RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 ITGAEP38570 1179 aa28.94■■■□□ 2.22
GRAMD1A-207ENST00000598118 URB2Q14146 1524 aaKnown RBP28.93■■■□□ 2.22
GRAMD1A-207ENST00000598118 PCF11O94913 1555 aaKnown RBP28.93■■■□□ 2.22
GRAMD1A-207ENST00000598118 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
GRAMD1A-207ENST00000598118 CUL7Q14999 1698 aa28.92■■■□□ 2.22
GRAMD1A-207ENST00000598118 WDR97A6NE52 1622 aa28.89■■■□□ 2.22
GRAMD1A-207ENST00000598118 CFAP43Q8NDM7 1665 aa28.89■■■□□ 2.21
GRAMD1A-207ENST00000598118 CENPBP07199 599 aaPredicted RBP28.89■■■□□ 2.21
GRAMD1A-207ENST00000598118 FHOD3Q2V2M9 1422 aa28.88■■■□□ 2.21
GRAMD1A-207ENST00000598118 PHLDB1Q86UU1 1377 aa28.87■■■□□ 2.21
GRAMD1A-207ENST00000598118 MIER1Q8N108 512 aa28.87■■■□□ 2.21
GRAMD1A-207ENST00000598118 DNAJC5BQ9UF47 199 aa28.86■■■□□ 2.21
GRAMD1A-207ENST00000598118 CTTNBP2Q8WZ74 1663 aa28.86■■■□□ 2.21
GRAMD1A-207ENST00000598118 EFCAB5A4FU69 1503 aa28.82■■■□□ 2.2
GRAMD1A-207ENST00000598118 RAB3GAP2Q9H2M9 1393 aa28.79■■■□□ 2.2
GRAMD1A-207ENST00000598118 ATP1B4Q9UN42 357 aaPredicted RBP28.79■■■□□ 2.2
GRAMD1A-207ENST00000598118 TDRD9Q8NDG6 1382 aaKnown RBP28.77■■■□□ 2.2
GRAMD1A-207ENST00000598118 ABCA5Q8WWZ7 1642 aa28.77■■■□□ 2.2
GRAMD1A-207ENST00000598118 FYCO1Q9BQS8 1478 aa28.76■■■□□ 2.19
GRAMD1A-207ENST00000598118 CASKIN1Q8WXD9 1431 aa28.74■■■□□ 2.19
GRAMD1A-207ENST00000598118 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
GRAMD1A-207ENST00000598118 PDS5BQ9NTI5 1447 aa28.72■■■□□ 2.19
GRAMD1A-207ENST00000598118 GTF3C3Q9Y5Q9 886 aa28.72■■■□□ 2.19
GRAMD1A-207ENST00000598118 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.192e-7■■■■■ 59.6
GRAMD1A-207ENST00000598118 YTHDC1Q96MU7 727 aaKnown RBP28.7■■■□□ 2.18
GRAMD1A-207ENST00000598118 GAPVD1Q14C86 1478 aa28.69■■■□□ 2.18
GRAMD1A-207ENST00000598118 FAM50AQ14320 339 aaKnown RBP28.69■■■□□ 2.18
GRAMD1A-207ENST00000598118 MAPKBP1O60336 1514 aa28.69■■■□□ 2.18
GRAMD1A-207ENST00000598118 SETD5Q9C0A6 1442 aa28.68■■■□□ 2.18
GRAMD1A-207ENST00000598118 SNAPC4Q5SXM2 1469 aa28.63■■■□□ 2.17
GRAMD1A-207ENST00000598118 FMN1Q68DA7 1419 aa28.62■■■□□ 2.17
GRAMD1A-207ENST00000598118 SAMD9Q5K651 1589 aa28.61■■■□□ 2.17
GRAMD1A-207ENST00000598118 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
GRAMD1A-207ENST00000598118 LRRIQ1Q96JM4 1722 aa28.57■■■□□ 2.16
GRAMD1A-207ENST00000598118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.5■■■□□ 2.152e-9■□□□□ 11.1
GRAMD1A-207ENST00000598118 FGD6Q6ZV73 1430 aa28.47■■■□□ 2.15
GRAMD1A-207ENST00000598118 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
GRAMD1A-207ENST00000598118 MTUS2Q5JR59 1369 aa28.45■■■□□ 2.15
GRAMD1A-207ENST00000598118 SIN3AQ96ST3 1273 aa28.44■■■□□ 2.14
GRAMD1A-207ENST00000598118 PBRM1Q86U86 1689 aa28.43■■■□□ 2.14
GRAMD1A-207ENST00000598118 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
GRAMD1A-207ENST00000598118 NCOA2Q15596 1464 aa28.36■■■□□ 2.13
GRAMD1A-207ENST00000598118 PTPRKQ15262 1439 aa28.36■■■□□ 2.13
GRAMD1A-207ENST00000598118 SUPT6HQ7KZ85 1726 aaKnown RBP28.32■■■□□ 2.12
GRAMD1A-207ENST00000598118 MRC2Q9UBG0 1479 aa28.32■■■□□ 2.12
GRAMD1A-207ENST00000598118 MYOM3Q5VTT5 1437 aa28.31■■■□□ 2.12
GRAMD1A-207ENST00000598118 MAGI3Q5TCQ9 1506 aa28.31■■■□□ 2.12
GRAMD1A-207ENST00000598118 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
GRAMD1A-207ENST00000598118 EHBP1L1Q8N3D4 1523 aa28.3■■■□□ 2.12
GRAMD1A-207ENST00000598118 PELP1Q8IZL8 1130 aaKnown RBP28.29■■■□□ 2.12
GRAMD1A-207ENST00000598118 IQGAP2Q13576 1575 aa28.27■■■□□ 2.12
GRAMD1A-207ENST00000598118 CCDC18Q5T9S5 1454 aa28.25■■■□□ 2.11
GRAMD1A-207ENST00000598118 HFM1A2PYH4 1435 aa28.25■■■□□ 2.11
GRAMD1A-207ENST00000598118 UGGT2Q9NYU1 1516 aa28.25■■■□□ 2.11
GRAMD1A-207ENST00000598118 PTPN23Q9H3S7 1636 aa28.24■■■□□ 2.11
GRAMD1A-207ENST00000598118 ARHGEF11O15085 1522 aa28.24■■■□□ 2.11
GRAMD1A-207ENST00000598118 TIMELESSQ9UNS1 1208 aa28.22■■■□□ 2.11
GRAMD1A-207ENST00000598118 HECW1Q76N89 1606 aa28.2■■■□□ 2.1
GRAMD1A-207ENST00000598118 ZNF608Q9ULD9 1512 aaPredicted RBP28.19■■■□□ 2.1
GRAMD1A-207ENST00000598118 NAIPQ13075 1403 aa28.19■■■□□ 2.1
GRAMD1A-207ENST00000598118 PPP1R15AO75807 674 aaPredicted RBP28.16■■■□□ 2.1
GRAMD1A-207ENST00000598118 UACAQ9BZF9 1416 aa28.16■■■□□ 2.1
GRAMD1A-207ENST00000598118 EPRSP07814 1512 aaKnown RBP28.16■■■□□ 2.1
GRAMD1A-207ENST00000598118 CDK13Q14004 1512 aaKnown RBP28.12■■■□□ 2.09
GRAMD1A-207ENST00000598118 IFT140Q96RY7 1462 aa28.12■■■□□ 2.09
GRAMD1A-207ENST00000598118 WDR62O43379 1518 aa28.1■■■□□ 2.09
GRAMD1A-207ENST00000598118 TCOF1Q13428 1488 aaKnown RBP28.09■■■□□ 2.09
GRAMD1A-207ENST00000598118 ARID3CA6NKF2 412 aa28.06■■■□□ 2.08
GRAMD1A-207ENST00000598118 DDX10Q13206 875 aaKnown RBP28.06■■■□□ 2.08
GRAMD1A-207ENST00000598118 KCNH8Q96L42 1107 aa28.04■■■□□ 2.08
GRAMD1A-207ENST00000598118 HIRIP3Q9BW71 556 aaPredicted RBP28.04■■■□□ 2.08
GRAMD1A-207ENST00000598118 RRP7BPQ9NSQ0 103 aa28.03■■■□□ 2.08
GRAMD1A-207ENST00000598118 CHIC2Q9UKJ5 165 aa28.03■■■□□ 2.08
GRAMD1A-207ENST00000598118 TONSLQ96HA7 1378 aa28.03■■■□□ 2.08
GRAMD1A-207ENST00000598118 DISP1Q96F81 1524 aa28■■■□□ 2.07
GRAMD1A-207ENST00000598118 KIAA0586Q9BVV6 1533 aa28■■■□□ 2.07
GRAMD1A-207ENST00000598118 GCC2Q8IWJ2 1684 aa27.99■■■□□ 2.07
GRAMD1A-207ENST00000598118 KIAA0556O60303 1618 aa27.99■■■□□ 2.07
GRAMD1A-207ENST00000598118 EIF4G3O43432 1585 aaKnown RBP27.98■■■□□ 2.07
GRAMD1A-207ENST00000598118 MIA2Q96PC5 1412 aa27.96■■■□□ 2.07
GRAMD1A-207ENST00000598118 KDM6BO15054 1643 aa27.96■■■□□ 2.07
GRAMD1A-207ENST00000598118 GRIN2AQ12879 1464 aa27.95■■■□□ 2.06
GRAMD1A-207ENST00000598118 DENND4BO75064 1496 aaPredicted RBP27.93■■■□□ 2.06
GRAMD1A-207ENST00000598118 KDM5BQ9UGL1 1544 aa27.92■■■□□ 2.06
GRAMD1A-207ENST00000598118 AKNAQ7Z591 1439 aa27.91■■■□□ 2.06
GRAMD1A-207ENST00000598118 NUP153P49790 1475 aaKnown RBP27.9■■■□□ 2.06
GRAMD1A-207ENST00000598118 RAPGEF6Q8TEU7 1601 aa27.87■■■□□ 2.05
GRAMD1A-207ENST00000598118 TRIM52Q96A61 297 aa27.84■■■□□ 2.05
GRAMD1A-207ENST00000598118 ERCC6Q03468 1493 aa27.84■■■□□ 2.05
GRAMD1A-207ENST00000598118 CEP170Q5SW79 1584 aa27.8■■■□□ 2.04
GRAMD1A-207ENST00000598118 DAPK1P53355 1430 aa27.79■■■□□ 2.04
GRAMD1A-207ENST00000598118 ZNF644Q9H582 1327 aaPredicted RBP27.79■■■□□ 2.04
GRAMD1A-207ENST00000598118 MAGI1Q96QZ7 1491 aaPredicted RBP27.79■■■□□ 2.04
GRAMD1A-207ENST00000598118 MPHOSPH9Q99550 1183 aa27.77■■■□□ 2.04
GRAMD1A-207ENST00000598118 DNMT1P26358 1616 aaKnown RBP27.76■■■□□ 2.04
GRAMD1A-207ENST00000598118 SUPT16HQ9Y5B9 1047 aaKnown RBP27.76■■■□□ 2.04
GRAMD1A-207ENST00000598118 ABCC5O15440 1437 aa27.76■■■□□ 2.03
GRAMD1A-207ENST00000598118 CHMP7Q8WUX9 453 aaPredicted RBP27.75■■■□□ 2.03
GRAMD1A-207ENST00000598118 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
GRAMD1A-207ENST00000598118 ROCK1Q13464 1354 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms