RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
SNX29-208ENST00000569801 SOGA1O94964 1423 aa15.84■□□□□ 0.13
SNX29-208ENST00000569801 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
SNX29-208ENST00000569801 MED1Q15648 1581 aaPredicted RBP15.76■□□□□ 0.11
SNX29-208ENST00000569801 PRG4Q92954 1404 aaPredicted RBP15.76■□□□□ 0.11
SNX29-208ENST00000569801 PPRC1Q5VV67 1664 aaKnown RBP15.75■□□□□ 0.11
SNX29-208ENST00000569801 SHROOM2Q13796 1616 aa15.69■□□□□ 0.1
SNX29-208ENST00000569801 ADCY10Q96PN6 1610 aa15.69■□□□□ 0.1
SNX29-208ENST00000569801 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
SNX29-208ENST00000569801 NUP160Q12769 1436 aa15.68■□□□□ 0.1
SNX29-208ENST00000569801 WIZO95785 1651 aa15.67■□□□□ 0.1
SNX29-208ENST00000569801 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
SNX29-208ENST00000569801 JPH4Q96JJ6 628 aa15.64■□□□□ 0.09
SNX29-208ENST00000569801 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
SNX29-208ENST00000569801 IFFO2Q5TF58 517 aa15.63■□□□□ 0.09
SNX29-208ENST00000569801 UBAP1LF5GYI3 381 aa15.62■□□□□ 0.09
SNX29-208ENST00000569801 ADAMTSL3P82987 1691 aa15.61■□□□□ 0.09
SNX29-208ENST00000569801 TEX14Q8IWB6 1497 aa15.61■□□□□ 0.09
SNX29-208ENST00000569801 GLI2P10070 1586 aa15.61■□□□□ 0.09
SNX29-208ENST00000569801 KIF21BO75037 1637 aa15.61■□□□□ 0.09
SNX29-208ENST00000569801 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
SNX29-208ENST00000569801 HSPA1LP34931 641 aa15.57■□□□□ 0.08
SNX29-208ENST00000569801 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
SNX29-208ENST00000569801 IQSEC2Q5JU85 1478 aa15.56■□□□□ 0.08
SNX29-208ENST00000569801 ASXL2Q76L83 1435 aa15.55■□□□□ 0.08
SNX29-208ENST00000569801 YEATS2Q9ULM3 1422 aa15.54■□□□□ 0.08
SNX29-208ENST00000569801 PLB1Q6P1J6 1458 aa15.52■□□□□ 0.08
SNX29-208ENST00000569801 FGD5Q6ZNL6 1462 aa15.49■□□□□ 0.07
SNX29-208ENST00000569801 SRCAPQ6ZRS2 3230 aa15.49■□□□□ 0.07
SNX29-208ENST00000569801 LTBP4Q8N2S1 1624 aa15.48■□□□□ 0.07
SNX29-208ENST00000569801 RGS17Q9UGC6 210 aaPredicted RBP15.47■□□□□ 0.07
SNX29-208ENST00000569801 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
SNX29-208ENST00000569801 MADDQ8WXG6 1647 aa15.46■□□□□ 0.07
SNX29-208ENST00000569801 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
SNX29-208ENST00000569801 PTPRTO14522 1441 aa15.46■□□□□ 0.07
SNX29-208ENST00000569801 PBRM1Q86U86 1689 aa15.42■□□□□ 0.06
SNX29-208ENST00000569801 MAP3K4Q9Y6R4 1608 aa15.41■□□□□ 0.06
SNX29-208ENST00000569801 EPRSP07814 1512 aaKnown RBP15.41■□□□□ 0.06
SNX29-208ENST00000569801 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
SNX29-208ENST00000569801 KIAA0586Q9BVV6 1533 aa15.38■□□□□ 0.05
SNX29-208ENST00000569801 PIP4K2BP78356 416 aa15.36■□□□□ 0.05
SNX29-208ENST00000569801 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
SNX29-208ENST00000569801 BCORL1Q5H9F3 1711 aa15.34■□□□□ 0.05
SNX29-208ENST00000569801 TTBK1Q5TCY1 1321 aaPredicted RBP15.33■□□□□ 0.04
SNX29-208ENST00000569801 RIMS1Q86UR5 1692 aaKnown RBP15.32■□□□□ 0.04
SNX29-208ENST00000569801 STRCQ7RTU9 1775 aa15.31■□□□□ 0.04
SNX29-208ENST00000569801 POTEAQ6S8J7 498 aa15.31■□□□□ 0.04
SNX29-208ENST00000569801 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
SNX29-208ENST00000569801 UPF1Q92900 1129 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNX29-208ENST00000569801 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
SNX29-208ENST00000569801 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
SNX29-208ENST00000569801 PTPRGP23470 1445 aa15.27■□□□□ 0.04
SNX29-208ENST00000569801 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
SNX29-208ENST00000569801 CD109Q6YHK3 1445 aa15.22■□□□□ 0.03
SNX29-208ENST00000569801 MAGI3Q5TCQ9 1506 aa15.22■□□□□ 0.03
SNX29-208ENST00000569801 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.03
SNX29-208ENST00000569801 CFAP43Q8NDM7 1665 aa15.2■□□□□ 0.02
SNX29-208ENST00000569801 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
SNX29-208ENST00000569801 TOM1O60784 492 aa15.18■□□□□ 0.02
SNX29-208ENST00000569801 RAPGEF3O95398 923 aa15.16■□□□□ 0.02
SNX29-208ENST00000569801 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
SNX29-208ENST00000569801 CUX1P39880 1505 aa15.15■□□□□ 0.02
SNX29-208ENST00000569801 ARAP3Q8WWN8 1544 aa15.15■□□□□ 0.02
SNX29-208ENST00000569801 CEBPAP49715 358 aaPredicted RBP15.12■□□□□ 0.01
SNX29-208ENST00000569801 CUL7Q14999 1698 aa15.11■□□□□ 0.01
SNX29-208ENST00000569801 UHRF1BP1Q6BDS2 1440 aa15.1■□□□□ 0.01
SNX29-208ENST00000569801 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
SNX29-208ENST00000569801 MLECQ14165 292 aa15.09■□□□□ 0.01
SNX29-208ENST00000569801 SETD1AO15047 1707 aaKnown RBP15.09■□□□□ 0.01
SNX29-208ENST00000569801 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0.01
SNX29-208ENST00000569801 PREX1Q8TCU6 1659 aa15.07■□□□□ 0
SNX29-208ENST00000569801 KCNH8Q96L42 1107 aa15.07■□□□□ 0
SNX29-208ENST00000569801 POGZQ7Z3K3 1410 aa15.06■□□□□ 0
SNX29-208ENST00000569801 RBM33Q96EV2 1170 aaKnown RBP15.05■□□□□ -0
SNX29-208ENST00000569801 KDM5BQ9UGL1 1544 aa15.04■□□□□ -0
SNX29-208ENST00000569801 UACAQ9BZF9 1416 aa15.04■□□□□ -0
SNX29-208ENST00000569801 TNIKQ9UKE5 1360 aa15.04■□□□□ -0
SNX29-208ENST00000569801 WDR7Q9Y4E6 1490 aa15.03■□□□□ -0
SNX29-208ENST00000569801 NCOA1Q15788 1441 aa15□□□□□ -0.01
SNX29-208ENST00000569801 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
SNX29-208ENST00000569801 NCKAP5LQ9HCH0 1330 aa14.94□□□□□ -0.02
SNX29-208ENST00000569801 PHLDB1Q86UU1 1377 aa14.94□□□□□ -0.02
SNX29-208ENST00000569801 FANCAO15360 1455 aa14.94□□□□□ -0.02
SNX29-208ENST00000569801 ERICH3Q5RHP9 1530 aa14.91□□□□□ -0.02
SNX29-208ENST00000569801 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
SNX29-208ENST00000569801 ZCCHC11Q5TAX3 1644 aaKnown RBP14.9□□□□□ -0.02
SNX29-208ENST00000569801 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
SNX29-208ENST00000569801 TRIM52Q96A61 297 aa14.89□□□□□ -0.03
SNX29-208ENST00000569801 CARMIL2Q6F5E8 1435 aa14.88□□□□□ -0.03
SNX29-208ENST00000569801 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
SNX29-208ENST00000569801 KIAA0556O60303 1618 aa14.86□□□□□ -0.03
SNX29-208ENST00000569801 PTPRKQ15262 1439 aa14.84□□□□□ -0.03
SNX29-208ENST00000569801 AKNAQ7Z591 1439 aa14.84□□□□□ -0.03
SNX29-208ENST00000569801 FER1L4A9Z1Z3 1794 aa14.83□□□□□ -0.03
SNX29-208ENST00000569801 FRMPD1Q5SYB0 1578 aa14.83□□□□□ -0.04
SNX29-208ENST00000569801 SETBP1Q9Y6X0 1596 aa14.83□□□□□ -0.04
SNX29-208ENST00000569801 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
SNX29-208ENST00000569801 SENP3-EIF4A1A0A087X0R7 540 aa14.8□□□□□ -0.04
SNX29-208ENST00000569801 YY1P25490 414 aa14.8□□□□□ -0.04
SNX29-208ENST00000569801 ALKQ9UM73 1620 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms