RNA–Protein interactions for RNA: ENST00000587995.5

CACNA2D4-222, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

TSL 5 BASIC

Gene CACNA2D4, Length 3,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-222	ENST00000587995	FAM9B	Q8IZU0	186 aa		13.65	□□□□□ -0.22
CACNA2D4-222	ENST00000587995	RAB3GAP2	Q9H2M9	1393 aa		13.64	□□□□□ -0.23
CACNA2D4-222	ENST00000587995	SYNJ1	O43426	1573 aa		13.61	□□□□□ -0.23
CACNA2D4-222	ENST00000587995	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.58	□□□□□ -0.24
CACNA2D4-222	ENST00000587995	KIF21B	O75037	1637 aa		13.56	□□□□□ -0.24
CACNA2D4-222	ENST00000587995	SETD5	Q9C0A6	1442 aa		13.55	□□□□□ -0.24
CACNA2D4-222	ENST00000587995	MYT1L	Q9UL68	1186 aa		13.54	□□□□□ -0.24
CACNA2D4-222	ENST00000587995	MRS2	Q9HD23	443 aa		13.51	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	SALL2	Q9Y467	1007 aa	Predicted RBP	13.51	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	FOXD1	Q16676	465 aa		13.51	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	FHOD3	Q2V2M9	1422 aa		13.5	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	ARAP1	Q96P48	1450 aa		13.5	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	BCL11A	Q9H165	835 aa		13.49	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	TDRD9	Q8NDG6	1382 aa	Known RBP	13.49	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	FHAD1	B1AJZ9	1412 aa		13.47	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.47	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	PPP1R15A	O75807	674 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	KDM2A	Q9Y2K7	1162 aa		13.47	□□□□□ -0.25
CACNA2D4-222	ENST00000587995	IGF1R	P08069	1367 aa		13.46	□□□□□ -0.26
CACNA2D4-222	ENST00000587995	TSHZ2	Q9NRE2	1034 aa		13.44	□□□□□ -0.26
CACNA2D4-222	ENST00000587995	CADPS	Q9ULU8	1353 aa		13.44	□□□□□ -0.26
CACNA2D4-222	ENST00000587995	ARHGAP35	Q9NRY4	1499 aa		13.41	□□□□□ -0.26
CACNA2D4-222	ENST00000587995	PHLDB1	Q86UU1	1377 aa		13.41	□□□□□ -0.26
CACNA2D4-222	ENST00000587995	ANP32E	Q9BTT0	268 aa		13.41	□□□□□ -0.26
CACNA2D4-222	ENST00000587995	BICRA	Q9NZM4	1560 aa		13.4	□□□□□ -0.26
CACNA2D4-222	ENST00000587995	EIF4G1	Q04637	1599 aa	Known RBP	13.4	□□□□□ -0.26
CACNA2D4-222	ENST00000587995	HSPA5	P11021	654 aa	Known RBP	13.39	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	PRX	Q9BXM0	1461 aa		13.38	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.38	□□□□□ -0.27	7e-9	■□□□□ 9.3
CACNA2D4-222	ENST00000587995	TMC1	Q8TDI8	760 aa		13.37	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	TIMELESS	Q9UNS1	1208 aa		13.36	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	NPM2	Q86SE8	214 aa	Known RBP	13.35	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.35	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	RAD54L2	Q9Y4B4	1467 aa		13.34	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	FGD5	Q6ZNL6	1462 aa		13.34	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	CUX1	P39880	1505 aa		13.34	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	B4GALNT3	Q6L9W6	998 aa		13.34	□□□□□ -0.27
CACNA2D4-222	ENST00000587995	CCER2	I3L3R5	266 aa		13.33	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.33	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	RBM19	Q9Y4C8	960 aa	Known RBP	13.33	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	RGL3	Q3MIN7	710 aa		13.32	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	CCDC136	Q96JN2	1154 aa		13.32	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	TOP2B	Q02880	1626 aa		13.32	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	NCAPD3	P42695	1498 aa		13.32	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	RRBP1	Q9P2E9	1410 aa	Known RBP	13.32	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	L3MBTL2	Q969R5	705 aa		13.31	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	UNC13A	Q9UPW8	1703 aa		13.31	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	MPHOSPH9	Q99550	1183 aa		13.3	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	TSPY4	P0CV99	314 aa		13.3	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	TSPY10	P0CW01	314 aa		13.3	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	RTL5	Q5HYW3	569 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	DAXX	Q9UER7	740 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	NBR1	Q14596	966 aa		13.29	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	FANCD2	Q9BXW9	1451 aa		13.29	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	FMN1	Q68DA7	1419 aa		13.28	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	LRRC9	Q6ZRR7	1453 aa		13.28	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	ERICH3	Q5RHP9	1530 aa		13.28	□□□□□ -0.28
CACNA2D4-222	ENST00000587995	CFTR	P13569	1480 aa		13.27	□□□□□ -0.29
CACNA2D4-222	ENST00000587995	CARD11	Q9BXL7	1154 aa		13.24	□□□□□ -0.29
CACNA2D4-222	ENST00000587995	ANP32A	P39687	249 aa	Known RBP	13.23	□□□□□ -0.29
CACNA2D4-222	ENST00000587995	PLEKHD1	A6NEE1	506 aa		13.23	□□□□□ -0.29
CACNA2D4-222	ENST00000587995	CCDC18	Q5T9S5	1454 aa		13.22	□□□□□ -0.29
CACNA2D4-222	ENST00000587995	PPP4R2	Q9NY27	417 aa		13.21	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	PKD2	Q13563	968 aa		13.2	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	WDR97	A6NE52	1622 aa		13.19	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	ZNF644	Q9H582	1327 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	FGD6	Q6ZV73	1430 aa		13.19	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	NES	P48681	1621 aa		13.19	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	DCAF11	Q8TEB1	546 aa		13.19	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	PEG3	Q9GZU2	1588 aa		13.17	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	DNAJC5B	Q9UF47	199 aa		13.16	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	SENP3	Q9H4L4	574 aa	Predicted RBP	13.15	□□□□□ -0.3
CACNA2D4-222	ENST00000587995	TIAM1	Q13009	1591 aa		13.14	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	WASHC2A	Q641Q2	1341 aa		13.14	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	CHGA	P10645	457 aa	Known RBP	13.14	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	CCDC184	Q52MB2	194 aa		13.14	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	PDS5B	Q9NTI5	1447 aa		13.13	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	CC2D1B	Q5T0F9	858 aa	Known RBP	13.13	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	CASKIN1	Q8WXD9	1431 aa		13.11	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	UACA	Q9BZF9	1416 aa		13.1	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	GAPVD1	Q14C86	1478 aa		13.1	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	MYOM3	Q5VTT5	1437 aa		13.09	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	NCOA2	Q15596	1464 aa		13.09	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	HMGXB3	Q12766	1538 aa		13.09	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	CANX	P27824	592 aa	Known RBP	13.09	□□□□□ -0.31
CACNA2D4-222	ENST00000587995	NUP155	O75694	1391 aa		13.08	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	POLA1	P09884	1462 aa	Predicted RBP	13.07	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.07	□□□□□ -0.32	2e-7	■■■■□ 25
CACNA2D4-222	ENST00000587995	AQR	O60306	1485 aa	Known RBP eCLIP	13.07	□□□□□ -0.32	1e-6	■■■■□ 23.9
CACNA2D4-222	ENST00000587995	NBPF8	Q3BBV2	869 aa		13.06	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	WDR43	Q15061	677 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	ST20-MTHFS	A0A0A6YYL1	179 aa		13.04	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	BIVM-ERCC5	R4GMW8	1640 aa		13.04	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	PCF11	O94913	1555 aa	Known RBP	13.04	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	TOPBP1	Q92547	1522 aa		13.03	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	C11orf95	C9JLR9	678 aa	Predicted RBP	13.03	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	FYCO1	Q9BQS8	1478 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms