aa22.43■■□□□ 1.18
ARHGEF1-219ENST00000599846 FKBP8Q14318 412 aa22.43■■□□□ 1.18
ARHGEF1-219ENST00000599846 ANP32CO43423 234 aa22.42■■□□□ 1.18
ARHGEF1-219ENST00000599846 MYT1Q01538 1121 aa22.42■■□□□ 1.18
ARHGEF1-219ENST00000599846 NEFLP07196 543 aa22.42■■□□□ 1.18
ARHGEF1-219ENST00000599846 LRRC9Q6ZRR7 1453 aa22.41■■□□□ 1.18
ARHGEF1-219ENST00000599846 RAD54L2Q9Y4B4 1467 aa22.4■■□□□ 1.18
ARHGEF1-219ENST00000599846 MTUS2Q5JR59 1369 aa22.39■■□□□ 1.17
ARHGEF1-219ENST00000599846 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
ARHGEF1-219ENST00000599846 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
ARHGEF1-219ENST00000599846 TIAM1Q13009 1591 aa22.36■■□□□ 1.17
ARHGEF1-219ENST00000599846 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.17
ARHGEF1-219ENST00000599846 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
ARHGEF1-219ENST00000599846 RRP7BPQ9NSQ0 103 aa22.3■■□□□ 1.16
ARHGEF1-219ENST00000599846 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
ARHGEF1-219ENST00000599846 MAPKBP1O60336 1514 aa22.28■■□□□ 1.16
ARHGEF1-219ENST00000599846 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
ARHGEF1-219ENST00000599846 CNGB1Q14028 1251 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF1-219ENST00000599846 TSHZ2Q9NRE2 1034 aa22.23■■□□□ 1.15
ARHGEF1-219ENST00000599846 NESP48681 1621 aa22.22■■□□□ 1.15
ARHGEF1-219ENST00000599846 PCF11O94913 1555 aaKnown RBP22.2■■□□□ 1.14
ARHGEF1-219ENST00000599846 TIMELESSQ9UNS1 1208 aa22.19■■□□□ 1.14
ARHGEF1-219ENST00000599846 HNRNPUQ00839 825 aaKnown RBP eCLIP22.15■■□□□ 1.14
ARHGEF1-219ENST00000599846 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
ARHGEF1-219ENST00000599846 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
ARHGEF1-219ENST00000599846 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
ARHGEF1-219ENST00000599846 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
ARHGEF1-219ENST00000599846 IRX6P78412 446 aaPredicted RBP22.13■■□□□ 1.13
ARHGEF1-219ENST00000599846 FGD6Q6ZV73 1430 aa22.12■■□□□ 1.13
ARHGEF1-219ENST00000599846 CASKIN1Q8WXD9 1431 aa22.12■■□□□ 1.13
ARHGEF1-219ENST00000599846 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
ARHGEF1-219ENST00000599846 FOXD1Q16676 465 aa22.1■■□□□ 1.13
ARHGEF1-219ENST00000599846 TOPBP1Q92547 1522 aa22.1■■□□□ 1.13
ARHGEF1-219ENST00000599846 CCDC18Q5T9S5 1454 aa22.08■■□□□ 1.13
ARHGEF1-219ENST00000599846 FYCO1Q9BQS8 1478 aa22.08■■□□□ 1.12
ARHGEF1-219ENST00000599846 CCER2I3L3R5 266 aa22.06■■□□□ 1.12
ARHGEF1-219ENST00000599846 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
ARHGEF1-219ENST00000599846 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
ARHGEF1-219ENST00000599846 HSPA5P11021 654 aaKnown RBP22.01■■□□□ 1.11
ARHGEF1-219ENST00000599846 PTPRKQ15262 1439 aa22■■□□□ 1.11
ARHGEF1-219ENST00000599846 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
ARHGEF1-219ENST00000599846 ZNF326Q5BKZ1 582 aaKnown RBP21.99■■□□□ 1.11
ARHGEF1-219ENST00000599846 FAM9BQ8IZU0 186 aa21.99■■□□□ 1.11
ARHGEF1-219ENST00000599846 EIF4G2P78344 907 aaKnown RBP eCLIP21.98■■□□□ 1.114e-7■■■■□ 20.1
ARHGEF1-219ENST00000599846 NCOA2Q15596 1464 aa21.97■■□□□ 1.11
ARHGEF1-219ENST00000599846 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
ARHGEF1-219ENST00000599846 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
ARHGEF1-219ENST00000599846 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
ARHGEF1-219ENST00000599846 MYOM3Q5VTT5 1437 aa21.94■■□□□ 1.1
ARHGEF1-219ENST00000599846 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
ARHGEF1-219ENST00000599846 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
ARHGEF1-219ENST00000599846 HFM1A2PYH4 1435 aa21.92■■□□□ 1.1
ARHGEF1-219ENST00000599846 MPHOSPH9Q99550 1183 aa21.92■■□□□ 1.1
ARHGEF1-219ENST00000599846 CFAP43Q8NDM7 1665 aa21.92■■□□□ 1.1
ARHGEF1-219ENST00000599846 L3MBTL2Q969R5 705 aa21.91■■□□□ 1.1
ARHGEF1-219ENST00000599846 NAIPQ13075 1403 aa21.91■■□□□ 1.1
ARHGEF1-219ENST00000599846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.91■■□□□ 1.14e-7■□□□□ 8.1
ARHGEF1-219ENST00000599846 FBLN2P98095 1184 aa21.9■■□□□ 1.1
ARHGEF1-219ENST00000599846 SENP3-EIF4A1A0A087X0R7 540 aa21.89■■□□□ 1.09
ARHGEF1-219ENST00000599846 SLC4A1APQ9BWU0 796 aaKnown RBP21.89■■□□□ 1.09
ARHGEF1-219ENST00000599846 RBM19Q9Y4C8 960 aaKnown RBP21.88■■□□□ 1.09
ARHGEF1-219ENST00000599846 AQRO60306 1485 aaKnown RBP eCLIP21.88■■□□□ 1.091e-6■■■■■ 36
ARHGEF1-219ENST00000599846 ANP32EQ9BTT0 268 aa21.88■■□□□ 1.09
ARHGEF1-219ENST00000599846 MRS2Q9HD23 443 aa21.87■■□□□ 1.09
ARHGEF1-219ENST00000599846 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
ARHGEF1-219ENST00000599846 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
ARHGEF1-219ENST00000599846 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
ARHGEF1-219ENST00000599846 SNAPC4Q5SXM2 1469 aa21.84■■□□□ 1.09
ARHGEF1-219ENST00000599846 CDK11AQ9UQ88 783 aaPredicted RBP21.82■■□□□ 1.08
ARHGEF1-219ENST00000599846 CUL7Q14999 1698 aa21.82■■□□□ 1.08
ARHGEF1-219ENST00000599846 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
ARHGEF1-219ENST00000599846 CCDC184Q52MB2 194 aa21.81■■□□□ 1.08
ARHGEF1-219ENST00000599846 ERICH6Q7L0X2 663 aa21.8■■□□□ 1.08
ARHGEF1-219ENST00000599846 PTPN23Q9H3S7 1636 aa21.79■■□□□ 1.08
ARHGEF1-219ENST00000599846 CTTNBP2Q8WZ74 1663 aa21.76■■□□□ 1.07
ARHGEF1-219ENST00000599846 C11orf95C9JLR9 678 aaPredicted RBP21.75■■□□□ 1.07
ARHGEF1-219ENST00000599846 GRIN2BQ13224 1484 aa21.73■■□□□ 1.07
ARHGEF1-219ENST00000599846 SUPT6HQ7KZ85 1726 aaKnown RBP21.72■■□□□ 1.07
ARHGEF1-219ENST00000599846 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
ARHGEF1-219ENST00000599846 CDK13Q14004 1512 aaKnown RBP21.71■■□□□ 1.07
ARHGEF1-219ENST00000599846 EHBP1L1Q8N3D4 1523 aa21.71■■□□□ 1.07
ARHGEF1-219ENST00000599846 NBPF8Q3BBV2 869 aa21.7■■□□□ 1.06
ARHGEF1-219ENST00000599846 PRKRIP1Q9H875 184 aaPredicted RBP21.69■■□□□ 1.06
ARHGEF1-219ENST00000599846 B4GALNT3Q6L9W6 998 aa21.68■■□□□ 1.06
ARHGEF1-219ENST00000599846 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
ARHGEF1-219ENST00000599846 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF1-219ENST00000599846 EPRSP07814 1512 aaKnown RBP21.64■■□□□ 1.06
ARHGEF1-219ENST00000599846 MAGI3Q5TCQ9 1506 aa21.64■■□□□ 1.06
ARHGEF1-219ENST00000599846 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
ARHGEF1-219ENST00000599846 UGGT2Q9NYU1 1516 aa21.62■■□□□ 1.05
ARHGEF1-219ENST00000599846 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
ARHGEF1-219ENST00000599846 PKD2Q13563 968 aa21.6■■□□□ 1.05
ARHGEF1-219ENST00000599846 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms