RNA–Protein interactions for RNA: ENST00000564243.5

EIF3C-204, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2 BASIC

Gene EIF3C, Length 2,870 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-204ENST00000564243 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
EIF3C-204ENST00000564243 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
EIF3C-204ENST00000564243 LRRC9Q6ZRR7 1453 aa17.91■□□□□ 0.46
EIF3C-204ENST00000564243 PHLDB1Q86UU1 1377 aa17.9■□□□□ 0.46
EIF3C-204ENST00000564243 ABCA10Q8WWZ4 1543 aa17.89■□□□□ 0.46
EIF3C-204ENST00000564243 MAP3K1Q13233 1512 aa17.89■□□□□ 0.45
EIF3C-204ENST00000564243 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
EIF3C-204ENST00000564243 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
EIF3C-204ENST00000564243 FAM50AQ14320 339 aaKnown RBP17.86■□□□□ 0.45
EIF3C-204ENST00000564243 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
EIF3C-204ENST00000564243 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
EIF3C-204ENST00000564243 PCF11O94913 1555 aaKnown RBP17.84■□□□□ 0.45
EIF3C-204ENST00000564243 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
EIF3C-204ENST00000564243 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
EIF3C-204ENST00000564243 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
EIF3C-204ENST00000564243 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
EIF3C-204ENST00000564243 MAPKBP1O60336 1514 aa17.78■□□□□ 0.44
EIF3C-204ENST00000564243 CFAP43Q8NDM7 1665 aa17.76■□□□□ 0.43
EIF3C-204ENST00000564243 CASKIN1Q8WXD9 1431 aa17.75■□□□□ 0.43
EIF3C-204ENST00000564243 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
EIF3C-204ENST00000564243 CUL7Q14999 1698 aa17.74■□□□□ 0.43
EIF3C-204ENST00000564243 FYCO1Q9BQS8 1478 aa17.73■□□□□ 0.43
EIF3C-204ENST00000564243 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
EIF3C-204ENST00000564243 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
EIF3C-204ENST00000564243 CTTNBP2Q8WZ74 1663 aa17.7■□□□□ 0.42
EIF3C-204ENST00000564243 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.428e-6■■■■□ 23.2
EIF3C-204ENST00000564243 GAPVD1Q14C86 1478 aa17.68■□□□□ 0.42
EIF3C-204ENST00000564243 WDR97A6NE52 1622 aa17.68■□□□□ 0.42
EIF3C-204ENST00000564243 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
EIF3C-204ENST00000564243 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
EIF3C-204ENST00000564243 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
EIF3C-204ENST00000564243 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
EIF3C-204ENST00000564243 MTUS2Q5JR59 1369 aa17.63■□□□□ 0.41
EIF3C-204ENST00000564243 FGD6Q6ZV73 1430 aa17.62■□□□□ 0.41
EIF3C-204ENST00000564243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.6■□□□□ 0.41
EIF3C-204ENST00000564243 KIF21AQ7Z4S6 1674 aa17.59■□□□□ 0.41
EIF3C-204ENST00000564243 PTPRKQ15262 1439 aa17.59■□□□□ 0.41
EIF3C-204ENST00000564243 SAMD9Q5K651 1589 aa17.58■□□□□ 0.41
EIF3C-204ENST00000564243 KCNH8Q96L42 1107 aa17.58■□□□□ 0.4
EIF3C-204ENST00000564243 LRRIQ1Q96JM4 1722 aa17.57■□□□□ 0.4
EIF3C-204ENST00000564243 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
EIF3C-204ENST00000564243 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
EIF3C-204ENST00000564243 NCOA2Q15596 1464 aa17.54■□□□□ 0.4
EIF3C-204ENST00000564243 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
EIF3C-204ENST00000564243 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
EIF3C-204ENST00000564243 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
EIF3C-204ENST00000564243 TIMELESSQ9UNS1 1208 aa17.5■□□□□ 0.39
EIF3C-204ENST00000564243 MYOM3Q5VTT5 1437 aa17.5■□□□□ 0.39
EIF3C-204ENST00000564243 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
EIF3C-204ENST00000564243 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
EIF3C-204ENST00000564243 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
EIF3C-204ENST00000564243 MAGI3Q5TCQ9 1506 aa17.48■□□□□ 0.39
EIF3C-204ENST00000564243 NAIPQ13075 1403 aa17.46■□□□□ 0.39
EIF3C-204ENST00000564243 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.38
EIF3C-204ENST00000564243 PTPN23Q9H3S7 1636 aa17.45■□□□□ 0.38
EIF3C-204ENST00000564243 RRP7BPQ9NSQ0 103 aa17.45■□□□□ 0.38
EIF3C-204ENST00000564243 UACAQ9BZF9 1416 aa17.44■□□□□ 0.38
EIF3C-204ENST00000564243 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
EIF3C-204ENST00000564243 EHBP1L1Q8N3D4 1523 aa17.43■□□□□ 0.38
EIF3C-204ENST00000564243 THOC2Q8NI27 1593 aaKnown RBP17.43■□□□□ 0.38
EIF3C-204ENST00000564243 TONSLQ96HA7 1378 aa17.42■□□□□ 0.38
EIF3C-204ENST00000564243 UGGT2Q9NYU1 1516 aa17.42■□□□□ 0.38
EIF3C-204ENST00000564243 PBRM1Q86U86 1689 aa17.41■□□□□ 0.38
EIF3C-204ENST00000564243 SUPT16HQ9Y5B9 1047 aaKnown RBP17.41■□□□□ 0.38
EIF3C-204ENST00000564243 ARHGEF11O15085 1522 aa17.4■□□□□ 0.38
EIF3C-204ENST00000564243 IQGAP2Q13576 1575 aa17.39■□□□□ 0.38
EIF3C-204ENST00000564243 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
EIF3C-204ENST00000564243 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
EIF3C-204ENST00000564243 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
EIF3C-204ENST00000564243 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
EIF3C-204ENST00000564243 EPRSP07814 1512 aaKnown RBP17.37■□□□□ 0.37
EIF3C-204ENST00000564243 TRIM52Q96A61 297 aa17.34■□□□□ 0.37
EIF3C-204ENST00000564243 HECW1Q76N89 1606 aa17.34■□□□□ 0.37
EIF3C-204ENST00000564243 TCOF1Q13428 1488 aaKnown RBP17.33■□□□□ 0.36
EIF3C-204ENST00000564243 WDR62O43379 1518 aa17.3■□□□□ 0.36
EIF3C-204ENST00000564243 KDM6BO15054 1643 aa17.3■□□□□ 0.36
EIF3C-204ENST00000564243 DENND4BO75064 1496 aaPredicted RBP17.3■□□□□ 0.36
EIF3C-204ENST00000564243 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
EIF3C-204ENST00000564243 ANP32CO43423 234 aa17.28■□□□□ 0.36
EIF3C-204ENST00000564243 FOXD1Q16676 465 aa17.28■□□□□ 0.36
EIF3C-204ENST00000564243 IFT140Q96RY7 1462 aa17.27■□□□□ 0.36
EIF3C-204ENST00000564243 ZNF644Q9H582 1327 aaPredicted RBP17.27■□□□□ 0.35
EIF3C-204ENST00000564243 MPHOSPH9Q99550 1183 aa17.26■□□□□ 0.35
EIF3C-204ENST00000564243 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
EIF3C-204ENST00000564243 DISP1Q96F81 1524 aa17.26■□□□□ 0.35
EIF3C-204ENST00000564243 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
EIF3C-204ENST00000564243 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
EIF3C-204ENST00000564243 GCC2Q8IWJ2 1684 aa17.22■□□□□ 0.35
EIF3C-204ENST00000564243 NUP153P49790 1475 aaKnown RBP17.21■□□□□ 0.35
EIF3C-204ENST00000564243 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
EIF3C-204ENST00000564243 KIAA0556O60303 1618 aa17.21■□□□□ 0.35
EIF3C-204ENST00000564243 AKNAQ7Z591 1439 aa17.21■□□□□ 0.34
EIF3C-204ENST00000564243 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
EIF3C-204ENST00000564243 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
EIF3C-204ENST00000564243 ABCC5O15440 1437 aa17.18■□□□□ 0.34
EIF3C-204ENST00000564243 DAPK1P53355 1430 aa17.18■□□□□ 0.34
EIF3C-204ENST00000564243 BCANQ96GW7 911 aa17.18■□□□□ 0.34
EIF3C-204ENST00000564243 FBLN2P98095 1184 aa17.17■□□□□ 0.34
EIF3C-204ENST00000564243 WASHC2AQ641Q2 1341 aa17.16■□□□□ 0.34
EIF3C-204ENST00000564243 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms