RNA–Protein interactions for RNA: ENST00000592917.1

LINC01999-201, Transcript of long intergenic non-protein coding RNA 1999, humanhuman

TSL 2 BASIC

Gene LINC01999, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01999-201ENST00000592917 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
LINC01999-201ENST00000592917 WIZO95785 1651 aa11.17□□□□□ -0.62
LINC01999-201ENST00000592917 CLCN6P51797 869 aa11.14□□□□□ -0.63
LINC01999-201ENST00000592917 TOP2AP11388 1531 aaKnown RBP11.14□□□□□ -0.63
LINC01999-201ENST00000592917 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
LINC01999-201ENST00000592917 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
LINC01999-201ENST00000592917 PLSCR2Q9NRY7 297 aa11.07□□□□□ -0.64
LINC01999-201ENST00000592917 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
LINC01999-201ENST00000592917 LAMC3Q9Y6N6 1575 aa11.05□□□□□ -0.64
LINC01999-201ENST00000592917 CADPSQ9ULU8 1353 aa11.04□□□□□ -0.64
LINC01999-201ENST00000592917 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.65
LINC01999-201ENST00000592917 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
LINC01999-201ENST00000592917 CFTRP13569 1480 aa10.99□□□□□ -0.65
LINC01999-201ENST00000592917 NESP48681 1621 aa10.98□□□□□ -0.65
LINC01999-201ENST00000592917 CCDC88BA6NC98 1476 aa10.98□□□□□ -0.65
LINC01999-201ENST00000592917 ERCC6Q03468 1493 aa10.97□□□□□ -0.65
LINC01999-201ENST00000592917 SUPT5HO00267 1087 aaKnown RBP10.94□□□□□ -0.66
LINC01999-201ENST00000592917 CUX2O14529 1486 aa10.9□□□□□ -0.66
LINC01999-201ENST00000592917 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
LINC01999-201ENST00000592917 FANCD2Q9BXW9 1451 aa10.88□□□□□ -0.67
LINC01999-201ENST00000592917 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
LINC01999-201ENST00000592917 ZRANB1Q9UGI0 708 aa10.87□□□□□ -0.67
LINC01999-201ENST00000592917 MRC2Q9UBG0 1479 aa10.85□□□□□ -0.67
LINC01999-201ENST00000592917 PRDM2Q13029 1718 aa10.84□□□□□ -0.67
LINC01999-201ENST00000592917 KIF21AQ7Z4S6 1674 aa10.84□□□□□ -0.67
LINC01999-201ENST00000592917 THOC2Q8NI27 1593 aaKnown RBP10.83□□□□□ -0.68
LINC01999-201ENST00000592917 WDR62O43379 1518 aa10.81□□□□□ -0.68
LINC01999-201ENST00000592917 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
LINC01999-201ENST00000592917 OTUD5Q96G74 571 aa10.79□□□□□ -0.68
LINC01999-201ENST00000592917 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
LINC01999-201ENST00000592917 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
LINC01999-201ENST00000592917 URB2Q14146 1524 aaKnown RBP10.74□□□□□ -0.69
LINC01999-201ENST00000592917 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
LINC01999-201ENST00000592917 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
LINC01999-201ENST00000592917 POTEMA6NI47 508 aa10.73□□□□□ -0.69
LINC01999-201ENST00000592917 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
LINC01999-201ENST00000592917 TOPBP1Q92547 1522 aa10.71□□□□□ -0.69
LINC01999-201ENST00000592917 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
LINC01999-201ENST00000592917 POTEGQ6S5H5 508 aa10.69□□□□□ -0.7
LINC01999-201ENST00000592917 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
LINC01999-201ENST00000592917 PCDH10Q9P2E7 1040 aa10.67□□□□□ -0.7
LINC01999-201ENST00000592917 PHF12Q96QT6 1004 aa10.63□□□□□ -0.71
LINC01999-201ENST00000592917 CUX1P39880 1505 aa10.63□□□□□ -0.71
LINC01999-201ENST00000592917 POLA1P09884 1462 aaPredicted RBP10.62□□□□□ -0.71
LINC01999-201ENST00000592917 WRNQ14191 1432 aaPredicted RBP eCLIP10.62□□□□□ -0.71
LINC01999-201ENST00000592917 NPM1P06748 294 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC01999-201ENST00000592917 SOGA1O94964 1423 aa10.59□□□□□ -0.71
LINC01999-201ENST00000592917 WDR97A6NE52 1622 aa10.59□□□□□ -0.71
LINC01999-201ENST00000592917 FGD5Q6ZNL6 1462 aa10.59□□□□□ -0.71
LINC01999-201ENST00000592917 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
LINC01999-201ENST00000592917 MAMSTRQ6ZN01 415 aa10.58□□□□□ -0.72
LINC01999-201ENST00000592917 PELP1Q8IZL8 1130 aaKnown RBP10.58□□□□□ -0.72
LINC01999-201ENST00000592917 METRNQ9UJH8 293 aa10.57□□□□□ -0.72
LINC01999-201ENST00000592917 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
LINC01999-201ENST00000592917 BIVM-ERCC5R4GMW8 1640 aa10.57□□□□□ -0.72
LINC01999-201ENST00000592917 C7P10643 843 aa10.56□□□□□ -0.72
LINC01999-201ENST00000592917 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
LINC01999-201ENST00000592917 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
LINC01999-201ENST00000592917 RAD54L2Q9Y4B4 1467 aa10.54□□□□□ -0.72
LINC01999-201ENST00000592917 ABCA10Q8WWZ4 1543 aa10.53□□□□□ -0.72
LINC01999-201ENST00000592917 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
LINC01999-201ENST00000592917 SYNJ1O43426 1573 aa10.53□□□□□ -0.72
LINC01999-201ENST00000592917 EIF4G3O43432 1585 aaKnown RBP10.51□□□□□ -0.73
LINC01999-201ENST00000592917 ATMINO43313 823 aaPredicted RBP10.5□□□□□ -0.73
LINC01999-201ENST00000592917 AQRO60306 1485 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC01999-201ENST00000592917 SPDYE4A6NLX3 237 aa10.49□□□□□ -0.73
LINC01999-201ENST00000592917 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
LINC01999-201ENST00000592917 MNX1P50219 401 aaPredicted RBP10.48□□□□□ -0.73
LINC01999-201ENST00000592917 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
LINC01999-201ENST00000592917 GRIN2BQ13224 1484 aa10.48□□□□□ -0.73
LINC01999-201ENST00000592917 GAPVD1Q14C86 1478 aa10.47□□□□□ -0.73
LINC01999-201ENST00000592917 POTEJP0CG39 1038 aa10.46□□□□□ -0.73
LINC01999-201ENST00000592917 SCUBE2Q9NQ36 999 aa10.46□□□□□ -0.73
LINC01999-201ENST00000592917 MAGI1Q96QZ7 1491 aaPredicted RBP10.46□□□□□ -0.74
LINC01999-201ENST00000592917 ABCA5Q8WWZ7 1642 aa10.45□□□□□ -0.74
LINC01999-201ENST00000592917 FAM163AQ96GL9 167 aaPredicted RBP10.45□□□□□ -0.74
LINC01999-201ENST00000592917 DNAJC5Q9H3Z4 198 aa10.45□□□□□ -0.74
LINC01999-201ENST00000592917 ERICH3Q5RHP9 1530 aa10.42□□□□□ -0.74
LINC01999-201ENST00000592917 SNAPC4Q5SXM2 1469 aa10.42□□□□□ -0.74
LINC01999-201ENST00000592917 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
LINC01999-201ENST00000592917 SYNJ2O15056 1496 aa10.4□□□□□ -0.74
LINC01999-201ENST00000592917 PBRM1Q86U86 1689 aa10.39□□□□□ -0.75
LINC01999-201ENST00000592917 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
LINC01999-201ENST00000592917 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
LINC01999-201ENST00000592917 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
LINC01999-201ENST00000592917 FHAD1B1AJZ9 1412 aa10.38□□□□□ -0.75
LINC01999-201ENST00000592917 ATN1P54259 1190 aaPredicted RBP10.36□□□□□ -0.75
LINC01999-201ENST00000592917 TSPYL2Q9H2G4 693 aaPredicted RBP10.35□□□□□ -0.75
LINC01999-201ENST00000592917 IGF1RP08069 1367 aa10.35□□□□□ -0.75
LINC01999-201ENST00000592917 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
LINC01999-201ENST00000592917 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
LINC01999-201ENST00000592917 CHD1O14646 1710 aa10.33□□□□□ -0.76
LINC01999-201ENST00000592917 GRIN2AQ12879 1464 aa10.32□□□□□ -0.76
LINC01999-201ENST00000592917 CUL7Q14999 1698 aa10.31□□□□□ -0.76
LINC01999-201ENST00000592917 CCDC61Q9Y6R9 512 aa10.31□□□□□ -0.76
LINC01999-201ENST00000592917 NUP160Q12769 1436 aa10.3□□□□□ -0.76
LINC01999-201ENST00000592917 EEA1Q15075 1411 aa10.3□□□□□ -0.76
LINC01999-201ENST00000592917 CARMIL1Q5VZK9 1371 aa10.29□□□□□ -0.76
LINC01999-201ENST00000592917 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
LINC01999-201ENST00000592917 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms