RNA–Protein interactions for RNA: ENST00000576625.5

LCMT1-212, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-212ENST00000576625 CEP170Q5SW79 1584 aa16■□□□□ 0.15
LCMT1-212ENST00000576625 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
LCMT1-212ENST00000576625 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
LCMT1-212ENST00000576625 SHROOM2Q13796 1616 aa15.95■□□□□ 0.14
LCMT1-212ENST00000576625 NUP160Q12769 1436 aa15.94■□□□□ 0.14
LCMT1-212ENST00000576625 CUX1P39880 1505 aa15.94■□□□□ 0.14
LCMT1-212ENST00000576625 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
LCMT1-212ENST00000576625 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
LCMT1-212ENST00000576625 KDM6BO15054 1643 aa15.9■□□□□ 0.14
LCMT1-212ENST00000576625 DIP2BQ9P265 1576 aa15.89■□□□□ 0.13
LCMT1-212ENST00000576625 ABCA5Q8WWZ7 1642 aa15.89■□□□□ 0.13
LCMT1-212ENST00000576625 MAPKBP1O60336 1514 aa15.88■□□□□ 0.13
LCMT1-212ENST00000576625 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
LCMT1-212ENST00000576625 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
LCMT1-212ENST00000576625 HECW2Q9P2P5 1572 aa15.84■□□□□ 0.13
LCMT1-212ENST00000576625 NPM3O75607 178 aaKnown RBP15.84■□□□□ 0.13
LCMT1-212ENST00000576625 ADAMTS12P58397 1594 aa15.81■□□□□ 0.12
LCMT1-212ENST00000576625 ADGRL1O94910 1474 aa15.8■□□□□ 0.12
LCMT1-212ENST00000576625 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
LCMT1-212ENST00000576625 FBXO41Q8TF61 875 aa15.77■□□□□ 0.12
LCMT1-212ENST00000576625 ADCY10Q96PN6 1610 aa15.74■□□□□ 0.11
LCMT1-212ENST00000576625 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
LCMT1-212ENST00000576625 TSPOAP1O95153 1857 aa15.72■□□□□ 0.11
LCMT1-212ENST00000576625 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.11
LCMT1-212ENST00000576625 JPH4Q96JJ6 628 aa15.71■□□□□ 0.11
LCMT1-212ENST00000576625 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
LCMT1-212ENST00000576625 PPRC1Q5VV67 1664 aaKnown RBP15.64■□□□□ 0.09
LCMT1-212ENST00000576625 COL17A1Q9UMD9 1497 aaPredicted RBP15.63■□□□□ 0.09
LCMT1-212ENST00000576625 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
LCMT1-212ENST00000576625 RUSC2Q8N2Y8 1516 aa15.61■□□□□ 0.09
LCMT1-212ENST00000576625 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
LCMT1-212ENST00000576625 WRNQ14191 1432 aaPredicted RBP eCLIP15.59■□□□□ 0.09
LCMT1-212ENST00000576625 GLI2P10070 1586 aa15.58■□□□□ 0.08
LCMT1-212ENST00000576625 LMTK3Q96Q04 1460 aa15.56■□□□□ 0.08
LCMT1-212ENST00000576625 PLB1Q6P1J6 1458 aa15.49■□□□□ 0.07
LCMT1-212ENST00000576625 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
LCMT1-212ENST00000576625 TOP2BQ02880 1626 aa15.49■□□□□ 0.07
LCMT1-212ENST00000576625 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
LCMT1-212ENST00000576625 ABCC2Q92887 1545 aa15.48■□□□□ 0.07
LCMT1-212ENST00000576625 SOCS7O14512 581 aa15.46■□□□□ 0.07
LCMT1-212ENST00000576625 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.06
LCMT1-212ENST00000576625 KIAA0586Q9BVV6 1533 aa15.45■□□□□ 0.06
LCMT1-212ENST00000576625 MAP3K4Q9Y6R4 1608 aa15.45■□□□□ 0.06
LCMT1-212ENST00000576625 ILDR2Q71H61 639 aa15.44■□□□□ 0.06
LCMT1-212ENST00000576625 PTPRGP23470 1445 aa15.43■□□□□ 0.06
LCMT1-212ENST00000576625 TEX14Q8IWB6 1497 aa15.41■□□□□ 0.06
LCMT1-212ENST00000576625 EPRSP07814 1512 aaKnown RBP15.41■□□□□ 0.06
LCMT1-212ENST00000576625 UHRF1BP1LA0JNW5 1464 aa15.39■□□□□ 0.05
LCMT1-212ENST00000576625 CUL7Q14999 1698 aa15.36■□□□□ 0.05
LCMT1-212ENST00000576625 TNIKQ9UKE5 1360 aa15.34■□□□□ 0.05
LCMT1-212ENST00000576625 KDM5BQ9UGL1 1544 aa15.33■□□□□ 0.04
LCMT1-212ENST00000576625 PTPRMP28827 1452 aa15.31■□□□□ 0.04
LCMT1-212ENST00000576625 UACAQ9BZF9 1416 aa15.3■□□□□ 0.04
LCMT1-212ENST00000576625 DISP3Q9P2K9 1392 aa15.29■□□□□ 0.04
LCMT1-212ENST00000576625 KIF21BO75037 1637 aa15.28■□□□□ 0.04
LCMT1-212ENST00000576625 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
LCMT1-212ENST00000576625 ADAMTSL3P82987 1691 aa15.28■□□□□ 0.04
LCMT1-212ENST00000576625 MAGI3Q5TCQ9 1506 aa15.26■□□□□ 0.03
LCMT1-212ENST00000576625 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
LCMT1-212ENST00000576625 IGF1RP08069 1367 aa15.25■□□□□ 0.03
LCMT1-212ENST00000576625 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
LCMT1-212ENST00000576625 ZCCHC11Q5TAX3 1644 aaKnown RBP15.24■□□□□ 0.03
LCMT1-212ENST00000576625 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
LCMT1-212ENST00000576625 WDR7Q9Y4E6 1490 aa15.21■□□□□ 0.03
LCMT1-212ENST00000576625 DISP1Q96F81 1524 aa15.2■□□□□ 0.02
LCMT1-212ENST00000576625 CD109Q6YHK3 1445 aa15.18■□□□□ 0.02
LCMT1-212ENST00000576625 CFAP43Q8NDM7 1665 aa15.17■□□□□ 0.02
LCMT1-212ENST00000576625 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
LCMT1-212ENST00000576625 IQGAP2Q13576 1575 aa15.15■□□□□ 0.02
LCMT1-212ENST00000576625 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
LCMT1-212ENST00000576625 SPATA31D1Q6ZQQ2 1576 aa15.14■□□□□ 0.01
LCMT1-212ENST00000576625 BCORL1Q5H9F3 1711 aa15.13■□□□□ 0.01
LCMT1-212ENST00000576625 MADDQ8WXG6 1647 aa15.13■□□□□ 0.01
LCMT1-212ENST00000576625 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
LCMT1-212ENST00000576625 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
LCMT1-212ENST00000576625 HSPA2P54652 639 aa15.1■□□□□ 0.01
LCMT1-212ENST00000576625 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
LCMT1-212ENST00000576625 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
LCMT1-212ENST00000576625 UGGT2Q9NYU1 1516 aa15.08■□□□□ 0.01
LCMT1-212ENST00000576625 KIAA0556O60303 1618 aa15.04■□□□□ -0
LCMT1-212ENST00000576625 KCNH8Q96L42 1107 aa15.03■□□□□ -0
LCMT1-212ENST00000576625 PHLDB1Q86UU1 1377 aa15.02■□□□□ -0
LCMT1-212ENST00000576625 RIMS1Q86UR5 1692 aaKnown RBP15.02□□□□□ -0.01
LCMT1-212ENST00000576625 FRMPD1Q5SYB0 1578 aa15□□□□□ -0.01
LCMT1-212ENST00000576625 ABCA8O94911 1581 aa14.99□□□□□ -0.01
LCMT1-212ENST00000576625 RAPGEF3O95398 923 aa14.99□□□□□ -0.01
LCMT1-212ENST00000576625 ARID4BQ4LE39 1312 aaPredicted RBP14.95□□□□□ -0.02
LCMT1-212ENST00000576625 ARHGEF40Q8TER5 1519 aa14.94□□□□□ -0.02
LCMT1-212ENST00000576625 NEO1Q92859 1461 aa14.94□□□□□ -0.02
LCMT1-212ENST00000576625 ABCA9Q8IUA7 1624 aa14.93□□□□□ -0.02
LCMT1-212ENST00000576625 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
LCMT1-212ENST00000576625 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
LCMT1-212ENST00000576625 YEATS2Q9ULM3 1422 aa14.92□□□□□ -0.02
LCMT1-212ENST00000576625 SLC4A2P04920 1241 aa14.91□□□□□ -0.02
LCMT1-212ENST00000576625 STRCQ7RTU9 1775 aa14.9□□□□□ -0.02
LCMT1-212ENST00000576625 SIGLEC1Q9BZZ2 1709 aa14.88□□□□□ -0.03
LCMT1-212ENST00000576625 TTC37Q6PGP7 1564 aa14.87□□□□□ -0.03
LCMT1-212ENST00000576625 ZBTB22O15209 634 aa14.87□□□□□ -0.03
LCMT1-212ENST00000576625 LTBP4Q8N2S1 1624 aa14.85□□□□□ -0.03
LCMT1-212ENST00000576625 ATP10BO94823 1461 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms