RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 CENPBP07199 599 aaPredicted RBP32.95■■■□□ 2.87
SPSB3-206ENST00000564709 LRRC9Q6ZRR7 1453 aa32.94■■■□□ 2.86
SPSB3-206ENST00000564709 URB2Q14146 1524 aaKnown RBP32.91■■■□□ 2.86
SPSB3-206ENST00000564709 FHAD1B1AJZ9 1412 aa32.91■■■□□ 2.86
SPSB3-206ENST00000564709 CUL7Q14999 1698 aa32.91■■■□□ 2.86
SPSB3-206ENST00000564709 LAMC3Q9Y6N6 1575 aa32.9■■■□□ 2.86
SPSB3-206ENST00000564709 FHOD3Q2V2M9 1422 aa32.9■■■□□ 2.86
SPSB3-206ENST00000564709 CFAP43Q8NDM7 1665 aa32.9■■■□□ 2.86
SPSB3-206ENST00000564709 MIER1Q8N108 512 aa32.88■■■□□ 2.85
SPSB3-206ENST00000564709 ATP1B4Q9UN42 357 aaPredicted RBP32.88■■■□□ 2.85
SPSB3-206ENST00000564709 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
SPSB3-206ENST00000564709 CTTNBP2Q8WZ74 1663 aa32.86■■■□□ 2.85
SPSB3-206ENST00000564709 PHLDB1Q86UU1 1377 aa32.84■■■□□ 2.85
SPSB3-206ENST00000564709 YTHDC1Q96MU7 727 aaKnown RBP32.82■■■□□ 2.84
SPSB3-206ENST00000564709 DNAJC5BQ9UF47 199 aa32.8■■■□□ 2.84
SPSB3-206ENST00000564709 EFCAB5A4FU69 1503 aa32.79■■■□□ 2.84
SPSB3-206ENST00000564709 RAB3GAP2Q9H2M9 1393 aa32.78■■■□□ 2.84
SPSB3-206ENST00000564709 GTF3C3Q9Y5Q9 886 aa32.76■■■□□ 2.83
SPSB3-206ENST00000564709 TDRD9Q8NDG6 1382 aaKnown RBP32.75■■■□□ 2.83
SPSB3-206ENST00000564709 FYCO1Q9BQS8 1478 aa32.73■■■□□ 2.83
SPSB3-206ENST00000564709 FAM50AQ14320 339 aaKnown RBP32.72■■■□□ 2.83
SPSB3-206ENST00000564709 ABCA5Q8WWZ7 1642 aa32.72■■■□□ 2.83
SPSB3-206ENST00000564709 KIF21AQ7Z4S6 1674 aa32.71■■■□□ 2.83
SPSB3-206ENST00000564709 CASKIN1Q8WXD9 1431 aa32.68■■■□□ 2.82
SPSB3-206ENST00000564709 PDS5BQ9NTI5 1447 aa32.66■■■□□ 2.82
SPSB3-206ENST00000564709 GAPVD1Q14C86 1478 aa32.65■■■□□ 2.82
SPSB3-206ENST00000564709 MAPKBP1O60336 1514 aa32.64■■■□□ 2.82
SPSB3-206ENST00000564709 SETD5Q9C0A6 1442 aa32.64■■■□□ 2.82
SPSB3-206ENST00000564709 AQRO60306 1485 aaKnown RBP eCLIP32.62■■■□□ 2.812e-8■■■■■ 44.6
SPSB3-206ENST00000564709 FMN1Q68DA7 1419 aa32.57■■■□□ 2.8
SPSB3-206ENST00000564709 SNAPC4Q5SXM2 1469 aa32.57■■■□□ 2.8
SPSB3-206ENST00000564709 SAMD9Q5K651 1589 aa32.54■■■□□ 2.8
SPSB3-206ENST00000564709 LRRIQ1Q96JM4 1722 aa32.51■■■□□ 2.79
SPSB3-206ENST00000564709 TARBP1Q13395 1621 aaKnown RBP32.49■■■□□ 2.79
SPSB3-206ENST00000564709 MTUS2Q5JR59 1369 aa32.42■■■□□ 2.78
SPSB3-206ENST00000564709 FGD6Q6ZV73 1430 aa32.4■■■□□ 2.78
SPSB3-206ENST00000564709 SIN3AQ96ST3 1273 aa32.39■■■□□ 2.78
SPSB3-206ENST00000564709 PBRM1Q86U86 1689 aa32.38■■■□□ 2.77
SPSB3-206ENST00000564709 GRIN2BQ13224 1484 aa32.37■■■□□ 2.77
SPSB3-206ENST00000564709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.35■■■□□ 2.771e-6■■■■□ 25.8
SPSB3-206ENST00000564709 NCOA2Q15596 1464 aa32.29■■■□□ 2.76
SPSB3-206ENST00000564709 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
SPSB3-206ENST00000564709 SUPT6HQ7KZ85 1726 aaKnown RBP32.25■■■□□ 2.75
SPSB3-206ENST00000564709 PELP1Q8IZL8 1130 aaKnown RBP32.25■■■□□ 2.75
SPSB3-206ENST00000564709 PTPRKQ15262 1439 aa32.24■■■□□ 2.75
SPSB3-206ENST00000564709 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
SPSB3-206ENST00000564709 EHBP1L1Q8N3D4 1523 aa32.22■■■□□ 2.75
SPSB3-206ENST00000564709 MRC2Q9UBG0 1479 aa32.22■■■□□ 2.75
SPSB3-206ENST00000564709 MYOM3Q5VTT5 1437 aa32.21■■■□□ 2.75
SPSB3-206ENST00000564709 MAGI3Q5TCQ9 1506 aa32.2■■■□□ 2.75
SPSB3-206ENST00000564709 CCDC18Q5T9S5 1454 aa32.2■■■□□ 2.74
SPSB3-206ENST00000564709 IQGAP2Q13576 1575 aa32.19■■■□□ 2.74
SPSB3-206ENST00000564709 PTPN23Q9H3S7 1636 aa32.16■■■□□ 2.74
SPSB3-206ENST00000564709 UGGT2Q9NYU1 1516 aa32.14■■■□□ 2.73
SPSB3-206ENST00000564709 HFM1A2PYH4 1435 aa32.13■■■□□ 2.73
SPSB3-206ENST00000564709 HECW1Q76N89 1606 aa32.12■■■□□ 2.73
SPSB3-206ENST00000564709 ZNF608Q9ULD9 1512 aaPredicted RBP32.08■■■□□ 2.73
SPSB3-206ENST00000564709 ARHGEF11O15085 1522 aa32.08■■■□□ 2.73
SPSB3-206ENST00000564709 NAIPQ13075 1403 aa32.06■■■□□ 2.72
SPSB3-206ENST00000564709 ARID3CA6NKF2 412 aa32.05■■■□□ 2.72
SPSB3-206ENST00000564709 CDK13Q14004 1512 aaKnown RBP32.05■■■□□ 2.72
SPSB3-206ENST00000564709 UACAQ9BZF9 1416 aa32.04■■■□□ 2.72
SPSB3-206ENST00000564709 EPRSP07814 1512 aaKnown RBP32.03■■■□□ 2.72
SPSB3-206ENST00000564709 TIMELESSQ9UNS1 1208 aa32.03■■■□□ 2.72
SPSB3-206ENST00000564709 PPP1R15AO75807 674 aaPredicted RBP32■■■□□ 2.71
SPSB3-206ENST00000564709 WDR62O43379 1518 aa31.99■■■□□ 2.71
SPSB3-206ENST00000564709 HIRIP3Q9BW71 556 aaPredicted RBP31.99■■■□□ 2.71
SPSB3-206ENST00000564709 IFT140Q96RY7 1462 aa31.98■■■□□ 2.71
SPSB3-206ENST00000564709 DDX10Q13206 875 aaKnown RBP31.97■■■□□ 2.71
SPSB3-206ENST00000564709 KCNH8Q96L42 1107 aa31.95■■■□□ 2.71
SPSB3-206ENST00000564709 TONSLQ96HA7 1378 aa31.95■■■□□ 2.71
SPSB3-206ENST00000564709 CHIC2Q9UKJ5 165 aa31.95■■■□□ 2.71
SPSB3-206ENST00000564709 RRP7BPQ9NSQ0 103 aa31.93■■■□□ 2.7
SPSB3-206ENST00000564709 TCOF1Q13428 1488 aaKnown RBP31.93■■■□□ 2.7
SPSB3-206ENST00000564709 GCC2Q8IWJ2 1684 aa31.88■■■□□ 2.69
SPSB3-206ENST00000564709 EIF4G3O43432 1585 aaKnown RBP31.87■■■□□ 2.69
SPSB3-206ENST00000564709 KIAA0556O60303 1618 aa31.86■■■□□ 2.69
SPSB3-206ENST00000564709 DISP1Q96F81 1524 aa31.84■■■□□ 2.69
SPSB3-206ENST00000564709 KDM6BO15054 1643 aa31.84■■■□□ 2.69
SPSB3-206ENST00000564709 KIAA0586Q9BVV6 1533 aa31.82■■■□□ 2.68
SPSB3-206ENST00000564709 GRIN2AQ12879 1464 aa31.8■■■□□ 2.68
SPSB3-206ENST00000564709 MIA2Q96PC5 1412 aa31.78■■■□□ 2.68
SPSB3-206ENST00000564709 TRIM52Q96A61 297 aa31.75■■■□□ 2.67
SPSB3-206ENST00000564709 DENND4BO75064 1496 aaPredicted RBP31.74■■■□□ 2.67
SPSB3-206ENST00000564709 ERCC6Q03468 1493 aa31.74■■■□□ 2.67
SPSB3-206ENST00000564709 KDM5BQ9UGL1 1544 aa31.74■■■□□ 2.67
SPSB3-206ENST00000564709 NUP153P49790 1475 aaKnown RBP31.74■■■□□ 2.67
SPSB3-206ENST00000564709 RAPGEF6Q8TEU7 1601 aa31.73■■■□□ 2.67
SPSB3-206ENST00000564709 AKNAQ7Z591 1439 aa31.71■■■□□ 2.67
SPSB3-206ENST00000564709 SUPT16HQ9Y5B9 1047 aaKnown RBP31.64■■■□□ 2.66
SPSB3-206ENST00000564709 CEP170Q5SW79 1584 aa31.63■■■□□ 2.65
SPSB3-206ENST00000564709 ZNF644Q9H582 1327 aaPredicted RBP31.63■■■□□ 2.65
SPSB3-206ENST00000564709 DAPK1P53355 1430 aa31.63■■■□□ 2.65
SPSB3-206ENST00000564709 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
SPSB3-206ENST00000564709 DNMT1P26358 1616 aaKnown RBP31.59■■■□□ 2.65
SPSB3-206ENST00000564709 FOXD1Q16676 465 aa31.59■■■□□ 2.65
SPSB3-206ENST00000564709 CHMP7Q8WUX9 453 aaPredicted RBP31.59■■■□□ 2.65
SPSB3-206ENST00000564709 MPHOSPH9Q99550 1183 aa31.59■■■□□ 2.65
SPSB3-206ENST00000564709 FBLN2P98095 1184 aa31.59■■■□□ 2.65
SPSB3-206ENST00000564709 ANP32CO43423 234 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms