RNA–Protein interactions for RNA: ENST00000589553.5

TMC6-212, Transcript of transmembrane channel like 6, humanhuman

TSL 2 BASIC

Gene TMC6, Length 2,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-212ENST00000589553 MIER1Q8N108 512 aa30.89■■■□□ 2.54
TMC6-212ENST00000589553 LRRC9Q6ZRR7 1453 aa30.87■■■□□ 2.53
TMC6-212ENST00000589553 PCF11O94913 1555 aaKnown RBP30.86■■■□□ 2.53
TMC6-212ENST00000589553 FHAD1B1AJZ9 1412 aa30.83■■■□□ 2.53
TMC6-212ENST00000589553 FHOD3Q2V2M9 1422 aa30.81■■■□□ 2.52
TMC6-212ENST00000589553 PHLDB1Q86UU1 1377 aa30.79■■■□□ 2.52
TMC6-212ENST00000589553 GTF3C3Q9Y5Q9 886 aa30.79■■■□□ 2.52
TMC6-212ENST00000589553 YTHDC1Q96MU7 727 aaKnown RBP30.79■■■□□ 2.52
TMC6-212ENST00000589553 CFAP43Q8NDM7 1665 aa30.79■■■□□ 2.52
TMC6-212ENST00000589553 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
TMC6-212ENST00000589553 CUL7Q14999 1698 aa30.77■■■□□ 2.52
TMC6-212ENST00000589553 LAMC3Q9Y6N6 1575 aa30.76■■■□□ 2.51
TMC6-212ENST00000589553 ATP1B4Q9UN42 357 aaPredicted RBP30.76■■■□□ 2.51
TMC6-212ENST00000589553 RAB3GAP2Q9H2M9 1393 aa30.74■■■□□ 2.51
TMC6-212ENST00000589553 WDR97A6NE52 1622 aa30.72■■■□□ 2.51
TMC6-212ENST00000589553 CTTNBP2Q8WZ74 1663 aa30.71■■■□□ 2.51
TMC6-212ENST00000589553 EFCAB5A4FU69 1503 aa30.7■■■□□ 2.51
TMC6-212ENST00000589553 DNAJC5BQ9UF47 199 aa30.68■■■□□ 2.5
TMC6-212ENST00000589553 FYCO1Q9BQS8 1478 aa30.66■■■□□ 2.5
TMC6-212ENST00000589553 FAM50AQ14320 339 aaKnown RBP30.65■■■□□ 2.5
TMC6-212ENST00000589553 TDRD9Q8NDG6 1382 aaKnown RBP30.65■■■□□ 2.5
TMC6-212ENST00000589553 MAPKBP1O60336 1514 aa30.62■■■□□ 2.49
TMC6-212ENST00000589553 CASKIN1Q8WXD9 1431 aa30.62■■■□□ 2.49
TMC6-212ENST00000589553 ABCA5Q8WWZ7 1642 aa30.61■■■□□ 2.49
TMC6-212ENST00000589553 SETD5Q9C0A6 1442 aa30.61■■■□□ 2.49
TMC6-212ENST00000589553 AQRO60306 1485 aaKnown RBP eCLIP30.58■■■□□ 2.491e-9■■■■■ 33.7
TMC6-212ENST00000589553 PDS5BQ9NTI5 1447 aa30.54■■■□□ 2.48
TMC6-212ENST00000589553 GAPVD1Q14C86 1478 aa30.54■■■□□ 2.48
TMC6-212ENST00000589553 KIF21AQ7Z4S6 1674 aa30.53■■■□□ 2.48
TMC6-212ENST00000589553 SNAPC4Q5SXM2 1469 aa30.51■■■□□ 2.47
TMC6-212ENST00000589553 FMN1Q68DA7 1419 aa30.5■■■□□ 2.47
TMC6-212ENST00000589553 SAMD9Q5K651 1589 aa30.46■■■□□ 2.47
TMC6-212ENST00000589553 LRRIQ1Q96JM4 1722 aa30.4■■■□□ 2.46
TMC6-212ENST00000589553 PELP1Q8IZL8 1130 aaKnown RBP30.39■■■□□ 2.46
TMC6-212ENST00000589553 TARBP1Q13395 1621 aaKnown RBP30.38■■■□□ 2.45
TMC6-212ENST00000589553 SIN3AQ96ST3 1273 aa30.37■■■□□ 2.45
TMC6-212ENST00000589553 FGD6Q6ZV73 1430 aa30.37■■■□□ 2.45
TMC6-212ENST00000589553 MTUS2Q5JR59 1369 aa30.36■■■□□ 2.45
TMC6-212ENST00000589553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.36■■■□□ 2.451e-7■■□□□ 13.2
TMC6-212ENST00000589553 GRIN2BQ13224 1484 aa30.33■■■□□ 2.45
TMC6-212ENST00000589553 NCOA2Q15596 1464 aa30.25■■■□□ 2.43
TMC6-212ENST00000589553 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
TMC6-212ENST00000589553 PTPRKQ15262 1439 aa30.24■■■□□ 2.43
TMC6-212ENST00000589553 THOC2Q8NI27 1593 aaKnown RBP30.22■■■□□ 2.43
TMC6-212ENST00000589553 MYOM3Q5VTT5 1437 aa30.18■■■□□ 2.42
TMC6-212ENST00000589553 SUPT6HQ7KZ85 1726 aaKnown RBP30.17■■■□□ 2.42
TMC6-212ENST00000589553 EHBP1L1Q8N3D4 1523 aa30.17■■■□□ 2.42
TMC6-212ENST00000589553 CCDC18Q5T9S5 1454 aa30.17■■■□□ 2.42
TMC6-212ENST00000589553 MAGI3Q5TCQ9 1506 aa30.16■■■□□ 2.42
TMC6-212ENST00000589553 ADAMTS12P58397 1594 aa30.14■■■□□ 2.42
TMC6-212ENST00000589553 HFM1A2PYH4 1435 aa30.14■■■□□ 2.41
TMC6-212ENST00000589553 PTPN23Q9H3S7 1636 aa30.13■■■□□ 2.41
TMC6-212ENST00000589553 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
TMC6-212ENST00000589553 IQGAP2Q13576 1575 aa30.11■■■□□ 2.41
TMC6-212ENST00000589553 UGGT2Q9NYU1 1516 aa30.1■■■□□ 2.41
TMC6-212ENST00000589553 TIMELESSQ9UNS1 1208 aa30.08■■■□□ 2.41
TMC6-212ENST00000589553 ARHGEF11O15085 1522 aa30.07■■■□□ 2.4
TMC6-212ENST00000589553 NAIPQ13075 1403 aa30.06■■■□□ 2.4
TMC6-212ENST00000589553 HECW1Q76N89 1606 aa30.05■■■□□ 2.4
TMC6-212ENST00000589553 UACAQ9BZF9 1416 aa30.04■■■□□ 2.4
TMC6-212ENST00000589553 PPP1R15AO75807 674 aaPredicted RBP30.04■■■□□ 2.4
TMC6-212ENST00000589553 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
TMC6-212ENST00000589553 KCNH8Q96L42 1107 aa30■■■□□ 2.39
TMC6-212ENST00000589553 EPRSP07814 1512 aaKnown RBP30■■■□□ 2.39
TMC6-212ENST00000589553 DDX10Q13206 875 aaKnown RBP30■■■□□ 2.39
TMC6-212ENST00000589553 HIRIP3Q9BW71 556 aaPredicted RBP29.99■■■□□ 2.39
TMC6-212ENST00000589553 CDK13Q14004 1512 aaKnown RBP29.99■■■□□ 2.39
TMC6-212ENST00000589553 ARID3CA6NKF2 412 aa29.98■■■□□ 2.39
TMC6-212ENST00000589553 TONSLQ96HA7 1378 aa29.96■■■□□ 2.39
TMC6-212ENST00000589553 WDR62O43379 1518 aa29.95■■■□□ 2.38
TMC6-212ENST00000589553 TCOF1Q13428 1488 aaKnown RBP29.93■■■□□ 2.38
TMC6-212ENST00000589553 RRP7BPQ9NSQ0 103 aa29.92■■■□□ 2.38
TMC6-212ENST00000589553 CHIC2Q9UKJ5 165 aa29.92■■■□□ 2.38
TMC6-212ENST00000589553 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
TMC6-212ENST00000589553 GCC2Q8IWJ2 1684 aa29.83■■■□□ 2.37
TMC6-212ENST00000589553 KDM6BO15054 1643 aa29.82■■■□□ 2.36
TMC6-212ENST00000589553 DISP1Q96F81 1524 aa29.81■■■□□ 2.36
TMC6-212ENST00000589553 KIAA0556O60303 1618 aa29.8■■■□□ 2.36
TMC6-212ENST00000589553 KIAA0586Q9BVV6 1533 aa29.79■■■□□ 2.36
TMC6-212ENST00000589553 MIA2Q96PC5 1412 aa29.79■■■□□ 2.36
TMC6-212ENST00000589553 KDM5BQ9UGL1 1544 aa29.78■■■□□ 2.36
TMC6-212ENST00000589553 DENND4BO75064 1496 aaPredicted RBP29.78■■■□□ 2.36
TMC6-212ENST00000589553 EIF4G3O43432 1585 aaKnown RBP29.78■■■□□ 2.36
TMC6-212ENST00000589553 SUPT16HQ9Y5B9 1047 aaKnown RBP29.75■■■□□ 2.35
TMC6-212ENST00000589553 GRIN2AQ12879 1464 aa29.75■■■□□ 2.35
TMC6-212ENST00000589553 AKNAQ7Z591 1439 aa29.74■■■□□ 2.35
TMC6-212ENST00000589553 TRIM52Q96A61 297 aa29.74■■■□□ 2.35
TMC6-212ENST00000589553 NUP153P49790 1475 aaKnown RBP29.72■■■□□ 2.35
TMC6-212ENST00000589553 RAPGEF6Q8TEU7 1601 aa29.67■■■□□ 2.34
TMC6-212ENST00000589553 DAPK1P53355 1430 aa29.63■■■□□ 2.33
TMC6-212ENST00000589553 ZNF644Q9H582 1327 aaPredicted RBP29.63■■■□□ 2.33
TMC6-212ENST00000589553 ERCC6Q03468 1493 aa29.62■■■□□ 2.33
TMC6-212ENST00000589553 ANP32CO43423 234 aa29.62■■■□□ 2.33
TMC6-212ENST00000589553 MPHOSPH9Q99550 1183 aa29.62■■■□□ 2.33
TMC6-212ENST00000589553 FOXD1Q16676 465 aa29.6■■■□□ 2.33
TMC6-212ENST00000589553 ABCC5O15440 1437 aa29.59■■■□□ 2.33
TMC6-212ENST00000589553 CEP170Q5SW79 1584 aa29.58■■■□□ 2.33
TMC6-212ENST00000589553 DNMT1P26358 1616 aaKnown RBP29.58■■■□□ 2.33
TMC6-212ENST00000589553 CCER2I3L3R5 266 aa29.56■■■□□ 2.32
TMC6-212ENST00000589553 MAGI1Q96QZ7 1491 aaPredicted RBP29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms