RNA–Protein interactions for RNA: ENST00000583899.5

EIF4A1-230, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-230ENST00000583899 SPDYE2BA6NHP3 402 aa11.62□□□□□ -0.55
EIF4A1-230ENST00000583899 SPDYE6P0CI01 402 aa11.62□□□□□ -0.55
EIF4A1-230ENST00000583899 SPDYE2Q495Y8 402 aa11.62□□□□□ -0.55
EIF4A1-230ENST00000583899 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
EIF4A1-230ENST00000583899 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
EIF4A1-230ENST00000583899 SSUH2Q9Y2M2 353 aa11.53□□□□□ -0.56
EIF4A1-230ENST00000583899 PITPNM1O00562 1244 aa11.51□□□□□ -0.57
EIF4A1-230ENST00000583899 TOPBP1Q92547 1522 aa11.48□□□□□ -0.57
EIF4A1-230ENST00000583899 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
EIF4A1-230ENST00000583899 ZNF692Q9BU19 519 aaPredicted RBP11.45□□□□□ -0.58
EIF4A1-230ENST00000583899 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
EIF4A1-230ENST00000583899 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
EIF4A1-230ENST00000583899 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.581e-7■□□□□ 8.6
EIF4A1-230ENST00000583899 DNAJC5Q9H3Z4 198 aa11.41□□□□□ -0.58
EIF4A1-230ENST00000583899 WDR97A6NE52 1622 aa11.41□□□□□ -0.58
EIF4A1-230ENST00000583899 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
EIF4A1-230ENST00000583899 CUX1P39880 1505 aa11.4□□□□□ -0.58
EIF4A1-230ENST00000583899 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.58
EIF4A1-230ENST00000583899 SUPT5HO00267 1087 aaKnown RBP11.39□□□□□ -0.59
EIF4A1-230ENST00000583899 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
EIF4A1-230ENST00000583899 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
EIF4A1-230ENST00000583899 SPDYE1Q8NFV5 336 aaPredicted RBP11.36□□□□□ -0.59
EIF4A1-230ENST00000583899 IFT140Q96RY7 1462 aa11.36□□□□□ -0.59
EIF4A1-230ENST00000583899 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
EIF4A1-230ENST00000583899 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
EIF4A1-230ENST00000583899 CHD1O14646 1710 aa11.32□□□□□ -0.6
EIF4A1-230ENST00000583899 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
EIF4A1-230ENST00000583899 SYNJ1O43426 1573 aa11.31□□□□□ -0.6
EIF4A1-230ENST00000583899 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
EIF4A1-230ENST00000583899 TOP2BQ02880 1626 aa11.27□□□□□ -0.61
EIF4A1-230ENST00000583899 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.61
EIF4A1-230ENST00000583899 AQRO60306 1485 aaKnown RBP eCLIP11.26□□□□□ -0.613e-7■■■■□ 20.7
EIF4A1-230ENST00000583899 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
EIF4A1-230ENST00000583899 SOGA1O94964 1423 aa11.23□□□□□ -0.61
EIF4A1-230ENST00000583899 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
EIF4A1-230ENST00000583899 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
EIF4A1-230ENST00000583899 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
EIF4A1-230ENST00000583899 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.623e-6■■■■□ 21.9
EIF4A1-230ENST00000583899 RIMBP3CA6NJZ7 1639 aa11.18□□□□□ -0.62
EIF4A1-230ENST00000583899 RIMBP3BA6NNM3 1639 aa11.18□□□□□ -0.62
EIF4A1-230ENST00000583899 RIMBP3Q9UFD9 1639 aa11.18□□□□□ -0.62
EIF4A1-230ENST00000583899 PRKAR2AP13861 404 aaKnown RBP11.18□□□□□ -0.62
EIF4A1-230ENST00000583899 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
EIF4A1-230ENST00000583899 CLASP1Q7Z460 1538 aa11.15□□□□□ -0.62
EIF4A1-230ENST00000583899 ADAMTS12P58397 1594 aa11.15□□□□□ -0.62
EIF4A1-230ENST00000583899 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
EIF4A1-230ENST00000583899 GRIN2BQ13224 1484 aa11.13□□□□□ -0.63
EIF4A1-230ENST00000583899 MAGI1Q96QZ7 1491 aaPredicted RBP11.13□□□□□ -0.63
EIF4A1-230ENST00000583899 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
EIF4A1-230ENST00000583899 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
EIF4A1-230ENST00000583899 HAX1O00165 279 aa11.11□□□□□ -0.63
EIF4A1-230ENST00000583899 ARHGEF11O15085 1522 aa11.1□□□□□ -0.63
EIF4A1-230ENST00000583899 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
EIF4A1-230ENST00000583899 EVX2Q03828 476 aa11.08□□□□□ -0.64
EIF4A1-230ENST00000583899 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
EIF4A1-230ENST00000583899 ERICH3Q5RHP9 1530 aa11.07□□□□□ -0.64
EIF4A1-230ENST00000583899 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
EIF4A1-230ENST00000583899 PROM2Q8N271 834 aa11.05□□□□□ -0.64
EIF4A1-230ENST00000583899 C19orf67A6NJJ6 358 aa11.04□□□□□ -0.64
EIF4A1-230ENST00000583899 GRIN2AQ12879 1464 aa11.04□□□□□ -0.64
EIF4A1-230ENST00000583899 ARAP1Q96P48 1450 aa11.03□□□□□ -0.64
EIF4A1-230ENST00000583899 SHROOM2Q13796 1616 aa11.02□□□□□ -0.64
EIF4A1-230ENST00000583899 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
EIF4A1-230ENST00000583899 ERCC6L2Q5T890 1561 aa11.02□□□□□ -0.65
EIF4A1-230ENST00000583899 NUP160Q12769 1436 aa11.01□□□□□ -0.65
EIF4A1-230ENST00000583899 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
EIF4A1-230ENST00000583899 CUL7Q14999 1698 aa10.99□□□□□ -0.65
EIF4A1-230ENST00000583899 FHAD1B1AJZ9 1412 aa10.98□□□□□ -0.65
EIF4A1-230ENST00000583899 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
EIF4A1-230ENST00000583899 CREBZFQ9NS37 354 aa10.96□□□□□ -0.65
EIF4A1-230ENST00000583899 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
EIF4A1-230ENST00000583899 CHMP7Q8WUX9 453 aaPredicted RBP10.95□□□□□ -0.66
EIF4A1-230ENST00000583899 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
EIF4A1-230ENST00000583899 IGF1RP08069 1367 aa10.91□□□□□ -0.66
EIF4A1-230ENST00000583899 CTTNBP2Q8WZ74 1663 aa10.86□□□□□ -0.67
EIF4A1-230ENST00000583899 CYB5RLQ6IPT4 315 aa10.85□□□□□ -0.67
EIF4A1-230ENST00000583899 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
EIF4A1-230ENST00000583899 CD44P16070 742 aaKnown RBP10.83□□□□□ -0.68
EIF4A1-230ENST00000583899 KIAA0586Q9BVV6 1533 aa10.83□□□□□ -0.68
EIF4A1-230ENST00000583899 CARMIL1Q5VZK9 1371 aa10.82□□□□□ -0.68
EIF4A1-230ENST00000583899 IQGAP2Q13576 1575 aa10.82□□□□□ -0.68
EIF4A1-230ENST00000583899 PRG4Q92954 1404 aaPredicted RBP10.81□□□□□ -0.68
EIF4A1-230ENST00000583899 KIF13AQ9H1H9 1805 aa10.81□□□□□ -0.68
EIF4A1-230ENST00000583899 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
EIF4A1-230ENST00000583899 GABBR2O75899 941 aa10.8□□□□□ -0.68
EIF4A1-230ENST00000583899 RAPGEF2Q9Y4G8 1499 aa10.78□□□□□ -0.68
EIF4A1-230ENST00000583899 PRXQ9BXM0 1461 aa10.77□□□□□ -0.69
EIF4A1-230ENST00000583899 DISP1Q96F81 1524 aa10.76□□□□□ -0.69
EIF4A1-230ENST00000583899 UGGT2Q9NYU1 1516 aa10.75□□□□□ -0.69
EIF4A1-230ENST00000583899 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
EIF4A1-230ENST00000583899 KIAA0556O60303 1618 aa10.75□□□□□ -0.69
EIF4A1-230ENST00000583899 FKBP8Q14318 412 aa10.74□□□□□ -0.69
EIF4A1-230ENST00000583899 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
EIF4A1-230ENST00000583899 CLCN6P51797 869 aa10.7□□□□□ -0.7
EIF4A1-230ENST00000583899 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
EIF4A1-230ENST00000583899 KIF21BO75037 1637 aa10.69□□□□□ -0.7
EIF4A1-230ENST00000583899 DIP2BQ9P265 1576 aa10.69□□□□□ -0.7
EIF4A1-230ENST00000583899 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
EIF4A1-230ENST00000583899 ZRANB1Q9UGI0 708 aa10.68□□□□□ -0.7
EIF4A1-230ENST00000583899 SAMD9Q5K651 1589 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms