RNA–Protein interactions for RNA: ENST00000579197.5

PLEKHM1-204, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 2

Gene PLEKHM1, Length 4,995 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-204ENST00000579197 VPS8Q8N3P4 1428 aa17.12■□□□□ 0.33
PLEKHM1-204ENST00000579197 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
PLEKHM1-204ENST00000579197 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
PLEKHM1-204ENST00000579197 HSP90AA1P07900 732 aaKnown RBP17.09■□□□□ 0.33
PLEKHM1-204ENST00000579197 EIF4G2P78344 907 aaKnown RBP eCLIP17.07■□□□□ 0.32
PLEKHM1-204ENST00000579197 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
PLEKHM1-204ENST00000579197 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
PLEKHM1-204ENST00000579197 EIF5BO60841 1220 aaKnown RBP17.01■□□□□ 0.31
PLEKHM1-204ENST00000579197 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
PLEKHM1-204ENST00000579197 TSPY4P0CV99 314 aa17■□□□□ 0.31
PLEKHM1-204ENST00000579197 TSPY10P0CW01 314 aa17■□□□□ 0.31
PLEKHM1-204ENST00000579197 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
PLEKHM1-204ENST00000579197 CUX2O14529 1486 aa17■□□□□ 0.31
PLEKHM1-204ENST00000579197 ESF1Q9H501 851 aaKnown RBP17■□□□□ 0.31
PLEKHM1-204ENST00000579197 RRP7BPQ9NSQ0 103 aa17■□□□□ 0.31
PLEKHM1-204ENST00000579197 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
PLEKHM1-204ENST00000579197 WDR43Q15061 677 aaKnown RBP eCLIP16.99■□□□□ 0.31
PLEKHM1-204ENST00000579197 HIRIP3Q9BW71 556 aaPredicted RBP16.99■□□□□ 0.31
PLEKHM1-204ENST00000579197 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
PLEKHM1-204ENST00000579197 NBR1Q14596 966 aa16.97■□□□□ 0.31
PLEKHM1-204ENST00000579197 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
PLEKHM1-204ENST00000579197 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
PLEKHM1-204ENST00000579197 GLIPR1L2Q4G1C9 344 aa16.93■□□□□ 0.3
PLEKHM1-204ENST00000579197 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
PLEKHM1-204ENST00000579197 ANP32EQ9BTT0 268 aa16.91■□□□□ 0.3
PLEKHM1-204ENST00000579197 TIMELESSQ9UNS1 1208 aa16.91■□□□□ 0.3
PLEKHM1-204ENST00000579197 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
PLEKHM1-204ENST00000579197 KANK4Q5T7N3 995 aaPredicted RBP16.9■□□□□ 0.3
PLEKHM1-204ENST00000579197 SIN3AQ96ST3 1273 aa16.89■□□□□ 0.3
PLEKHM1-204ENST00000579197 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
PLEKHM1-204ENST00000579197 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
PLEKHM1-204ENST00000579197 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
PLEKHM1-204ENST00000579197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
PLEKHM1-204ENST00000579197 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
PLEKHM1-204ENST00000579197 PLEKHD1A6NEE1 506 aa16.84■□□□□ 0.29
PLEKHM1-204ENST00000579197 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.29
PLEKHM1-204ENST00000579197 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
PLEKHM1-204ENST00000579197 BECN1Q14457 450 aa16.82■□□□□ 0.28
PLEKHM1-204ENST00000579197 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
PLEKHM1-204ENST00000579197 SUPT16HQ9Y5B9 1047 aaKnown RBP16.81■□□□□ 0.28
PLEKHM1-204ENST00000579197 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
PLEKHM1-204ENST00000579197 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
PLEKHM1-204ENST00000579197 MYH16Q9H6N6 1097 aa16.78■□□□□ 0.28
PLEKHM1-204ENST00000579197 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
PLEKHM1-204ENST00000579197 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
PLEKHM1-204ENST00000579197 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
PLEKHM1-204ENST00000579197 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
PLEKHM1-204ENST00000579197 FMN1Q68DA7 1419 aa16.73■□□□□ 0.27
PLEKHM1-204ENST00000579197 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
PLEKHM1-204ENST00000579197 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
PLEKHM1-204ENST00000579197 ARXQ96QS3 562 aa16.7■□□□□ 0.26
PLEKHM1-204ENST00000579197 CARD11Q9BXL7 1154 aa16.68■□□□□ 0.26
PLEKHM1-204ENST00000579197 KNSTRNQ9Y448 316 aa16.67■□□□□ 0.26
PLEKHM1-204ENST00000579197 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
PLEKHM1-204ENST00000579197 GOLGA6L22H0YM25 854 aa16.65■□□□□ 0.26
PLEKHM1-204ENST00000579197 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
PLEKHM1-204ENST00000579197 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
PLEKHM1-204ENST00000579197 TRIM44Q96DX7 344 aaPredicted RBP16.63■□□□□ 0.25
PLEKHM1-204ENST00000579197 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
PLEKHM1-204ENST00000579197 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
PLEKHM1-204ENST00000579197 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
PLEKHM1-204ENST00000579197 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
PLEKHM1-204ENST00000579197 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
PLEKHM1-204ENST00000579197 NCLP19338 710 aaKnown RBP16.61■□□□□ 0.25
PLEKHM1-204ENST00000579197 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
PLEKHM1-204ENST00000579197 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
PLEKHM1-204ENST00000579197 FHOD3Q2V2M9 1422 aa16.6■□□□□ 0.25
PLEKHM1-204ENST00000579197 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
PLEKHM1-204ENST00000579197 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
PLEKHM1-204ENST00000579197 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
PLEKHM1-204ENST00000579197 KIF21BO75037 1637 aa16.53■□□□□ 0.24
PLEKHM1-204ENST00000579197 FTSJ3Q8IY81 847 aaKnown RBP16.53■□□□□ 0.24
PLEKHM1-204ENST00000579197 MPHOSPH9Q99550 1183 aa16.53■□□□□ 0.24
PLEKHM1-204ENST00000579197 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.24
PLEKHM1-204ENST00000579197 MS4A1P11836 297 aa16.52■□□□□ 0.24
PLEKHM1-204ENST00000579197 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
PLEKHM1-204ENST00000579197 CASC1Q6TDU7 716 aa16.5■□□□□ 0.23
PLEKHM1-204ENST00000579197 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
PLEKHM1-204ENST00000579197 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
PLEKHM1-204ENST00000579197 IGF1RP08069 1367 aa16.5■□□□□ 0.23
PLEKHM1-204ENST00000579197 NUDCQ9Y266 331 aa16.5■□□□□ 0.23
PLEKHM1-204ENST00000579197 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
PLEKHM1-204ENST00000579197 LAS1LQ9Y4W2 734 aaKnown RBP16.48■□□□□ 0.23
PLEKHM1-204ENST00000579197 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
PLEKHM1-204ENST00000579197 RGS3P49796 1198 aa16.47■□□□□ 0.23
PLEKHM1-204ENST00000579197 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
PLEKHM1-204ENST00000579197 TMF1P82094 1093 aa16.46■□□□□ 0.23
PLEKHM1-204ENST00000579197 PKD2Q13563 968 aa16.46■□□□□ 0.23
PLEKHM1-204ENST00000579197 MAPK8IP3Q9UPT6 1336 aa16.46■□□□□ 0.23
PLEKHM1-204ENST00000579197 CDK11BP21127 795 aaKnown RBP16.46■□□□□ 0.22
PLEKHM1-204ENST00000579197 FOXD1Q16676 465 aa16.46■□□□□ 0.22
PLEKHM1-204ENST00000579197 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
PLEKHM1-204ENST00000579197 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
PLEKHM1-204ENST00000579197 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
PLEKHM1-204ENST00000579197 CCDC18Q5T9S5 1454 aa16.43■□□□□ 0.22
PLEKHM1-204ENST00000579197 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
PLEKHM1-204ENST00000579197 PTMAP06454 111 aaKnown RBP16.43■□□□□ 0.22
PLEKHM1-204ENST00000579197 ANKRD30AQ9BXX3 1397 aa16.42■□□□□ 0.22
PLEKHM1-204ENST00000579197 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
PLEKHM1-204ENST00000579197 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms