RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
IRF3-219ENST00000597636 PDS5BQ9NTI5 1447 aa22.09■■□□□ 1.13
IRF3-219ENST00000597636 LAMC3Q9Y6N6 1575 aa22.09■■□□□ 1.13
IRF3-219ENST00000597636 MAPKBP1O60336 1514 aa22.08■■□□□ 1.13
IRF3-219ENST00000597636 RAB3GAP2Q9H2M9 1393 aa22.08■■□□□ 1.13
IRF3-219ENST00000597636 ITGAEP38570 1179 aa22.08■■□□□ 1.12
IRF3-219ENST00000597636 DDX10Q13206 875 aaKnown RBP22.05■■□□□ 1.12
IRF3-219ENST00000597636 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
IRF3-219ENST00000597636 TOPBP1Q92547 1522 aa22.04■■□□□ 1.12
IRF3-219ENST00000597636 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
IRF3-219ENST00000597636 KIF21AQ7Z4S6 1674 aa22.03■■□□□ 1.12
IRF3-219ENST00000597636 NEFLP07196 543 aa22.01■■□□□ 1.11
IRF3-219ENST00000597636 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
IRF3-219ENST00000597636 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
IRF3-219ENST00000597636 PPP1R15AO75807 674 aaPredicted RBP21.99■■□□□ 1.11
IRF3-219ENST00000597636 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
IRF3-219ENST00000597636 TDRD9Q8NDG6 1382 aaKnown RBP21.98■■□□□ 1.11
IRF3-219ENST00000597636 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
IRF3-219ENST00000597636 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
IRF3-219ENST00000597636 CCER2I3L3R5 266 aa21.95■■□□□ 1.1
IRF3-219ENST00000597636 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
IRF3-219ENST00000597636 ERCC6Q03468 1493 aa21.93■■□□□ 1.1
IRF3-219ENST00000597636 SIN3AQ96ST3 1273 aa21.92■■□□□ 1.1
IRF3-219ENST00000597636 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
IRF3-219ENST00000597636 IGF1RP08069 1367 aa21.91■■□□□ 1.1
IRF3-219ENST00000597636 TRIM52Q96A61 297 aa21.88■■□□□ 1.09
IRF3-219ENST00000597636 MAP3K1Q13233 1512 aa21.88■■□□□ 1.09
IRF3-219ENST00000597636 ANP32CO43423 234 aa21.86■■□□□ 1.09
IRF3-219ENST00000597636 TIAM1Q13009 1591 aa21.85■■□□□ 1.09
IRF3-219ENST00000597636 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
IRF3-219ENST00000597636 PHLDB1Q86UU1 1377 aa21.79■■□□□ 1.08
IRF3-219ENST00000597636 LRRC9Q6ZRR7 1453 aa21.79■■□□□ 1.08
IRF3-219ENST00000597636 P3H3Q8IVL6 736 aa21.79■■□□□ 1.08
IRF3-219ENST00000597636 HIRIP3Q9BW71 556 aaPredicted RBP21.79■■□□□ 1.08
IRF3-219ENST00000597636 MSH5O43196 834 aa21.78■■□□□ 1.08
IRF3-219ENST00000597636 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.072e-7■■■■■ 27
IRF3-219ENST00000597636 FAM50AQ14320 339 aaKnown RBP21.77■■□□□ 1.07
IRF3-219ENST00000597636 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
IRF3-219ENST00000597636 ABCA10Q8WWZ4 1543 aa21.74■■□□□ 1.07
IRF3-219ENST00000597636 FANCIQ9NVI1 1328 aa21.72■■□□□ 1.07
IRF3-219ENST00000597636 GAPVD1Q14C86 1478 aa21.68■■□□□ 1.06
IRF3-219ENST00000597636 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
IRF3-219ENST00000597636 FBLN2P98095 1184 aa21.65■■□□□ 1.06
IRF3-219ENST00000597636 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
IRF3-219ENST00000597636 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.06
IRF3-219ENST00000597636 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.05
IRF3-219ENST00000597636 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
IRF3-219ENST00000597636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.61■■□□□ 1.053e-6■□□□□ 11.3
IRF3-219ENST00000597636 CFAP43Q8NDM7 1665 aa21.59■■□□□ 1.05
IRF3-219ENST00000597636 HNRNPUQ00839 825 aaKnown RBP eCLIP21.59■■□□□ 1.052e-8■□□□□ 8.3
IRF3-219ENST00000597636 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
IRF3-219ENST00000597636 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
IRF3-219ENST00000597636 ERICH6BQ5W0A0 696 aa21.55■■□□□ 1.04
IRF3-219ENST00000597636 IRX6P78412 446 aaPredicted RBP21.55■■□□□ 1.04
IRF3-219ENST00000597636 WDR62O43379 1518 aa21.54■■□□□ 1.04
IRF3-219ENST00000597636 PCF11O94913 1555 aaKnown RBP21.54■■□□□ 1.04
IRF3-219ENST00000597636 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
IRF3-219ENST00000597636 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
IRF3-219ENST00000597636 UACAQ9BZF9 1416 aa21.48■■□□□ 1.03
IRF3-219ENST00000597636 PPP4R2Q9NY27 417 aa21.48■■□□□ 1.03
IRF3-219ENST00000597636 CCDC18Q5T9S5 1454 aa21.48■■□□□ 1.03
IRF3-219ENST00000597636 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
IRF3-219ENST00000597636 MYT1LQ9UL68 1186 aa21.47■■□□□ 1.03
IRF3-219ENST00000597636 FYCO1Q9BQS8 1478 aa21.46■■□□□ 1.03
IRF3-219ENST00000597636 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
IRF3-219ENST00000597636 CHMP7Q8WUX9 453 aaPredicted RBP21.44■■□□□ 1.02
IRF3-219ENST00000597636 HFM1A2PYH4 1435 aa21.43■■□□□ 1.02
IRF3-219ENST00000597636 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
IRF3-219ENST00000597636 FHOD3Q2V2M9 1422 aa21.42■■□□□ 1.02
IRF3-219ENST00000597636 ARID3CA6NKF2 412 aa21.42■■□□□ 1.02
IRF3-219ENST00000597636 KDM5BQ9UGL1 1544 aa21.41■■□□□ 1.02
IRF3-219ENST00000597636 GRIN2BQ13224 1484 aa21.4■■□□□ 1.02
IRF3-219ENST00000597636 WASHC2AQ641Q2 1341 aa21.4■■□□□ 1.02
IRF3-219ENST00000597636 PTPRKQ15262 1439 aa21.39■■□□□ 1.01
IRF3-219ENST00000597636 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.01
IRF3-219ENST00000597636 CUL7Q14999 1698 aa21.38■■□□□ 1.01
IRF3-219ENST00000597636 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
IRF3-219ENST00000597636 PTPN23Q9H3S7 1636 aa21.37■■□□□ 1.01
IRF3-219ENST00000597636 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
IRF3-219ENST00000597636 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
IRF3-219ENST00000597636 EFCAB5A4FU69 1503 aa21.35■■□□□ 1.01
IRF3-219ENST00000597636 NAIPQ13075 1403 aa21.35■■□□□ 1.01
IRF3-219ENST00000597636 CCDC184Q52MB2 194 aa21.32■■□□□ 1
IRF3-219ENST00000597636 NCOA2Q15596 1464 aa21.31■■□□□ 1
IRF3-219ENST00000597636 DEKP35659 375 aaKnown RBP21.31■■□□□ 1
IRF3-219ENST00000597636 B4GALNT3Q6L9W6 998 aa21.3■■□□□ 1
IRF3-219ENST00000597636 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
IRF3-219ENST00000597636 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
IRF3-219ENST00000597636 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 12e-7■■■■■ 34.3
IRF3-219ENST00000597636 FMN1Q68DA7 1419 aa21.28■■□□□ 1
IRF3-219ENST00000597636 ZBED9Q6R2W3 1325 aa21.27■■□□□ 1
IRF3-219ENST00000597636 PRKRIP1Q9H875 184 aaPredicted RBP21.26■□□□□ 0.99
IRF3-219ENST00000597636 ADAMTS12P58397 1594 aa21.25■□□□□ 0.99
IRF3-219ENST00000597636 FAM9BQ8IZU0 186 aa21.25■□□□□ 0.99
IRF3-219ENST00000597636 NOP58Q9Y2X3 529 aaKnown RBP21.23■□□□□ 0.99
IRF3-219ENST00000597636 MYOM3Q5VTT5 1437 aa21.23■□□□□ 0.99
IRF3-219ENST00000597636 CTTNBP2Q8WZ74 1663 aa21.22■□□□□ 0.99
IRF3-219ENST00000597636 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
IRF3-219ENST00000597636 CCDC7Q96M83 1385 aa21.19■□□□□ 0.98
IRF3-219ENST00000597636 NCOA1Q15788 1441 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms