RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 TOP2AP11388 1531 aaKnown RBP13.36□□□□□ -0.27
CNEP1R1-204ENST00000562576 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
CNEP1R1-204ENST00000562576 ABCB7O75027 752 aa13.35□□□□□ -0.27
CNEP1R1-204ENST00000562576 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
CNEP1R1-204ENST00000562576 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
CNEP1R1-204ENST00000562576 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
CNEP1R1-204ENST00000562576 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
CNEP1R1-204ENST00000562576 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
CNEP1R1-204ENST00000562576 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
CNEP1R1-204ENST00000562576 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
CNEP1R1-204ENST00000562576 POTEHQ6S545 545 aa13.29□□□□□ -0.28
CNEP1R1-204ENST00000562576 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
CNEP1R1-204ENST00000562576 KDM4FA0A1W2PPD8 638 aa13.27□□□□□ -0.29
CNEP1R1-204ENST00000562576 ERCC6L2Q5T890 1561 aa13.27□□□□□ -0.29
CNEP1R1-204ENST00000562576 SOGA1O94964 1423 aa13.24□□□□□ -0.29
CNEP1R1-204ENST00000562576 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
CNEP1R1-204ENST00000562576 SYNJ1O43426 1573 aa13.22□□□□□ -0.29
CNEP1R1-204ENST00000562576 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
CNEP1R1-204ENST00000562576 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
CNEP1R1-204ENST00000562576 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
CNEP1R1-204ENST00000562576 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
CNEP1R1-204ENST00000562576 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
CNEP1R1-204ENST00000562576 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
CNEP1R1-204ENST00000562576 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
CNEP1R1-204ENST00000562576 POLA2Q14181 598 aa13.11□□□□□ -0.31
CNEP1R1-204ENST00000562576 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
CNEP1R1-204ENST00000562576 FAM69CQ0P6D2 419 aa13.08□□□□□ -0.32
CNEP1R1-204ENST00000562576 CUX1P39880 1505 aa13.06□□□□□ -0.32
CNEP1R1-204ENST00000562576 CEP170Q5SW79 1584 aa13.05□□□□□ -0.32
CNEP1R1-204ENST00000562576 PBRM1Q86U86 1689 aa13.02□□□□□ -0.33
CNEP1R1-204ENST00000562576 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
CNEP1R1-204ENST00000562576 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
CNEP1R1-204ENST00000562576 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
CNEP1R1-204ENST00000562576 NUP160Q12769 1436 aa12.96□□□□□ -0.34
CNEP1R1-204ENST00000562576 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
CNEP1R1-204ENST00000562576 KDM6BO15054 1643 aa12.94□□□□□ -0.34
CNEP1R1-204ENST00000562576 SHROOM2Q13796 1616 aa12.94□□□□□ -0.34
CNEP1R1-204ENST00000562576 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
CNEP1R1-204ENST00000562576 PRG4Q92954 1404 aaPredicted RBP12.93□□□□□ -0.34
CNEP1R1-204ENST00000562576 TSPOAP1O95153 1857 aa12.91□□□□□ -0.34
CNEP1R1-204ENST00000562576 DIP2BQ9P265 1576 aa12.91□□□□□ -0.34
CNEP1R1-204ENST00000562576 HECW2Q9P2P5 1572 aa12.9□□□□□ -0.34
CNEP1R1-204ENST00000562576 ADGRL1O94910 1474 aa12.9□□□□□ -0.34
CNEP1R1-204ENST00000562576 ABCA10Q8WWZ4 1543 aa12.89□□□□□ -0.35
CNEP1R1-204ENST00000562576 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
CNEP1R1-204ENST00000562576 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
CNEP1R1-204ENST00000562576 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
CNEP1R1-204ENST00000562576 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
CNEP1R1-204ENST00000562576 ADCY10Q96PN6 1610 aa12.85□□□□□ -0.35
CNEP1R1-204ENST00000562576 MAPKBP1O60336 1514 aa12.84□□□□□ -0.35
CNEP1R1-204ENST00000562576 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
CNEP1R1-204ENST00000562576 COL17A1Q9UMD9 1497 aaPredicted RBP12.83□□□□□ -0.36
CNEP1R1-204ENST00000562576 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
CNEP1R1-204ENST00000562576 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
CNEP1R1-204ENST00000562576 FHAD1B1AJZ9 1412 aa12.81□□□□□ -0.36
CNEP1R1-204ENST00000562576 TTBK1Q5TCY1 1321 aaPredicted RBP12.79□□□□□ -0.36
CNEP1R1-204ENST00000562576 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
CNEP1R1-204ENST00000562576 PPRC1Q5VV67 1664 aaKnown RBP12.75□□□□□ -0.37
CNEP1R1-204ENST00000562576 WRNQ14191 1432 aaPredicted RBP eCLIP12.72□□□□□ -0.37
CNEP1R1-204ENST00000562576 ZBTB22O15209 634 aa12.72□□□□□ -0.37
CNEP1R1-204ENST00000562576 ILDR2Q71H61 639 aa12.72□□□□□ -0.37
CNEP1R1-204ENST00000562576 RUSC2Q8N2Y8 1516 aa12.7□□□□□ -0.38
CNEP1R1-204ENST00000562576 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
CNEP1R1-204ENST00000562576 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
CNEP1R1-204ENST00000562576 LMTK3Q96Q04 1460 aa12.66□□□□□ -0.38
CNEP1R1-204ENST00000562576 PTPRGP23470 1445 aa12.63□□□□□ -0.39
CNEP1R1-204ENST00000562576 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
CNEP1R1-204ENST00000562576 GLI2P10070 1586 aa12.6□□□□□ -0.39
CNEP1R1-204ENST00000562576 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
CNEP1R1-204ENST00000562576 ABCC2Q92887 1545 aa12.59□□□□□ -0.39
CNEP1R1-204ENST00000562576 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
CNEP1R1-204ENST00000562576 EPRSP07814 1512 aaKnown RBP12.57□□□□□ -0.4
CNEP1R1-204ENST00000562576 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
CNEP1R1-204ENST00000562576 SOCS7O14512 581 aa12.57□□□□□ -0.4
CNEP1R1-204ENST00000562576 PLB1Q6P1J6 1458 aa12.57□□□□□ -0.4
CNEP1R1-204ENST00000562576 CUL7Q14999 1698 aa12.57□□□□□ -0.4
CNEP1R1-204ENST00000562576 MAP3K4Q9Y6R4 1608 aa12.55□□□□□ -0.4
CNEP1R1-204ENST00000562576 IGF1RP08069 1367 aa12.53□□□□□ -0.4
CNEP1R1-204ENST00000562576 DISP3Q9P2K9 1392 aa12.52□□□□□ -0.41
CNEP1R1-204ENST00000562576 TNIKQ9UKE5 1360 aa12.52□□□□□ -0.41
CNEP1R1-204ENST00000562576 KIF21BO75037 1637 aa12.51□□□□□ -0.41
CNEP1R1-204ENST00000562576 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
CNEP1R1-204ENST00000562576 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
CNEP1R1-204ENST00000562576 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
CNEP1R1-204ENST00000562576 UACAQ9BZF9 1416 aa12.49□□□□□ -0.41
CNEP1R1-204ENST00000562576 HSPA2P54652 639 aa12.49□□□□□ -0.41
CNEP1R1-204ENST00000562576 PTPRMP28827 1452 aa12.48□□□□□ -0.41
CNEP1R1-204ENST00000562576 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
CNEP1R1-204ENST00000562576 UHRF1BP1LA0JNW5 1464 aa12.47□□□□□ -0.41
CNEP1R1-204ENST00000562576 TEX14Q8IWB6 1497 aa12.47□□□□□ -0.41
CNEP1R1-204ENST00000562576 KCNH8Q96L42 1107 aa12.47□□□□□ -0.41
CNEP1R1-204ENST00000562576 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
CNEP1R1-204ENST00000562576 KDM5BQ9UGL1 1544 aa12.46□□□□□ -0.42
CNEP1R1-204ENST00000562576 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
CNEP1R1-204ENST00000562576 CERKQ8TCT0 537 aa12.45□□□□□ -0.42
CNEP1R1-204ENST00000562576 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
CNEP1R1-204ENST00000562576 DISP1Q96F81 1524 aa12.44□□□□□ -0.42
CNEP1R1-204ENST00000562576 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
CNEP1R1-204ENST00000562576 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
CNEP1R1-204ENST00000562576 CARMIL2Q6F5E8 1435 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms