RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
MBD3-207ENST00000590550 TIAM1Q13009 1591 aa27.84■■■□□ 2.05
MBD3-207ENST00000590550 RAB3GAP2Q9H2M9 1393 aa27.83■■■□□ 2.05
MBD3-207ENST00000590550 FAM50AQ14320 339 aaKnown RBP27.82■■■□□ 2.04
MBD3-207ENST00000590550 PHLDB1Q86UU1 1377 aa27.8■■■□□ 2.04
MBD3-207ENST00000590550 NESP48681 1621 aa27.78■■■□□ 2.04
MBD3-207ENST00000590550 LRRC9Q6ZRR7 1453 aa27.77■■■□□ 2.04
MBD3-207ENST00000590550 SUPT16HQ9Y5B9 1047 aaKnown RBP27.76■■■□□ 2.03
MBD3-207ENST00000590550 FHOD3Q2V2M9 1422 aa27.74■■■□□ 2.03
MBD3-207ENST00000590550 TSHZ2Q9NRE2 1034 aa27.73■■■□□ 2.03
MBD3-207ENST00000590550 PCF11O94913 1555 aaKnown RBP27.7■■■□□ 2.02
MBD3-207ENST00000590550 POLA1P09884 1462 aaPredicted RBP27.69■■■□□ 2.02
MBD3-207ENST00000590550 MAPKBP1O60336 1514 aa27.67■■■□□ 2.02
MBD3-207ENST00000590550 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
MBD3-207ENST00000590550 SIN3AQ96ST3 1273 aa27.66■■■□□ 2.02
MBD3-207ENST00000590550 MAP3K1Q13233 1512 aa27.66■■■□□ 2.02
MBD3-207ENST00000590550 TOPBP1Q92547 1522 aa27.66■■■□□ 2.02
MBD3-207ENST00000590550 SETD5Q9C0A6 1442 aa27.65■■■□□ 2.02
MBD3-207ENST00000590550 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
MBD3-207ENST00000590550 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
MBD3-207ENST00000590550 CFAP43Q8NDM7 1665 aa27.54■■■□□ 2
MBD3-207ENST00000590550 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
MBD3-207ENST00000590550 DNAJC5BQ9UF47 199 aa27.53■■■□□ 2
MBD3-207ENST00000590550 KCNH8Q96L42 1107 aa27.52■■■□□ 2
MBD3-207ENST00000590550 FYCO1Q9BQS8 1478 aa27.47■■□□□ 1.99
MBD3-207ENST00000590550 HIRIP3Q9BW71 556 aaPredicted RBP27.47■■□□□ 1.99
MBD3-207ENST00000590550 CASKIN1Q8WXD9 1431 aa27.47■■□□□ 1.99
MBD3-207ENST00000590550 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
MBD3-207ENST00000590550 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
MBD3-207ENST00000590550 EFCAB5A4FU69 1503 aa27.42■■□□□ 1.98
MBD3-207ENST00000590550 DDX10Q13206 875 aaKnown RBP27.41■■□□□ 1.98
MBD3-207ENST00000590550 CUL7Q14999 1698 aa27.4■■□□□ 1.98
MBD3-207ENST00000590550 CTTNBP2Q8WZ74 1663 aa27.39■■□□□ 1.98
MBD3-207ENST00000590550 MTUS2Q5JR59 1369 aa27.37■■□□□ 1.97
MBD3-207ENST00000590550 FMN1Q68DA7 1419 aa27.35■■□□□ 1.97
MBD3-207ENST00000590550 FGD6Q6ZV73 1430 aa27.34■■□□□ 1.97
MBD3-207ENST00000590550 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
MBD3-207ENST00000590550 AQRO60306 1485 aaKnown RBP eCLIP27.33■■□□□ 1.977e-7■■■□□ 18.2
MBD3-207ENST00000590550 BCANQ96GW7 911 aa27.33■■□□□ 1.97
MBD3-207ENST00000590550 GAPVD1Q14C86 1478 aa27.31■■□□□ 1.96
MBD3-207ENST00000590550 PTPRKQ15262 1439 aa27.3■■□□□ 1.96
MBD3-207ENST00000590550 LAMC3Q9Y6N6 1575 aa27.27■■□□□ 1.96
MBD3-207ENST00000590550 PPP1R15AO75807 674 aaPredicted RBP27.25■■□□□ 1.95
MBD3-207ENST00000590550 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
MBD3-207ENST00000590550 LRRIQ1Q96JM4 1722 aa27.23■■□□□ 1.95
MBD3-207ENST00000590550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.22■■□□□ 1.953e-7■□□□□ 9.3
MBD3-207ENST00000590550 ARID3CA6NKF2 412 aa27.22■■□□□ 1.95
MBD3-207ENST00000590550 CCDC18Q5T9S5 1454 aa27.21■■□□□ 1.95
MBD3-207ENST00000590550 PRKCSHP14314 528 aaPredicted RBP27.21■■□□□ 1.95
MBD3-207ENST00000590550 NCOA2Q15596 1464 aa27.2■■□□□ 1.94
