RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 KIF21BO75037 1637 aa28.67■■■□□ 2.18
SCRT1-201ENST00000569446 ZNF777Q9ULD5 760 aaPredicted RBP28.65■■■□□ 2.18
SCRT1-201ENST00000569446 MTUS2Q5JR59 1369 aa28.64■■■□□ 2.18
SCRT1-201ENST00000569446 FAM9BQ8IZU0 186 aa28.6■■■□□ 2.17
SCRT1-201ENST00000569446 ARAP1Q96P48 1450 aa28.57■■■□□ 2.16
SCRT1-201ENST00000569446 FOXD1Q16676 465 aa28.55■■■□□ 2.16
SCRT1-201ENST00000569446 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
SCRT1-201ENST00000569446 CLSPNQ9HAW4 1339 aa28.5■■■□□ 2.15
SCRT1-201ENST00000569446 FHOD3Q2V2M9 1422 aa28.48■■■□□ 2.15
SCRT1-201ENST00000569446 MYT1Q01538 1121 aa28.47■■■□□ 2.15
SCRT1-201ENST00000569446 TDRD9Q8NDG6 1382 aaKnown RBP28.46■■■□□ 2.15
SCRT1-201ENST00000569446 SETD5Q9C0A6 1442 aa28.43■■■□□ 2.14
SCRT1-201ENST00000569446 IGF1RP08069 1367 aa28.42■■■□□ 2.14
SCRT1-201ENST00000569446 SALL2Q9Y467 1007 aaPredicted RBP28.38■■■□□ 2.13
SCRT1-201ENST00000569446 PHLDB1Q86UU1 1377 aa28.35■■■□□ 2.13
SCRT1-201ENST00000569446 PPP1R15AO75807 674 aaPredicted RBP28.29■■■□□ 2.12
SCRT1-201ENST00000569446 TSHZ2Q9NRE2 1034 aa28.29■■■□□ 2.12
SCRT1-201ENST00000569446 ARHGAP35Q9NRY4 1499 aa28.29■■■□□ 2.12
SCRT1-201ENST00000569446 CADPSQ9ULU8 1353 aa28.27■■■□□ 2.12
SCRT1-201ENST00000569446 PRXQ9BXM0 1461 aa28.27■■■□□ 2.12
SCRT1-201ENST00000569446 MRS2Q9HD23 443 aa28.27■■■□□ 2.12
SCRT1-201ENST00000569446 KDM2AQ9Y2K7 1162 aa28.26■■■□□ 2.11
SCRT1-201ENST00000569446 CUX1P39880 1505 aa28.25■■■□□ 2.11
SCRT1-201ENST00000569446 RAD54L2Q9Y4B4 1467 aa28.25■■■□□ 2.11
SCRT1-201ENST00000569446 CDK11AQ9UQ88 783 aaPredicted RBP28.22■■■□□ 2.11
SCRT1-201ENST00000569446 SLC4A1APQ9BWU0 796 aaKnown RBP28.21■■■□□ 2.11
SCRT1-201ENST00000569446 EIF4G2P78344 907 aaKnown RBP eCLIP28.19■■■□□ 2.1
SCRT1-201ENST00000569446 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
SCRT1-201ENST00000569446 MYT1LQ9UL68 1186 aa28.17■■■□□ 2.1
SCRT1-201ENST00000569446 DNAJC5BQ9UF47 199 aa28.16■■■□□ 2.1
SCRT1-201ENST00000569446 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
SCRT1-201ENST00000569446 HSPA5P11021 654 aaKnown RBP28.14■■■□□ 2.1
SCRT1-201ENST00000569446 TOP2BQ02880 1626 aa28.14■■■□□ 2.09
SCRT1-201ENST00000569446 PEG3Q9GZU2 1588 aa28.1■■■□□ 2.09
SCRT1-201ENST00000569446 NCAPD3P42695 1498 aa28.07■■■□□ 2.08
SCRT1-201ENST00000569446 RRBP1Q9P2E9 1410 aaKnown RBP28.06■■■□□ 2.08
SCRT1-201ENST00000569446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.03■■■□□ 2.08
SCRT1-201ENST00000569446 B4GALNT3Q6L9W6 998 aa28.02■■■□□ 2.08
SCRT1-201ENST00000569446 CFTRP13569 1480 aa28■■■□□ 2.07
SCRT1-201ENST00000569446 L3MBTL2Q969R5 705 aa28■■■□□ 2.07
SCRT1-201ENST00000569446 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
SCRT1-201ENST00000569446 RBM19Q9Y4C8 960 aaKnown RBP27.99■■■□□ 2.07
SCRT1-201ENST00000569446 NESP48681 1621 aa27.99■■■□□ 2.07
SCRT1-201ENST00000569446 LRRC9Q6ZRR7 1453 aa27.99■■■□□ 2.07
SCRT1-201ENST00000569446 RGL3Q3MIN7 710 aa27.96■■■□□ 2.07
SCRT1-201ENST00000569446 MPHOSPH9Q99550 1183 aa27.95■■■□□ 2.06
SCRT1-201ENST00000569446 CHMP7Q8WUX9 453 aaPredicted RBP27.94■■■□□ 2.06
SCRT1-201ENST00000569446 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
SCRT1-201ENST00000569446 ANP32EQ9BTT0 268 aa27.93■■■□□ 2.06
SCRT1-201ENST00000569446 NPM2Q86SE8 214 aaKnown RBP27.91■■■□□ 2.06
SCRT1-201ENST00000569446 CFDP1Q9UEE9 299 aaPredicted RBP27.91■■■□□ 2.06
SCRT1-201ENST00000569446 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
SCRT1-201ENST00000569446 ZNF644Q9H582 1327 aaPredicted RBP27.9■■■□□ 2.06
SCRT1-201ENST00000569446 TMC1Q8TDI8 760 aa27.89■■■□□ 2.05
SCRT1-201ENST00000569446 CCER2I3L3R5 266 aa27.86■■■□□ 2.05
SCRT1-201ENST00000569446 NBR1Q14596 966 aa27.85■■■□□ 2.05
SCRT1-201ENST00000569446 CCDC184Q52MB2 194 aa27.84■■■□□ 2.05
SCRT1-201ENST00000569446 TIMELESSQ9UNS1 1208 aa27.83■■■□□ 2.05
SCRT1-201ENST00000569446 FMN1Q68DA7 1419 aa27.81■■■□□ 2.04
SCRT1-201ENST00000569446 CCDC18Q5T9S5 1454 aa27.8■■■□□ 2.04
SCRT1-201ENST00000569446 SENP3Q9H4L4 574 aaPredicted RBP27.79■■■□□ 2.04
SCRT1-201ENST00000569446 CCDC136Q96JN2 1154 aa27.78■■■□□ 2.04
SCRT1-201ENST00000569446 FGD6Q6ZV73 1430 aa27.76■■■□□ 2.03
SCRT1-201ENST00000569446 TSPY4P0CV99 314 aa27.73■■■□□ 2.03
SCRT1-201ENST00000569446 TSPY10P0CW01 314 aa27.73■■■□□ 2.03
SCRT1-201ENST00000569446 WASHC2AQ641Q2 1341 aa27.72■■■□□ 2.03
SCRT1-201ENST00000569446 PKD2Q13563 968 aa27.72■■■□□ 2.03
SCRT1-201ENST00000569446 TIAM1Q13009 1591 aa27.71■■■□□ 2.03
SCRT1-201ENST00000569446 CARD11Q9BXL7 1154 aa27.71■■■□□ 2.03
SCRT1-201ENST00000569446 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
SCRT1-201ENST00000569446 DCAF11Q8TEB1 546 aa27.66■■■□□ 2.02
SCRT1-201ENST00000569446 PLEKHD1A6NEE1 506 aa27.63■■■□□ 2.01
SCRT1-201ENST00000569446 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.01
SCRT1-201ENST00000569446 POLA1P09884 1462 aaPredicted RBP27.62■■■□□ 2.01
SCRT1-201ENST00000569446 MAPKBP1O60336 1514 aa27.62■■■□□ 2.01
SCRT1-201ENST00000569446 C11orf95C9JLR9 678 aaPredicted RBP27.62■■■□□ 2.01
SCRT1-201ENST00000569446 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
SCRT1-201ENST00000569446 PRKRIP1Q9H875 184 aaPredicted RBP27.59■■■□□ 2.01
SCRT1-201ENST00000569446 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
SCRT1-201ENST00000569446 NBPF8Q3BBV2 869 aa27.58■■■□□ 2.01
SCRT1-201ENST00000569446 NCOA2Q15596 1464 aa27.57■■■□□ 2
SCRT1-201ENST00000569446 PCF11O94913 1555 aaKnown RBP27.57■■■□□ 2
SCRT1-201ENST00000569446 PPP4R2Q9NY27 417 aa27.57■■■□□ 2
SCRT1-201ENST00000569446 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
SCRT1-201ENST00000569446 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
SCRT1-201ENST00000569446 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
SCRT1-201ENST00000569446 CC2D1BQ5T0F9 858 aaKnown RBP27.55■■■□□ 2
SCRT1-201ENST00000569446 PTPRKQ15262 1439 aa27.54■■■□□ 2
SCRT1-201ENST00000569446 MYOM3Q5VTT5 1437 aa27.52■■■□□ 2
SCRT1-201ENST00000569446 UACAQ9BZF9 1416 aa27.52■■■□□ 2
SCRT1-201ENST00000569446 HNRNPMP52272 730 aaKnown RBP eCLIP27.51■■□□□ 1.99
SCRT1-201ENST00000569446 RTL5Q5HYW3 569 aaPredicted RBP27.51■■□□□ 1.99
SCRT1-201ENST00000569446 TOPBP1Q92547 1522 aa27.51■■□□□ 1.99
SCRT1-201ENST00000569446 ANP32AP39687 249 aaKnown RBP27.47■■□□□ 1.99
SCRT1-201ENST00000569446 CHGAP10645 457 aaKnown RBP27.44■■□□□ 1.98
SCRT1-201ENST00000569446 DAXXQ9UER7 740 aaPredicted RBP27.44■■□□□ 1.98
SCRT1-201ENST00000569446 NAIPQ13075 1403 aa27.44■■□□□ 1.98
SCRT1-201ENST00000569446 KIF7Q2M1P5 1343 aa27.43■■□□□ 1.98
SCRT1-201ENST00000569446 NUP155O75694 1391 aa27.43■■□□□ 1.98
SCRT1-201ENST00000569446 ST20-MTHFSA0A0A6YYL1 179 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms