RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
RPUSD1-202ENST00000561734 TOPBP1Q92547 1522 aa29.66■■■□□ 2.34
RPUSD1-202ENST00000561734 FHAD1B1AJZ9 1412 aa29.66■■■□□ 2.34
RPUSD1-202ENST00000561734 POLA1P09884 1462 aaPredicted RBP29.65■■■□□ 2.34
RPUSD1-202ENST00000561734 PCF11O94913 1555 aaKnown RBP29.64■■■□□ 2.33
RPUSD1-202ENST00000561734 NESP48681 1621 aa29.63■■■□□ 2.33
RPUSD1-202ENST00000561734 CFAP43Q8NDM7 1665 aa29.62■■■□□ 2.33
RPUSD1-202ENST00000561734 RAB3GAP2Q9H2M9 1393 aa29.61■■■□□ 2.33
RPUSD1-202ENST00000561734 PHLDB1Q86UU1 1377 aa29.61■■■□□ 2.33
RPUSD1-202ENST00000561734 P3H3Q8IVL6 736 aa29.6■■■□□ 2.33
RPUSD1-202ENST00000561734 FHOD3Q2V2M9 1422 aa29.55■■■□□ 2.32
RPUSD1-202ENST00000561734 CUL7Q14999 1698 aa29.53■■■□□ 2.32
RPUSD1-202ENST00000561734 MAPKBP1O60336 1514 aa29.52■■■□□ 2.32
RPUSD1-202ENST00000561734 EFCAB5A4FU69 1503 aa29.51■■■□□ 2.31
RPUSD1-202ENST00000561734 SETD5Q9C0A6 1442 aa29.5■■■□□ 2.31
RPUSD1-202ENST00000561734 ATP1B4Q9UN42 357 aaPredicted RBP29.48■■■□□ 2.31
RPUSD1-202ENST00000561734 FYCO1Q9BQS8 1478 aa29.48■■■□□ 2.31
RPUSD1-202ENST00000561734 CTTNBP2Q8WZ74 1663 aa29.46■■■□□ 2.31
RPUSD1-202ENST00000561734 FAM50AQ14320 339 aaKnown RBP29.46■■■□□ 2.31
RPUSD1-202ENST00000561734 CASKIN1Q8WXD9 1431 aa29.43■■■□□ 2.3
RPUSD1-202ENST00000561734 URB2Q14146 1524 aaKnown RBP29.42■■■□□ 2.3
RPUSD1-202ENST00000561734 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
RPUSD1-202ENST00000561734 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.3
RPUSD1-202ENST00000561734 LAMC3Q9Y6N6 1575 aa29.4■■■□□ 2.3
RPUSD1-202ENST00000561734 ABCA5Q8WWZ7 1642 aa29.32■■■□□ 2.28
RPUSD1-202ENST00000561734 FMN1Q68DA7 1419 aa29.31■■■□□ 2.28
RPUSD1-202ENST00000561734 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
RPUSD1-202ENST00000561734 TDRD9Q8NDG6 1382 aaKnown RBP29.29■■■□□ 2.28
RPUSD1-202ENST00000561734 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.27■■■□□ 2.28
RPUSD1-202ENST00000561734 SIN3AQ96ST3 1273 aa29.24■■■□□ 2.27
RPUSD1-202ENST00000561734 GAPVD1Q14C86 1478 aa29.24■■■□□ 2.27
RPUSD1-202ENST00000561734 SAMD9Q5K651 1589 aa29.24■■■□□ 2.27
RPUSD1-202ENST00000561734 FGD6Q6ZV73 1430 aa29.21■■■□□ 2.27
RPUSD1-202ENST00000561734 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.26
RPUSD1-202ENST00000561734 MTUS2Q5JR59 1369 aa29.16■■■□□ 2.26
RPUSD1-202ENST00000561734 LRRIQ1Q96JM4 1722 aa29.16■■■□□ 2.26
RPUSD1-202ENST00000561734 DNAJC5BQ9UF47 199 aa29.13■■■□□ 2.25
RPUSD1-202ENST00000561734 KIF21AQ7Z4S6 1674 aa29.13■■■□□ 2.25
RPUSD1-202ENST00000561734 GRIN2BQ13224 1484 aa29.12■■■□□ 2.25
RPUSD1-202ENST00000561734 TIMELESSQ9UNS1 1208 aa29.08■■■□□ 2.25
RPUSD1-202ENST00000561734 THOC2Q8NI27 1593 aaKnown RBP29.07■■■□□ 2.24
RPUSD1-202ENST00000561734 TARBP1Q13395 1621 aaKnown RBP29.06■■■□□ 2.24
RPUSD1-202ENST00000561734 PTPRKQ15262 1439 aa29.06■■■□□ 2.24
RPUSD1-202ENST00000561734 NCOA2Q15596 1464 aa29.06■■■□□ 2.24
RPUSD1-202ENST00000561734 CCDC18Q5T9S5 1454 aa29.04■■■□□ 2.24
RPUSD1-202ENST00000561734 HFM1A2PYH4 1435 aa29.02■■■□□ 2.24
RPUSD1-202ENST00000561734 MYOM3Q5VTT5 1437 aa29.02■■■□□ 2.24
RPUSD1-202ENST00000561734 EHBP1L1Q8N3D4 1523 aa29■■■□□ 2.23
RPUSD1-202ENST00000561734 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
RPUSD1-202ENST00000561734 PTPN23Q9H3S7 1636 aa29■■■□□ 2.23
RPUSD1-202ENST00000561734 PPP1R15AO75807 674 aaPredicted RBP28.98■■■□□ 2.23
RPUSD1-202ENST00000561734 KCNH8Q96L42 1107 aa28.97■■■□□ 2.23
RPUSD1-202ENST00000561734 DDX10Q13206 875 aaKnown RBP28.95■■■□□ 2.23
RPUSD1-202ENST00000561734 UACAQ9BZF9 1416 aa28.95■■■□□ 2.22
RPUSD1-202ENST00000561734 PBRM1Q86U86 1689 aa28.94■■■□□ 2.22
RPUSD1-202ENST00000561734 MAGI3Q5TCQ9 1506 aa28.94■■■□□ 2.22
RPUSD1-202ENST00000561734 NAIPQ13075 1403 aa28.93■■■□□ 2.22
RPUSD1-202ENST00000561734 UGGT2Q9NYU1 1516 aa28.93■■■□□ 2.22
RPUSD1-202ENST00000561734 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
RPUSD1-202ENST00000561734 SUPT16HQ9Y5B9 1047 aaKnown RBP28.88■■■□□ 2.21
RPUSD1-202ENST00000561734 TONSLQ96HA7 1378 aa28.87■■■□□ 2.21
RPUSD1-202ENST00000561734 HIRIP3Q9BW71 556 aaPredicted RBP28.87■■■□□ 2.21
RPUSD1-202ENST00000561734 IQGAP2Q13576 1575 aa28.86■■■□□ 2.21
RPUSD1-202ENST00000561734 ADAMTS12P58397 1594 aa28.85■■■□□ 2.21
RPUSD1-202ENST00000561734 HECW1Q76N89 1606 aa28.85■■■□□ 2.21
RPUSD1-202ENST00000561734 TCOF1Q13428 1488 aaKnown RBP28.79■■■□□ 2.2
RPUSD1-202ENST00000561734 EPRSP07814 1512 aaKnown RBP28.78■■■□□ 2.2
RPUSD1-202ENST00000561734 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
RPUSD1-202ENST00000561734 CDK13Q14004 1512 aaKnown RBP28.74■■■□□ 2.19
RPUSD1-202ENST00000561734 WDR62O43379 1518 aa28.73■■■□□ 2.19
RPUSD1-202ENST00000561734 RRP7BPQ9NSQ0 103 aa28.73■■■□□ 2.19
RPUSD1-202ENST00000561734 GCC2Q8IWJ2 1684 aa28.72■■■□□ 2.19
RPUSD1-202ENST00000561734 CHIC2Q9UKJ5 165 aa28.71■■■□□ 2.19
RPUSD1-202ENST00000561734 KDM5BQ9UGL1 1544 aa28.71■■■□□ 2.19
RPUSD1-202ENST00000561734 ARID3CA6NKF2 412 aa28.65■■■□□ 2.18
RPUSD1-202ENST00000561734 AKNAQ7Z591 1439 aa28.65■■■□□ 2.18
RPUSD1-202ENST00000561734 MIA2Q96PC5 1412 aa28.65■■■□□ 2.18
RPUSD1-202ENST00000561734 KDM6BO15054 1643 aa28.65■■■□□ 2.18
RPUSD1-202ENST00000561734 DENND4BO75064 1496 aaPredicted RBP28.65■■■□□ 2.18
RPUSD1-202ENST00000561734 ANP32CO43423 234 aa28.64■■■□□ 2.18
RPUSD1-202ENST00000561734 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.18
RPUSD1-202ENST00000561734 CCER2I3L3R5 266 aa28.63■■■□□ 2.17
RPUSD1-202ENST00000561734 IFT140Q96RY7 1462 aa28.6■■■□□ 2.17
RPUSD1-202ENST00000561734 TRIM52Q96A61 297 aa28.58■■■□□ 2.17
RPUSD1-202ENST00000561734 KIAA0556O60303 1618 aa28.56■■■□□ 2.16
RPUSD1-202ENST00000561734 DISP1Q96F81 1524 aa28.55■■■□□ 2.16
RPUSD1-202ENST00000561734 KIAA0586Q9BVV6 1533 aa28.54■■■□□ 2.16
RPUSD1-202ENST00000561734 MPHOSPH9Q99550 1183 aa28.5■■■□□ 2.15
RPUSD1-202ENST00000561734 NUP153P49790 1475 aaKnown RBP28.49■■■□□ 2.15
RPUSD1-202ENST00000561734 DAPK1P53355 1430 aa28.48■■■□□ 2.15
RPUSD1-202ENST00000561734 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
RPUSD1-202ENST00000561734 RAPGEF6Q8TEU7 1601 aa28.45■■■□□ 2.15
RPUSD1-202ENST00000561734 EIF4G3O43432 1585 aaKnown RBP28.44■■■□□ 2.14
RPUSD1-202ENST00000561734 ROCK1Q13464 1354 aa28.43■■■□□ 2.14
RPUSD1-202ENST00000561734 DNMT1P26358 1616 aaKnown RBP28.43■■■□□ 2.14
RPUSD1-202ENST00000561734 HSPA5P11021 654 aaKnown RBP28.43■■■□□ 2.14
RPUSD1-202ENST00000561734 ABCC5O15440 1437 aa28.42■■■□□ 2.14
RPUSD1-202ENST00000561734 FOXD1Q16676 465 aa28.42■■■□□ 2.14
RPUSD1-202ENST00000561734 FKBP8Q14318 412 aa28.4■■■□□ 2.14
RPUSD1-202ENST00000561734 ZNF644Q9H582 1327 aaPredicted RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms