RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 TAOK2Q9UL54 1235 aa14.06□□□□□ -0.16
HERPUD1-214ENST00000568651 RNF25Q96BH1 459 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-214ENST00000568651 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
HERPUD1-214ENST00000568651 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
HERPUD1-214ENST00000568651 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
HERPUD1-214ENST00000568651 RIOK3O14730 519 aaKnown RBP13.96□□□□□ -0.17
HERPUD1-214ENST00000568651 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-214ENST00000568651 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
HERPUD1-214ENST00000568651 CHRM1P11229 460 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-214ENST00000568651 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
HERPUD1-214ENST00000568651 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-214ENST00000568651 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
HERPUD1-214ENST00000568651 VGFO15240 615 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-214ENST00000568651 SGIP1Q9BQI5 828 aa13.87□□□□□ -0.19
HERPUD1-214ENST00000568651 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-214ENST00000568651 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
HERPUD1-214ENST00000568651 STK25O00506 426 aa13.78□□□□□ -0.2
HERPUD1-214ENST00000568651 RYDENQ9NUL5 291 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-214ENST00000568651 ABCC9O60706 1549 aa13.76□□□□□ -0.21
HERPUD1-214ENST00000568651 GTPBP6O43824 516 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-214ENST00000568651 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
HERPUD1-214ENST00000568651 PRKCSHP14314 528 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-214ENST00000568651 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
HERPUD1-214ENST00000568651 NBR1Q14596 966 aa13.68□□□□□ -0.22
HERPUD1-214ENST00000568651 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-214ENST00000568651 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-214ENST00000568651 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-214ENST00000568651 STK24Q9Y6E0 443 aa13.65□□□□□ -0.22
HERPUD1-214ENST00000568651 PYGBP11216 843 aa13.64□□□□□ -0.23
HERPUD1-214ENST00000568651 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-214ENST00000568651 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-214ENST00000568651 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-214ENST00000568651 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
HERPUD1-214ENST00000568651 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-214ENST00000568651 P3H3Q8IVL6 736 aa13.47□□□□□ -0.25
HERPUD1-214ENST00000568651 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-214ENST00000568651 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
HERPUD1-214ENST00000568651 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-214ENST00000568651 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
HERPUD1-214ENST00000568651 PSEN1P49768 467 aa13.38□□□□□ -0.27
HERPUD1-214ENST00000568651 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-214ENST00000568651 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
HERPUD1-214ENST00000568651 PCDHB13Q9Y5F0 798 aa13.37□□□□□ -0.27
HERPUD1-214ENST00000568651 MFRPQ9BY79 579 aa13.33□□□□□ -0.28
HERPUD1-214ENST00000568651 WDR70Q9NW82 654 aa13.32□□□□□ -0.28
HERPUD1-214ENST00000568651 CADPS2Q86UW7 1296 aa13.28□□□□□ -0.28
HERPUD1-214ENST00000568651 SOX12O15370 315 aa13.27□□□□□ -0.29
HERPUD1-214ENST00000568651 IFNL1Q8IU54 200 aa13.26□□□□□ -0.29
HERPUD1-214ENST00000568651 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
HERPUD1-214ENST00000568651 NLRP6P59044 892 aa13.25□□□□□ -0.29
HERPUD1-214ENST00000568651 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
HERPUD1-214ENST00000568651 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
HERPUD1-214ENST00000568651 MAP3K13O43283 966 aa13.22□□□□□ -0.29
HERPUD1-214ENST00000568651 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
HERPUD1-214ENST00000568651 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
HERPUD1-214ENST00000568651 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
HERPUD1-214ENST00000568651 CABP2Q9NPB3 220 aa13.17□□□□□ -0.3
HERPUD1-214ENST00000568651 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-214ENST00000568651 CCDC180Q9P1Z9 1646 aa13.15□□□□□ -0.3
HERPUD1-214ENST00000568651 PPP1R37O75864 691 aa13.13□□□□□ -0.31
HERPUD1-214ENST00000568651 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-214ENST00000568651 PHF8Q9UPP1 1060 aa13.12□□□□□ -0.31
HERPUD1-214ENST00000568651 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
HERPUD1-214ENST00000568651 E2F4Q16254 413 aa13.1□□□□□ -0.31
HERPUD1-214ENST00000568651 LMOD2Q6P5Q4 547 aa13.1□□□□□ -0.31
HERPUD1-214ENST00000568651 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
HERPUD1-214ENST00000568651 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-214ENST00000568651 MFSD10Q14728 455 aa13.03□□□□□ -0.32
HERPUD1-214ENST00000568651 PDE4AP27815 886 aa13.02□□□□□ -0.33
HERPUD1-214ENST00000568651 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
HERPUD1-214ENST00000568651 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
HERPUD1-214ENST00000568651 PHF12Q96QT6 1004 aa13.01□□□□□ -0.33
HERPUD1-214ENST00000568651 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-214ENST00000568651 NCKAP5LQ9HCH0 1330 aa13.01□□□□□ -0.33
HERPUD1-214ENST00000568651 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-214ENST00000568651 TMEM132AQ24JP5 1023 aa12.99□□□□□ -0.33
HERPUD1-214ENST00000568651 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
HERPUD1-214ENST00000568651 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
HERPUD1-214ENST00000568651 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-214ENST00000568651 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-214ENST00000568651 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-214ENST00000568651 TIE1P35590 1138 aa12.92□□□□□ -0.34
HERPUD1-214ENST00000568651 CAMK2BQ13554 666 aa12.92□□□□□ -0.34
HERPUD1-214ENST00000568651 SMYD5Q6GMV2 418 aa12.92□□□□□ -0.34
HERPUD1-214ENST00000568651 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
HERPUD1-214ENST00000568651 ILDR1Q86SU0 546 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-214ENST00000568651 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
HERPUD1-214ENST00000568651 SEMA3EO15041 775 aa12.91□□□□□ -0.34
HERPUD1-214ENST00000568651 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
HERPUD1-214ENST00000568651 ZC3H15Q8WU90 426 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-214ENST00000568651 GTF3C3Q9Y5Q9 886 aa12.87□□□□□ -0.35
HERPUD1-214ENST00000568651 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
HERPUD1-214ENST00000568651 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
HERPUD1-214ENST00000568651 CLCN6P51797 869 aa12.82□□□□□ -0.36
HERPUD1-214ENST00000568651 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
HERPUD1-214ENST00000568651 RB1CC1Q8TDY2 1594 aa12.79□□□□□ -0.36
HERPUD1-214ENST00000568651 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.36
HERPUD1-214ENST00000568651 ZMYND10O75800 440 aa12.78□□□□□ -0.36
HERPUD1-214ENST00000568651 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-214ENST00000568651 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms