RNA–Protein interactions for RNA: ENST00000592917.1

LINC01999-201, Transcript of long intergenic non-protein coding RNA 1999, humanhuman

TSL 2 BASIC

Gene LINC01999, Length 646 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01999-201ENST00000592917 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
LINC01999-201ENST00000592917 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
LINC01999-201ENST00000592917 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
LINC01999-201ENST00000592917 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
LINC01999-201ENST00000592917 FOXD1Q16676 465 aa17.41■□□□□ 0.38
LINC01999-201ENST00000592917 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
LINC01999-201ENST00000592917 MSH5O43196 834 aa16.56■□□□□ 0.24
LINC01999-201ENST00000592917 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
LINC01999-201ENST00000592917 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
LINC01999-201ENST00000592917 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
LINC01999-201ENST00000592917 ADRA2BP18089 450 aa15.82■□□□□ 0.12
LINC01999-201ENST00000592917 NISCHQ9Y2I1 1504 aa14.75□□□□□ -0.05
LINC01999-201ENST00000592917 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
LINC01999-201ENST00000592917 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
LINC01999-201ENST00000592917 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
LINC01999-201ENST00000592917 CACNB1Q02641 598 aaPredicted RBP14.49□□□□□ -0.09
LINC01999-201ENST00000592917 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
LINC01999-201ENST00000592917 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
LINC01999-201ENST00000592917 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
LINC01999-201ENST00000592917 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
LINC01999-201ENST00000592917 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
LINC01999-201ENST00000592917 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
LINC01999-201ENST00000592917 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
LINC01999-201ENST00000592917 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
LINC01999-201ENST00000592917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC01999-201ENST00000592917 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
LINC01999-201ENST00000592917 POTEHQ6S545 545 aa13.19□□□□□ -0.3
LINC01999-201ENST00000592917 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
LINC01999-201ENST00000592917 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
LINC01999-201ENST00000592917 DSG3P32926 999 aa12.98□□□□□ -0.33
LINC01999-201ENST00000592917 CAPN15O75808 1086 aa12.97□□□□□ -0.33
LINC01999-201ENST00000592917 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
LINC01999-201ENST00000592917 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
LINC01999-201ENST00000592917 APLP2Q06481 763 aa12.69□□□□□ -0.38
LINC01999-201ENST00000592917 ABCC9O60706 1549 aa12.68□□□□□ -0.38
LINC01999-201ENST00000592917 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
LINC01999-201ENST00000592917 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
LINC01999-201ENST00000592917 ABCB7O75027 752 aa12.58□□□□□ -0.4
LINC01999-201ENST00000592917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
LINC01999-201ENST00000592917 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
LINC01999-201ENST00000592917 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
LINC01999-201ENST00000592917 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
LINC01999-201ENST00000592917 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
LINC01999-201ENST00000592917 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
LINC01999-201ENST00000592917 MYO15BQ96JP2 1530 aa12.34□□□□□ -0.43
LINC01999-201ENST00000592917 NACADO15069 1562 aa12.33□□□□□ -0.44
LINC01999-201ENST00000592917 KCNA4P22459 653 aa12.31□□□□□ -0.44
LINC01999-201ENST00000592917 ZCCHC6Q5VYS8 1495 aaKnown RBP12.31□□□□□ -0.44
LINC01999-201ENST00000592917 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
LINC01999-201ENST00000592917 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
LINC01999-201ENST00000592917 DCAF8L2P0C7V8 631 aa12.22□□□□□ -0.45
LINC01999-201ENST00000592917 POLA2Q14181 598 aa12.19□□□□□ -0.46
LINC01999-201ENST00000592917 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
LINC01999-201ENST00000592917 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
LINC01999-201ENST00000592917 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
LINC01999-201ENST00000592917 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
LINC01999-201ENST00000592917 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
LINC01999-201ENST00000592917 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
LINC01999-201ENST00000592917 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
LINC01999-201ENST00000592917 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
LINC01999-201ENST00000592917 HAX1O00165 279 aa11.89□□□□□ -0.51
LINC01999-201ENST00000592917 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
LINC01999-201ENST00000592917 SCRIBQ14160 1630 aa11.87□□□□□ -0.51
LINC01999-201ENST00000592917 PABPN1Q86U42 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC01999-201ENST00000592917 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
LINC01999-201ENST00000592917 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC01999-201ENST00000592917 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
LINC01999-201ENST00000592917 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
LINC01999-201ENST00000592917 FOXD4L1Q9NU39 408 aa11.69□□□□□ -0.54
LINC01999-201ENST00000592917 EVX2Q03828 476 aa11.6□□□□□ -0.55
LINC01999-201ENST00000592917 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.56
LINC01999-201ENST00000592917 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
LINC01999-201ENST00000592917 SPDYE2BA6NHP3 402 aa11.53□□□□□ -0.56
LINC01999-201ENST00000592917 SPDYE6P0CI01 402 aa11.53□□□□□ -0.56
LINC01999-201ENST00000592917 SPDYE2Q495Y8 402 aa11.53□□□□□ -0.56
LINC01999-201ENST00000592917 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
LINC01999-201ENST00000592917 PRKAR2AP13861 404 aaKnown RBP11.48□□□□□ -0.57
LINC01999-201ENST00000592917 FBLN2P98095 1184 aa11.46□□□□□ -0.57
LINC01999-201ENST00000592917 SPDYE1Q8NFV5 336 aaPredicted RBP11.45□□□□□ -0.58
LINC01999-201ENST00000592917 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
LINC01999-201ENST00000592917 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
LINC01999-201ENST00000592917 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
LINC01999-201ENST00000592917 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
LINC01999-201ENST00000592917 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
LINC01999-201ENST00000592917 SMARCA4P51532 1647 aa11.41□□□□□ -0.58
LINC01999-201ENST00000592917 LHX8Q68G74 356 aa11.39□□□□□ -0.59
LINC01999-201ENST00000592917 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
LINC01999-201ENST00000592917 SMARCA2P51531 1590 aa11.37□□□□□ -0.59
LINC01999-201ENST00000592917 GABBR2O75899 941 aa11.37□□□□□ -0.59
LINC01999-201ENST00000592917 ATAD2BQ9ULI0 1458 aa11.36□□□□□ -0.59
LINC01999-201ENST00000592917 PEG3Q9GZU2 1588 aa11.35□□□□□ -0.59
LINC01999-201ENST00000592917 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
LINC01999-201ENST00000592917 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
LINC01999-201ENST00000592917 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
LINC01999-201ENST00000592917 ZBTB22O15209 634 aa11.27□□□□□ -0.61
LINC01999-201ENST00000592917 SSUH2Q9Y2M2 353 aa11.27□□□□□ -0.61
LINC01999-201ENST00000592917 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
LINC01999-201ENST00000592917 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
LINC01999-201ENST00000592917 CHADLQ6NUI6 762 aa11.21□□□□□ -0.61
LINC01999-201ENST00000592917 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms