RNA–Protein interactions for RNA: ENST00000567887.5

MACF1-232, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene MACF1, Length 24,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-232ENST00000567887 SENP3Q9H4L4 574 aaPredicted RBP7.92□□□□□ -1.14
MACF1-232ENST00000567887 BECN1Q14457 450 aa7.91□□□□□ -1.14
MACF1-232ENST00000567887 NAP1L2Q9ULW6 460 aaPredicted RBP7.91□□□□□ -1.14
MACF1-232ENST00000567887 PNNQ9H307 717 aaKnown RBP7.9□□□□□ -1.14
MACF1-232ENST00000567887 GOLGA6L6A8MZA4 724 aa7.88□□□□□ -1.15
MACF1-232ENST00000567887 CHGAP10645 457 aaKnown RBP7.88□□□□□ -1.15
MACF1-232ENST00000567887 PATL2C9JE40 543 aaKnown RBP7.88□□□□□ -1.15
MACF1-232ENST00000567887 MYH16Q9H6N6 1097 aa7.88□□□□□ -1.15
MACF1-232ENST00000567887 STAG3Q9UJ98 1225 aa7.87□□□□□ -1.15
MACF1-232ENST00000567887 HNRNPUQ00839 825 aaKnown RBP eCLIP7.86□□□□□ -1.15
MACF1-232ENST00000567887 LAS1LQ9Y4W2 734 aaKnown RBP7.86□□□□□ -1.15
MACF1-232ENST00000567887 SPRYD3Q8NCJ5 442 aa7.86□□□□□ -1.15
MACF1-232ENST00000567887 PTMSP20962 102 aa7.86□□□□□ -1.15
MACF1-232ENST00000567887 KRI1Q8N9T8 703 aaKnown RBP7.86□□□□□ -1.15
MACF1-232ENST00000567887 CHAF1AQ13111 956 aaPredicted RBP7.86□□□□□ -1.15
MACF1-232ENST00000567887 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.86□□□□□ -1.15
MACF1-232ENST00000567887 TAF7LQ5H9L4 462 aa7.86□□□□□ -1.15
MACF1-232ENST00000567887 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
MACF1-232ENST00000567887 TMC1Q8TDI8 760 aa7.86□□□□□ -1.15
MACF1-232ENST00000567887 KIAA2012Q0VF49 1180 aa7.85□□□□□ -1.15
MACF1-232ENST00000567887 A0A0U1RQG5 324 aaPredicted RBP7.84□□□□□ -1.15
MACF1-232ENST00000567887 DDRGK1Q96HY6 314 aa7.84□□□□□ -1.16
MACF1-232ENST00000567887 NPHP1O15259 732 aa7.82□□□□□ -1.16
MACF1-232ENST00000567887 ESF1Q9H501 851 aaKnown RBP7.82□□□□□ -1.16
MACF1-232ENST00000567887 FGD1P98174 961 aa7.82□□□□□ -1.16
MACF1-232ENST00000567887 CREBRFQ8IUR6 639 aa7.82□□□□□ -1.16
MACF1-232ENST00000567887 ARID3CA6NKF2 412 aa7.81□□□□□ -1.16
MACF1-232ENST00000567887 WWC1Q8IX03 1113 aa7.81□□□□□ -1.16
MACF1-232ENST00000567887 CASC1Q6TDU7 716 aa7.81□□□□□ -1.16
MACF1-232ENST00000567887 DDX10Q13206 875 aaKnown RBP7.81□□□□□ -1.16
MACF1-232ENST00000567887 GOLGA6L4A6NEF3 574 aa7.81□□□□□ -1.16
MACF1-232ENST00000567887 APPP05067 770 aa7.81□□□□□ -1.16
MACF1-232ENST00000567887 RRP12Q5JTH9 1297 aaKnown RBP7.81□□□□□ -1.16
MACF1-232ENST00000567887 C14orf37Q86TY3 774 aa7.81□□□□□ -1.16
MACF1-232ENST00000567887 WDR43Q15061 677 aaKnown RBP eCLIP7.8□□□□□ -1.163e-6■■□□□ 14.2
MACF1-232ENST00000567887 GOLGA6L1Q8N7Z2 621 aa7.8□□□□□ -1.16
MACF1-232ENST00000567887 ISY1Q9ULR0 285 aaKnown RBP7.8□□□□□ -1.16
MACF1-232ENST00000567887 NRDCO43847 1150 aa7.8□□□□□ -1.16
MACF1-232ENST00000567887 L1TD1Q5T7N2 865 aaKnown RBP7.79□□□□□ -1.16
MACF1-232ENST00000567887 MSNP26038 577 aaKnown RBP7.77□□□□□ -1.17
MACF1-232ENST00000567887 FBLN2P98095 1184 aa7.77□□□□□ -1.17
MACF1-232ENST00000567887 SETQ01105 290 aaPredicted RBP7.77□□□□□ -1.17
MACF1-232ENST00000567887 ZNF777Q9ULD5 760 aaPredicted RBP7.77□□□□□ -1.17
MACF1-232ENST00000567887 KDM2AQ9Y2K7 1162 aa7.76□□□□□ -1.17
MACF1-232ENST00000567887 KCNJ4P48050 445 aa7.76□□□□□ -1.17
MACF1-232ENST00000567887 GOLGA2Q08379 1002 aa7.76□□□□□ -1.17
MACF1-232ENST00000567887 HSP90AB1P08238 724 aaKnown RBP7.75□□□□□ -1.17
MACF1-232ENST00000567887 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
MACF1-232ENST00000567887 PPM1GO15355 546 aaPredicted RBP7.73□□□□□ -1.17
MACF1-232ENST00000567887 DEKP35659 375 aaKnown RBP7.73□□□□□ -1.17
MACF1-232ENST00000567887 OS9Q13438 667 aaPredicted RBP7.72□□□□□ -1.17
MACF1-232ENST00000567887 GNL2Q13823 731 aaKnown RBP7.72□□□□□ -1.17
MACF1-232ENST00000567887 STK11IPQ8N1F8 1099 aa7.71□□□□□ -1.17
MACF1-232ENST00000567887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.7□□□□□ -1.189e-7■■□□□ 13.3
MACF1-232ENST00000567887 HAP1P54257 671 aaPredicted RBP7.7□□□□□ -1.18
MACF1-232ENST00000567887 CCAR2Q8N163 923 aaKnown RBP7.7□□□□□ -1.18
MACF1-232ENST00000567887 P3H3Q8IVL6 736 aa7.69□□□□□ -1.18
MACF1-232ENST00000567887 PLCD4Q9BRC7 762 aa7.69□□□□□ -1.18
MACF1-232ENST00000567887 VSIG10Q8N0Z9 540 aa7.69□□□□□ -1.18
MACF1-232ENST00000567887 HIRIP3Q9BW71 556 aaPredicted RBP7.68□□□□□ -1.18
MACF1-232ENST00000567887 RGS3P49796 1198 aa7.67□□□□□ -1.18
MACF1-232ENST00000567887 MEX3CQ5U5Q3 659 aaKnown RBP7.67□□□□□ -1.18
MACF1-232ENST00000567887 NEUROD2Q15784 382 aa7.66□□□□□ -1.18
MACF1-232ENST00000567887 HSP90AA2PQ14568 343 aaPredicted RBP7.66□□□□□ -1.18
MACF1-232ENST00000567887 SUPT16HQ9Y5B9 1047 aaKnown RBP7.65□□□□□ -1.18
MACF1-232ENST00000567887 ZNF771Q7L3S4 317 aaPredicted RBP7.65□□□□□ -1.18
MACF1-232ENST00000567887 CEP89Q96ST8 783 aa7.65□□□□□ -1.18
MACF1-232ENST00000567887 LMOD2Q6P5Q4 547 aa7.65□□□□□ -1.18
MACF1-232ENST00000567887 MRS2Q9HD23 443 aa7.65□□□□□ -1.18
MACF1-232ENST00000567887 USP35Q9P2H5 1018 aa7.64□□□□□ -1.19
MACF1-232ENST00000567887 NOP58Q9Y2X3 529 aaKnown RBP7.64□□□□□ -1.19
MACF1-232ENST00000567887 FRAT1Q92837 279 aaPredicted RBP7.64□□□□□ -1.19
MACF1-232ENST00000567887 AK7Q96M32 723 aa7.63□□□□□ -1.19
MACF1-232ENST00000567887 BCL11BQ9C0K0 894 aaPredicted RBP7.63□□□□□ -1.19
MACF1-232ENST00000567887 FTSJ3Q8IY81 847 aaKnown RBP7.63□□□□□ -1.19
MACF1-232ENST00000567887 VPS53Q5VIR6 699 aa7.61□□□□□ -1.19
MACF1-232ENST00000567887 PES1O00541 588 aaKnown RBP7.61□□□□□ -1.19
MACF1-232ENST00000567887 MIER1Q8N108 512 aa7.61□□□□□ -1.19
MACF1-232ENST00000567887 SKIDA1Q1XH10 827 aa7.6□□□□□ -1.19
MACF1-232ENST00000567887 DHX37Q8IY37 1157 aaKnown RBP7.6□□□□□ -1.19
MACF1-232ENST00000567887 TSR1Q2NL82 804 aaKnown RBP7.6□□□□□ -1.19
MACF1-232ENST00000567887 TPM4P67936 248 aa7.59□□□□□ -1.19
MACF1-232ENST00000567887 MAP7D2Q96T17 732 aa7.59□□□□□ -1.19
MACF1-232ENST00000567887 FOXD4L5Q5VV16 416 aaPredicted RBP7.59□□□□□ -1.19
MACF1-232ENST00000567887 CNKSR2Q8WXI2 1034 aa7.59□□□□□ -1.19
MACF1-232ENST00000567887 FOXD4L4Q8WXT5 416 aaPredicted RBP7.59□□□□□ -1.19
MACF1-232ENST00000567887 APBB1O00213 710 aa7.59□□□□□ -1.19
MACF1-232ENST00000567887 HSCBQ8IWL3 235 aa7.59□□□□□ -1.19
MACF1-232ENST00000567887 KIAA1211Q6ZU35 1233 aa7.59□□□□□ -1.19
MACF1-232ENST00000567887 MARCH6O60337 910 aa7.59□□□□□ -1.19
MACF1-232ENST00000567887 ZNF592Q92610 1267 aa7.59□□□□□ -1.2
MACF1-232ENST00000567887 HSP90B1P14625 803 aaKnown RBP7.58□□□□□ -1.2
MACF1-232ENST00000567887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.58□□□□□ -1.21e-6■■■■■ 71.4
MACF1-232ENST00000567887 TPM3P06753 285 aa7.57□□□□□ -1.2
MACF1-232ENST00000567887 FOXD4L1Q9NU39 408 aa7.57□□□□□ -1.2
MACF1-232ENST00000567887 TIMELESSQ9UNS1 1208 aa7.56□□□□□ -1.2
MACF1-232ENST00000567887 HTATSF1O43719 755 aaKnown RBP7.55□□□□□ -1.2
MACF1-232ENST00000567887 MCCP23508 829 aa7.55□□□□□ -1.2
MACF1-232ENST00000567887 RASSF8Q8NHQ8 419 aa7.55□□□□□ -1.2
MACF1-232ENST00000567887 G3V3G9 751 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms