RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 AMER1Q5JTC6 1135 aaPredicted RBP17.77■□□□□ 0.43
UBFD1-207ENST00000567212 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.43
UBFD1-207ENST00000567212 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
UBFD1-207ENST00000567212 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
UBFD1-207ENST00000567212 ARID3AQ99856 593 aa17.67■□□□□ 0.42
UBFD1-207ENST00000567212 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
UBFD1-207ENST00000567212 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
UBFD1-207ENST00000567212 TNNT2P45379 298 aaPredicted RBP17.66■□□□□ 0.42
UBFD1-207ENST00000567212 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
UBFD1-207ENST00000567212 RGS3P49796 1198 aa17.65■□□□□ 0.42
UBFD1-207ENST00000567212 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.42
UBFD1-207ENST00000567212 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
UBFD1-207ENST00000567212 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
UBFD1-207ENST00000567212 BECN1Q14457 450 aa17.62■□□□□ 0.41
UBFD1-207ENST00000567212 CHIC2Q9UKJ5 165 aa17.61■□□□□ 0.41
UBFD1-207ENST00000567212 NCLP19338 710 aaKnown RBP17.6■□□□□ 0.41
UBFD1-207ENST00000567212 DNTTIP2Q5QJE6 756 aaKnown RBP17.58■□□□□ 0.4
UBFD1-207ENST00000567212 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
UBFD1-207ENST00000567212 EIF4G2P78344 907 aaKnown RBP eCLIP17.56■□□□□ 0.4
UBFD1-207ENST00000567212 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
UBFD1-207ENST00000567212 TPRNQ4KMQ1 711 aa17.54■□□□□ 0.4
UBFD1-207ENST00000567212 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
UBFD1-207ENST00000567212 SPRYD3Q8NCJ5 442 aa17.52■□□□□ 0.4
UBFD1-207ENST00000567212 IPO9Q96P70 1041 aaKnown RBP17.52■□□□□ 0.39
UBFD1-207ENST00000567212 GZF1Q9H116 711 aaPredicted RBP17.51■□□□□ 0.39
UBFD1-207ENST00000567212 PTMAP06454 111 aaKnown RBP17.51■□□□□ 0.39
UBFD1-207ENST00000567212 ZBTB7CA1YPR0 619 aa17.5■□□□□ 0.39
UBFD1-207ENST00000567212 CDK11BP21127 795 aaKnown RBP17.49■□□□□ 0.39
UBFD1-207ENST00000567212 KDM2AQ9Y2K7 1162 aa17.49■□□□□ 0.39
UBFD1-207ENST00000567212 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
UBFD1-207ENST00000567212 WDR43Q15061 677 aaKnown RBP eCLIP17.45■□□□□ 0.38
UBFD1-207ENST00000567212 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
UBFD1-207ENST00000567212 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
UBFD1-207ENST00000567212 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
UBFD1-207ENST00000567212 SLKQ9H2G2 1235 aaPredicted RBP17.43■□□□□ 0.38
UBFD1-207ENST00000567212 GOLGA6L22H0YM25 854 aa17.42■□□□□ 0.38
UBFD1-207ENST00000567212 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
UBFD1-207ENST00000567212 PLCB2Q00722 1185 aa17.39■□□□□ 0.37
UBFD1-207ENST00000567212 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
UBFD1-207ENST00000567212 CLIP1P30622 1438 aa17.37■□□□□ 0.37
UBFD1-207ENST00000567212 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
UBFD1-207ENST00000567212 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
UBFD1-207ENST00000567212 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
UBFD1-207ENST00000567212 RSPH6AQ9H0K4 717 aa17.34■□□□□ 0.37
UBFD1-207ENST00000567212 MSNP26038 577 aaKnown RBP17.33■□□□□ 0.36
UBFD1-207ENST00000567212 A0A0U1RQG5 324 aaPredicted RBP17.31■□□□□ 0.36
UBFD1-207ENST00000567212 GSE1Q14687 1217 aa17.31■□□□□ 0.36
UBFD1-207ENST00000567212 PKNOX2Q96KN3 472 aa17.31■□□□□ 0.36
UBFD1-207ENST00000567212 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
UBFD1-207ENST00000567212 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
UBFD1-207ENST00000567212 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.36
UBFD1-207ENST00000567212 BRPF3Q9ULD4 1205 aa17.26■□□□□ 0.35
UBFD1-207ENST00000567212 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
UBFD1-207ENST00000567212 TCERG1O14776 1098 aaKnown RBP17.23■□□□□ 0.35
UBFD1-207ENST00000567212 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
UBFD1-207ENST00000567212 GOLGA6L3A6NEY3 463 aa17.22■□□□□ 0.35
UBFD1-207ENST00000567212 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
UBFD1-207ENST00000567212 USP35Q9P2H5 1018 aa17.21■□□□□ 0.35
UBFD1-207ENST00000567212 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
UBFD1-207ENST00000567212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.345e-12■□□□□ 11.1
UBFD1-207ENST00000567212 PDE4AP27815 886 aa17.16■□□□□ 0.34
UBFD1-207ENST00000567212 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
UBFD1-207ENST00000567212 RGL3Q3MIN7 710 aa17.14■□□□□ 0.33
UBFD1-207ENST00000567212 CC2D1BQ5T0F9 858 aaKnown RBP17.14■□□□□ 0.33
UBFD1-207ENST00000567212 RCAN3Q9UKA8 241 aa17.14■□□□□ 0.33
UBFD1-207ENST00000567212 HSPA5P11021 654 aaKnown RBP17.14■□□□□ 0.33
UBFD1-207ENST00000567212 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
UBFD1-207ENST00000567212 SOGA1O94964 1423 aa17.14■□□□□ 0.33
UBFD1-207ENST00000567212 MSH5O43196 834 aa17.13■□□□□ 0.33
UBFD1-207ENST00000567212 CHGAP10645 457 aaKnown RBP17.13■□□□□ 0.33
UBFD1-207ENST00000567212 FTSJ3Q8IY81 847 aaKnown RBP17.12■□□□□ 0.33
UBFD1-207ENST00000567212 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
UBFD1-207ENST00000567212 PODXL2Q9NZ53 605 aa17.11■□□□□ 0.33
UBFD1-207ENST00000567212 FBLN2P98095 1184 aa17.11■□□□□ 0.33
UBFD1-207ENST00000567212 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
UBFD1-207ENST00000567212 NACADO15069 1562 aa17.08■□□□□ 0.32
UBFD1-207ENST00000567212 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.32
UBFD1-207ENST00000567212 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
UBFD1-207ENST00000567212 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
UBFD1-207ENST00000567212 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
UBFD1-207ENST00000567212 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
UBFD1-207ENST00000567212 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
UBFD1-207ENST00000567212 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
UBFD1-207ENST00000567212 NFKBIBQ15653 356 aa17.04■□□□□ 0.32
UBFD1-207ENST00000567212 EXOC6Q8TAG9 804 aa17.04■□□□□ 0.32
UBFD1-207ENST00000567212 PLIN1O60240 522 aa17.03■□□□□ 0.32
UBFD1-207ENST00000567212 KANK4Q5T7N3 995 aaPredicted RBP17.03■□□□□ 0.32
UBFD1-207ENST00000567212 TNNT3P45378 269 aaPredicted RBP17.02■□□□□ 0.32
UBFD1-207ENST00000567212 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.32
UBFD1-207ENST00000567212 GOLGA3Q08378 1498 aa17.02■□□□□ 0.32
UBFD1-207ENST00000567212 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.31
UBFD1-207ENST00000567212 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
UBFD1-207ENST00000567212 WIZO95785 1651 aa17■□□□□ 0.31
UBFD1-207ENST00000567212 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
UBFD1-207ENST00000567212 CCNB3Q8WWL7 1395 aa16.99■□□□□ 0.31
UBFD1-207ENST00000567212 MFAP1P55081 439 aaKnown RBP16.98■□□□□ 0.31
UBFD1-207ENST00000567212 GBP4Q96PP9 640 aa16.98■□□□□ 0.31
UBFD1-207ENST00000567212 FOXD1Q16676 465 aa16.97■□□□□ 0.31
UBFD1-207ENST00000567212 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
UBFD1-207ENST00000567212 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms