RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 PRXQ9BXM0 1461 aa21.08■□□□□ 0.97
CUEDC1-206ENST00000577830 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.96
CUEDC1-206ENST00000577830 IGF1RP08069 1367 aa21.05■□□□□ 0.96
CUEDC1-206ENST00000577830 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
CUEDC1-206ENST00000577830 RAD54L2Q9Y4B4 1467 aa21.04■□□□□ 0.96
CUEDC1-206ENST00000577830 RAB3GAP2Q9H2M9 1393 aa21.04■□□□□ 0.96
CUEDC1-206ENST00000577830 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
CUEDC1-206ENST00000577830 FKBP8Q14318 412 aa21.02■□□□□ 0.96
CUEDC1-206ENST00000577830 CLSPNQ9HAW4 1339 aa21.01■□□□□ 0.95
CUEDC1-206ENST00000577830 ARID3CA6NKF2 412 aa20.94■□□□□ 0.94
CUEDC1-206ENST00000577830 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
CUEDC1-206ENST00000577830 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
CUEDC1-206ENST00000577830 ARHGAP35Q9NRY4 1499 aa20.92■□□□□ 0.94
CUEDC1-206ENST00000577830 NEFLP07196 543 aa20.91■□□□□ 0.94
CUEDC1-206ENST00000577830 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
CUEDC1-206ENST00000577830 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
CUEDC1-206ENST00000577830 RRBP1Q9P2E9 1410 aaKnown RBP20.86■□□□□ 0.93
CUEDC1-206ENST00000577830 ANP32CO43423 234 aa20.85■□□□□ 0.93
CUEDC1-206ENST00000577830 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
CUEDC1-206ENST00000577830 PHLDB1Q86UU1 1377 aa20.84■□□□□ 0.93
CUEDC1-206ENST00000577830 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
CUEDC1-206ENST00000577830 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.93
CUEDC1-206ENST00000577830 IRX6P78412 446 aaPredicted RBP20.82■□□□□ 0.92
CUEDC1-206ENST00000577830 CHIC2Q9UKJ5 165 aa20.82■□□□□ 0.92
CUEDC1-206ENST00000577830 FHOD3Q2V2M9 1422 aa20.77■□□□□ 0.92
CUEDC1-206ENST00000577830 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
CUEDC1-206ENST00000577830 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
CUEDC1-206ENST00000577830 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
CUEDC1-206ENST00000577830 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
CUEDC1-206ENST00000577830 RRP7BPQ9NSQ0 103 aa20.72■□□□□ 0.91
CUEDC1-206ENST00000577830 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
CUEDC1-206ENST00000577830 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
CUEDC1-206ENST00000577830 PPP1R15AO75807 674 aaPredicted RBP20.69■□□□□ 0.9
CUEDC1-206ENST00000577830 HNRNPUQ00839 825 aaKnown RBP eCLIP20.68■□□□□ 0.9
CUEDC1-206ENST00000577830 POLR3GLQ9BT43 218 aa20.67■□□□□ 0.9
CUEDC1-206ENST00000577830 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
CUEDC1-206ENST00000577830 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
CUEDC1-206ENST00000577830 SENP3-EIF4A1A0A087X0R7 540 aa20.66■□□□□ 0.9
CUEDC1-206ENST00000577830 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
CUEDC1-206ENST00000577830 MAPKBP1O60336 1514 aa20.65■□□□□ 0.9
CUEDC1-206ENST00000577830 FOXD1Q16676 465 aa20.61■□□□□ 0.89
CUEDC1-206ENST00000577830 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
CUEDC1-206ENST00000577830 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
CUEDC1-206ENST00000577830 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
CUEDC1-206ENST00000577830 AQRO60306 1485 aaKnown RBP eCLIP20.59■□□□□ 0.89
CUEDC1-206ENST00000577830 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
CUEDC1-206ENST00000577830 FBLN2P98095 1184 aa20.58■□□□□ 0.88
CUEDC1-206ENST00000577830 FAM9BQ8IZU0 186 aa20.55■□□□□ 0.88
CUEDC1-206ENST00000577830 ANP32EQ9BTT0 268 aa20.55■□□□□ 0.88
CUEDC1-206ENST00000577830 RBM19Q9Y4C8 960 aaKnown RBP20.52■□□□□ 0.88
CUEDC1-206ENST00000577830 ZNF326Q5BKZ1 582 aaKnown RBP20.52■□□□□ 0.87
CUEDC1-206ENST00000577830 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
CUEDC1-206ENST00000577830 PCF11O94913 1555 aaKnown RBP20.47■□□□□ 0.87
CUEDC1-206ENST00000577830 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
CUEDC1-206ENST00000577830 CCER2I3L3R5 266 aa20.45■□□□□ 0.86
CUEDC1-206ENST00000577830 ERICH6Q7L0X2 663 aa20.45■□□□□ 0.86
CUEDC1-206ENST00000577830 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
CUEDC1-206ENST00000577830 TIMELESSQ9UNS1 1208 aa20.41■□□□□ 0.86
CUEDC1-206ENST00000577830 CCDC18Q5T9S5 1454 aa20.41■□□□□ 0.86
CUEDC1-206ENST00000577830 FGD6Q6ZV73 1430 aa20.4■□□□□ 0.86
CUEDC1-206ENST00000577830 ZNF608Q9ULD9 1512 aaPredicted RBP20.4■□□□□ 0.86
CUEDC1-206ENST00000577830 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
CUEDC1-206ENST00000577830 PTPRKQ15262 1439 aa20.38■□□□□ 0.85
CUEDC1-206ENST00000577830 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
CUEDC1-206ENST00000577830 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.85
CUEDC1-206ENST00000577830 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
CUEDC1-206ENST00000577830 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
CUEDC1-206ENST00000577830 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
CUEDC1-206ENST00000577830 ZNF777Q9ULD5 760 aaPredicted RBP20.36■□□□□ 0.85
CUEDC1-206ENST00000577830 CUL7Q14999 1698 aa20.35■□□□□ 0.85
CUEDC1-206ENST00000577830 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
CUEDC1-206ENST00000577830 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
CUEDC1-206ENST00000577830 L3MBTL2Q969R5 705 aa20.34■□□□□ 0.85
CUEDC1-206ENST00000577830 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
CUEDC1-206ENST00000577830 B4GALNT3Q6L9W6 998 aa20.32■□□□□ 0.84
CUEDC1-206ENST00000577830 ABCA5Q8WWZ7 1642 aa20.32■□□□□ 0.84
CUEDC1-206ENST00000577830 MPHOSPH9Q99550 1183 aa20.29■□□□□ 0.84
CUEDC1-206ENST00000577830 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
CUEDC1-206ENST00000577830 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
CUEDC1-206ENST00000577830 EFCAB5A4FU69 1503 aa20.27■□□□□ 0.84
CUEDC1-206ENST00000577830 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.83
CUEDC1-206ENST00000577830 MAP3K1Q13233 1512 aa20.27■□□□□ 0.83
CUEDC1-206ENST00000577830 C11orf95C9JLR9 678 aaPredicted RBP20.27■□□□□ 0.83
CUEDC1-206ENST00000577830 UACAQ9BZF9 1416 aa20.26■□□□□ 0.83
CUEDC1-206ENST00000577830 NCOA2Q15596 1464 aa20.26■□□□□ 0.83
CUEDC1-206ENST00000577830 NAIPQ13075 1403 aa20.24■□□□□ 0.83
CUEDC1-206ENST00000577830 CTTNBP2Q8WZ74 1663 aa20.24■□□□□ 0.83
CUEDC1-206ENST00000577830 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
CUEDC1-206ENST00000577830 ZNF644Q9H582 1327 aaPredicted RBP20.24■□□□□ 0.83
CUEDC1-206ENST00000577830 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
CUEDC1-206ENST00000577830 MYOM3Q5VTT5 1437 aa20.21■□□□□ 0.83
CUEDC1-206ENST00000577830 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
CUEDC1-206ENST00000577830 HFM1A2PYH4 1435 aa20.2■□□□□ 0.82
CUEDC1-206ENST00000577830 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
CUEDC1-206ENST00000577830 MSH5O43196 834 aa20.19■□□□□ 0.82
CUEDC1-206ENST00000577830 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
CUEDC1-206ENST00000577830 KDM2AQ9Y2K7 1162 aa20.17■□□□□ 0.82
CUEDC1-206ENST00000577830 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
CUEDC1-206ENST00000577830 PRKRIP1Q9H875 184 aaPredicted RBP20.15■□□□□ 0.82
CUEDC1-206ENST00000577830 CDK13Q14004 1512 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms