RNA–Protein interactions for RNA: ENST00000587995.5

CACNA2D4-222, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5 BASIC

Gene CACNA2D4, Length 3,883 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-222ENST00000587995 NSUN2Q08J23 767 aaKnown RBP eCLIP10.06□□□□□ -0.81e-30■■■■■ 106.9
CACNA2D4-222ENST00000587995 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.383e-9■■■■■ 101.8
CACNA2D4-222ENST00000587995 RBFOX2O43251 390 aaKnown RBP eCLIP8.07□□□□□ -1.128e-8■■■■■ 84.8
CACNA2D4-222ENST00000587995 SLBPQ14493 270 aaKnown RBP eCLIP9.5□□□□□ -0.898e-12■■■■■ 57.7
CACNA2D4-222ENST00000587995 TRA2AQ13595 282 aaKnown RBP eCLIP8.43□□□□□ -1.064e-10■■■■■ 54.9
CACNA2D4-222ENST00000587995 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.6□□□□□ -0.711e-6■■■■■ 39.7
CACNA2D4-222ENST00000587995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.27□□□□□ -1.096e-7■■■■■ 34.9
CACNA2D4-222ENST00000587995 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.89□□□□□ -0.834e-7■■■■■ 32.3
CACNA2D4-222ENST00000587995 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.591e-10■■■■■ 30.1
CACNA2D4-222ENST00000587995 SF3A3Q12874 501 aaKnown RBP eCLIP10.92□□□□□ -0.665e-7■■■■■ 27.9
CACNA2D4-222ENST00000587995 RBM22Q9NW64 420 aaKnown RBP eCLIP10.01□□□□□ -0.812e-6■■■■□ 25.8
CACNA2D4-222ENST00000587995 EFTUD2Q15029 972 aaKnown RBP eCLIP10.25□□□□□ -0.779e-7■■■■□ 25.7
CACNA2D4-222ENST00000587995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.58□□□□□ -0.568e-8■■■■□ 25.3
CACNA2D4-222ENST00000587995 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■■■□ 25
CACNA2D4-222ENST00000587995 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■■■■□ 23.9
CACNA2D4-222ENST00000587995 MATR3P43243 847 aaKnown RBP eCLIP11.15□□□□□ -0.626e-6■■■■□ 21.9
CACNA2D4-222ENST00000587995 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■■■■□ 21.8
CACNA2D4-222ENST00000587995 NCBP2P52298 156 aaKnown RBP eCLIP9.39□□□□□ -0.913e-7■■■□□ 19
CACNA2D4-222ENST00000587995 HNRNPLP14866 589 aaKnown RBP eCLIP10□□□□□ -0.815e-7■■■□□ 18.9
CACNA2D4-222ENST00000587995 SMNDC1O75940 238 aaKnown RBP eCLIP9.97□□□□□ -0.814e-7■■■□□ 17.2
CACNA2D4-222ENST00000587995 SF3B4Q15427 424 aaKnown RBP eCLIP9.29□□□□□ -0.922e-11■■■□□ 16.3
CACNA2D4-222ENST00000587995 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.61□□□□□ -0.711e-11■■■□□ 16.1
CACNA2D4-222ENST00000587995 SRSF1Q07955 248 aaKnown RBP eCLIP7.64□□□□□ -1.194e-9■■■□□ 15.5
CACNA2D4-222ENST00000587995 FXR2P51116 673 aaKnown RBP eCLIP10.63□□□□□ -0.716e-7■■■□□ 14.8
CACNA2D4-222ENST00000587995 PPIGQ13427 754 aaKnown RBP eCLIP9.44□□□□□ -0.91e-9■■■□□ 14.6
CACNA2D4-222ENST00000587995 PCBP2Q15366 365 aaKnown RBP eCLIP9.5□□□□□ -0.893e-6■■■□□ 14.6
CACNA2D4-222ENST00000587995 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.65□□□□□ -0.861e-6■■□□□ 13.5
CACNA2D4-222ENST00000587995 PRPF4O43172 522 aaKnown RBP eCLIP10.1□□□□□ -0.791e-7■□□□□ 11.2
CACNA2D4-222ENST00000587995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.89□□□□□ -0.357e-7■□□□□ 10.9
CACNA2D4-222ENST00000587995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.277e-9■□□□□ 9.3
CACNA2D4-222ENST00000587995 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.04□□□□□ -0.84e-6■□□□□ 8.2
Retrieved 31 of 31 RNA–protein pairs in 6.4 ms