MBD3-207ENST00000590550 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
MBD3-207ENST00000590550 SAMD9Q5K651 1589 aa27.19■■□□□ 1.94
MBD3-207ENST00000590550 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
MBD3-207ENST00000590550 CHIC2Q9UKJ5 165 aa27.16■■□□□ 1.94
MBD3-207ENST00000590550 TONSLQ96HA7 1378 aa27.15■■□□□ 1.94
MBD3-207ENST00000590550 TIMELESSQ9UNS1 1208 aa27.14■■□□□ 1.94
MBD3-207ENST00000590550 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.94
MBD3-207ENST00000590550 MYOM3Q5VTT5 1437 aa27.14■■□□□ 1.93
MBD3-207ENST00000590550 RRP7BPQ9NSQ0 103 aa27.13■■□□□ 1.93
MBD3-207ENST00000590550 HFM1A2PYH4 1435 aa27.13■■□□□ 1.93
MBD3-207ENST00000590550 NAIPQ13075 1403 aa27.1■■□□□ 1.93
MBD3-207ENST00000590550 PTPN23Q9H3S7 1636 aa27.1■■□□□ 1.93
MBD3-207ENST00000590550 MAGI3Q5TCQ9 1506 aa27.09■■□□□ 1.93
MBD3-207ENST00000590550 UACAQ9BZF9 1416 aa27.08■■□□□ 1.93
MBD3-207ENST00000590550 RBM19Q9Y4C8 960 aaKnown RBP27.05■■□□□ 1.92
MBD3-207ENST00000590550 SUPT6HQ7KZ85 1726 aaKnown RBP27.03■■□□□ 1.92
MBD3-207ENST00000590550 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
MBD3-207ENST00000590550 FKBP8Q14318 412 aa27.03■■□□□ 1.92
MBD3-207ENST00000590550 EHBP1L1Q8N3D4 1523 aa27.01■■□□□ 1.91
MBD3-207ENST00000590550 TRIM52Q96A61 297 aa27.01■■□□□ 1.91
MBD3-207ENST00000590550 ANP32CO43423 234 aa26.99■■□□□ 1.91
MBD3-207ENST00000590550 UGGT2Q9NYU1 1516 aa26.98■■□□□ 1.91
MBD3-207ENST00000590550 CDK13Q14004 1512 aaKnown RBP26.96■■□□□ 1.91
MBD3-207ENST00000590550 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
MBD3-207ENST00000590550 FOXD1Q16676 465 aa26.92■■□□□ 1.9
MBD3-207ENST00000590550 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
MBD3-207ENST00000590550 EPRSP07814 1512 aaKnown RBP26.9■■□□□ 1.9
MBD3-207ENST00000590550 PBRM1Q86U86 1689 aa26.89■■□□□ 1.9
MBD3-207ENST00000590550 IQGAP2Q13576 1575 aa26.89■■□□□ 1.9
MBD3-207ENST00000590550 KDM6BO15054 1643 aa26.88■■□□□ 1.89
MBD3-207ENST00000590550 MSH5O43196 834 aa26.86■■□□□ 1.89
MBD3-207ENST00000590550 KDM5BQ9UGL1 1544 aa26.86■■□□□ 1.89
MBD3-207ENST00000590550 HECW1Q76N89 1606 aa26.85■■□□□ 1.89
MBD3-207ENST00000590550 DENND4BO75064 1496 aaPredicted RBP26.85■■□□□ 1.89
MBD3-207ENST00000590550 CCER2I3L3R5 266 aa26.85■■□□□ 1.89
MBD3-207ENST00000590550 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.89
MBD3-207ENST00000590550 ADAMTS12P58397 1594 aa26.83■■□□□ 1.89
MBD3-207ENST00000590550 TCOF1Q13428 1488 aaKnown RBP26.8■■□□□ 1.88
MBD3-207ENST00000590550 ZNF644Q9H582 1327 aaPredicted RBP26.8■■□□□ 1.88
MBD3-207ENST00000590550 MPHOSPH9Q99550 1183 aa26.8■■□□□ 1.88
MBD3-207ENST00000590550 HSPA5P11021 654 aaKnown RBP26.79■■□□□ 1.88
MBD3-207ENST00000590550 WDR62O43379 1518 aa26.77■■□□□ 1.88
MBD3-207ENST00000590550 MRC2Q9UBG0 1479 aa26.76■■□□□ 1.88
MBD3-207ENST00000590550 WASHC2AQ641Q2 1341 aa26.74■■□□□ 1.87
MBD3-207ENST00000590550 L3MBTL2Q969R5 705 aa26.74■■□□□ 1.87
MBD3-207ENST00000590550 NEFLP07196 543 aa26.73■■□□□ 1.87
MBD3-207ENST00000590550 GCC2Q8IWJ2 1684 aa26.72■■□□□ 1.87
MBD3-207ENST00000590550 ERICH6Q7L0X2 663 aa26.72■■□□□ 1.87
MBD3-207ENST00000590550 MIA2Q96PC5 1412 aa26.7■■□□□ 1.86
MBD3-207ENST00000590550 EIF4G2P78344 907 aaKnown RBP eCLIP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms