RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
SDF2-210ENST00000592250 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
SDF2-210ENST00000592250 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
SDF2-210ENST00000592250 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
SDF2-210ENST00000592250 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
SDF2-210ENST00000592250 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
SDF2-210ENST00000592250 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
SDF2-210ENST00000592250 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
SDF2-210ENST00000592250 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
SDF2-210ENST00000592250 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
SDF2-210ENST00000592250 WDR62O43379 1518 aa13.36□□□□□ -0.27
SDF2-210ENST00000592250 POTEHQ6S545 545 aa13.36□□□□□ -0.27
SDF2-210ENST00000592250 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
SDF2-210ENST00000592250 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
SDF2-210ENST00000592250 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
SDF2-210ENST00000592250 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
SDF2-210ENST00000592250 FKBP8Q14318 412 aa13.27□□□□□ -0.29
SDF2-210ENST00000592250 DNMBPQ6XZF7 1577 aa13.27□□□□□ -0.29
SDF2-210ENST00000592250 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
SDF2-210ENST00000592250 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
SDF2-210ENST00000592250 CUX1P39880 1505 aa13.23□□□□□ -0.29
SDF2-210ENST00000592250 PROM2Q8N271 834 aa13.23□□□□□ -0.29
SDF2-210ENST00000592250 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SDF2-210ENST00000592250 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
SDF2-210ENST00000592250 POLA1P09884 1462 aaPredicted RBP13.18□□□□□ -0.3
SDF2-210ENST00000592250 SYNJ1O43426 1573 aa13.17□□□□□ -0.3
SDF2-210ENST00000592250 TOP2BQ02880 1626 aa13.17□□□□□ -0.3
SDF2-210ENST00000592250 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
SDF2-210ENST00000592250 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
SDF2-210ENST00000592250 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
SDF2-210ENST00000592250 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
SDF2-210ENST00000592250 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
SDF2-210ENST00000592250 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
SDF2-210ENST00000592250 SOGA1O94964 1423 aa13.11□□□□□ -0.31
SDF2-210ENST00000592250 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
SDF2-210ENST00000592250 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
SDF2-210ENST00000592250 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
SDF2-210ENST00000592250 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
SDF2-210ENST00000592250 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.31
SDF2-210ENST00000592250 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
SDF2-210ENST00000592250 WDR97A6NE52 1622 aa13.07□□□□□ -0.32
SDF2-210ENST00000592250 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
SDF2-210ENST00000592250 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
SDF2-210ENST00000592250 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
SDF2-210ENST00000592250 AQRO60306 1485 aaKnown RBP eCLIP13.02□□□□□ -0.332e-8■■■□□ 18.6
SDF2-210ENST00000592250 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
SDF2-210ENST00000592250 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
SDF2-210ENST00000592250 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
SDF2-210ENST00000592250 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
SDF2-210ENST00000592250 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
SDF2-210ENST00000592250 GRIN2BQ13224 1484 aa12.94□□□□□ -0.34
SDF2-210ENST00000592250 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
SDF2-210ENST00000592250 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
SDF2-210ENST00000592250 EEA1Q15075 1411 aa12.91□□□□□ -0.34
SDF2-210ENST00000592250 HAX1O00165 279 aa12.91□□□□□ -0.34
SDF2-210ENST00000592250 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
SDF2-210ENST00000592250 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
SDF2-210ENST00000592250 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
SDF2-210ENST00000592250 MAGI1Q96QZ7 1491 aaPredicted RBP12.9□□□□□ -0.34
SDF2-210ENST00000592250 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
SDF2-210ENST00000592250 ARAP1Q96P48 1450 aa12.88□□□□□ -0.35
SDF2-210ENST00000592250 SYNJ2O15056 1496 aa12.85□□□□□ -0.35
SDF2-210ENST00000592250 IGF1RP08069 1367 aa12.85□□□□□ -0.35
SDF2-210ENST00000592250 FAM9AQ8IZU1 332 aaPredicted RBP12.85□□□□□ -0.35
SDF2-210ENST00000592250 LOC105371045A0A1W2PR82 267 aa12.84□□□□□ -0.35
SDF2-210ENST00000592250 EVX2Q03828 476 aa12.84□□□□□ -0.35
SDF2-210ENST00000592250 MIER1Q8N108 512 aa12.84□□□□□ -0.35
SDF2-210ENST00000592250 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
SDF2-210ENST00000592250 CHD1O14646 1710 aa12.83□□□□□ -0.36
SDF2-210ENST00000592250 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
SDF2-210ENST00000592250 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
SDF2-210ENST00000592250 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
SDF2-210ENST00000592250 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
SDF2-210ENST00000592250 CUL7Q14999 1698 aa12.8□□□□□ -0.36
SDF2-210ENST00000592250 CHMP7Q8WUX9 453 aaPredicted RBP12.79□□□□□ -0.36
SDF2-210ENST00000592250 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
SDF2-210ENST00000592250 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
SDF2-210ENST00000592250 PRXQ9BXM0 1461 aa12.76□□□□□ -0.37
SDF2-210ENST00000592250 KIF21BO75037 1637 aa12.76□□□□□ -0.37
SDF2-210ENST00000592250 CARMIL1Q5VZK9 1371 aa12.75□□□□□ -0.37
SDF2-210ENST00000592250 NUP160Q12769 1436 aa12.73□□□□□ -0.37
SDF2-210ENST00000592250 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
SDF2-210ENST00000592250 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
SDF2-210ENST00000592250 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
SDF2-210ENST00000592250 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
SDF2-210ENST00000592250 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
SDF2-210ENST00000592250 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
SDF2-210ENST00000592250 GOLGA3Q08378 1498 aa12.7□□□□□ -0.38
SDF2-210ENST00000592250 RAPGEF2Q9Y4G8 1499 aa12.7□□□□□ -0.38
SDF2-210ENST00000592250 TNIKQ9UKE5 1360 aa12.69□□□□□ -0.38
SDF2-210ENST00000592250 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
SDF2-210ENST00000592250 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
SDF2-210ENST00000592250 SHROOM2Q13796 1616 aa12.63□□□□□ -0.39
SDF2-210ENST00000592250 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
SDF2-210ENST00000592250 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
SDF2-210ENST00000592250 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
SDF2-210ENST00000592250 IQGAP2Q13576 1575 aa12.58□□□□□ -0.4
SDF2-210ENST00000592250 JPH4Q96JJ6 628 aa12.58□□□□□ -0.4
SDF2-210ENST00000592250 CTTNBP2Q8WZ74 1663 aa12.57□□□□□ -0.4
SDF2-210ENST00000592250 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms