RNA–Protein interactions for RNA: ENST00000561080.5

SLC12A6-219, Transcript of solute carrier family 12 member 6, humanhuman

TSL 1 (best)

Gene SLC12A6, Length 5,407 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A6-219ENST00000561080 CARMIL2Q6F5E8 1435 aa24.08■■□□□ 1.44
SLC12A6-219ENST00000561080 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
SLC12A6-219ENST00000561080 EEA1Q15075 1411 aa24.06■■□□□ 1.44
SLC12A6-219ENST00000561080 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
SLC12A6-219ENST00000561080 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
SLC12A6-219ENST00000561080 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
SLC12A6-219ENST00000561080 CLIP1P30622 1438 aa24.02■■□□□ 1.44
SLC12A6-219ENST00000561080 ARXQ96QS3 562 aa24.01■■□□□ 1.43
SLC12A6-219ENST00000561080 RRP7BPQ9NSQ0 103 aa24.01■■□□□ 1.43
SLC12A6-219ENST00000561080 GGT6Q6P531 493 aa24■■□□□ 1.43
SLC12A6-219ENST00000561080 POGKQ9P215 609 aa24■■□□□ 1.43
SLC12A6-219ENST00000561080 NPHP1O15259 732 aa23.98■■□□□ 1.43
SLC12A6-219ENST00000561080 RGL3Q3MIN7 710 aa23.97■■□□□ 1.43
SLC12A6-219ENST00000561080 TMC1Q8TDI8 760 aa23.96■■□□□ 1.43
SLC12A6-219ENST00000561080 CUX2O14529 1486 aa23.94■■□□□ 1.42
SLC12A6-219ENST00000561080 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
SLC12A6-219ENST00000561080 KANK1Q14678 1352 aa23.93■■□□□ 1.42
SLC12A6-219ENST00000561080 SOGA1O94964 1423 aa23.92■■□□□ 1.42
SLC12A6-219ENST00000561080 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
SLC12A6-219ENST00000561080 DIEXFQ68CQ4 756 aaKnown RBP23.88■■□□□ 1.41
SLC12A6-219ENST00000561080 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
SLC12A6-219ENST00000561080 GOLGA3Q08378 1498 aa23.86■■□□□ 1.41
SLC12A6-219ENST00000561080 CCDC9Q9Y3X0 531 aaKnown RBP23.85■■□□□ 1.41
SLC12A6-219ENST00000561080 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
SLC12A6-219ENST00000561080 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
SLC12A6-219ENST00000561080 CCNB3Q8WWL7 1395 aa23.84■■□□□ 1.41
SLC12A6-219ENST00000561080 EFCAB2Q5VUJ9 269 aa23.84■■□□□ 1.41
SLC12A6-219ENST00000561080 EID1Q9Y6B2 187 aa23.79■■□□□ 1.4
SLC12A6-219ENST00000561080 PPM1GO15355 546 aaPredicted RBP23.74■■□□□ 1.39
SLC12A6-219ENST00000561080 FAM69CQ0P6D2 419 aa23.73■■□□□ 1.39
SLC12A6-219ENST00000561080 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
SLC12A6-219ENST00000561080 WDR43Q15061 677 aaKnown RBP eCLIP23.71■■□□□ 1.39
SLC12A6-219ENST00000561080 CDCA8Q53HL2 280 aa23.71■■□□□ 1.39
SLC12A6-219ENST00000561080 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
SLC12A6-219ENST00000561080 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
SLC12A6-219ENST00000561080 MEX3CQ5U5Q3 659 aaKnown RBP23.6■■□□□ 1.37
SLC12A6-219ENST00000561080 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
SLC12A6-219ENST00000561080 PAK3O75914 559 aaPredicted RBP23.58■■□□□ 1.37
SLC12A6-219ENST00000561080 CSB-PGBD3P0DP91 1061 aa23.58■■□□□ 1.37
SLC12A6-219ENST00000561080 CFAP53Q96M91 514 aa23.58■■□□□ 1.36
SLC12A6-219ENST00000561080 SOX12O15370 315 aa23.56■■□□□ 1.36
SLC12A6-219ENST00000561080 KIF3BO15066 747 aa23.53■■□□□ 1.36
SLC12A6-219ENST00000561080 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
SLC12A6-219ENST00000561080 WASHC2CQ9Y4E1 1318 aa23.52■■□□□ 1.35
SLC12A6-219ENST00000561080 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
SLC12A6-219ENST00000561080 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
SLC12A6-219ENST00000561080 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
SLC12A6-219ENST00000561080 STK26Q9P289 416 aa23.51■■□□□ 1.35
SLC12A6-219ENST00000561080 EIF4G2P78344 907 aaKnown RBP eCLIP23.5■■□□□ 1.35
SLC12A6-219ENST00000561080 SALL2Q9Y467 1007 aaPredicted RBP23.5■■□□□ 1.35
SLC12A6-219ENST00000561080 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
SLC12A6-219ENST00000561080 SRPK2P78362 688 aaKnown RBP23.5■■□□□ 1.35
SLC12A6-219ENST00000561080 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.35
SLC12A6-219ENST00000561080 DCAF8L1A6NGE4 600 aa23.49■■□□□ 1.35
SLC12A6-219ENST00000561080 SPAG9O60271 1321 aaKnown RBP23.47■■□□□ 1.35
SLC12A6-219ENST00000561080 PTPRGP23470 1445 aa23.47■■□□□ 1.35
SLC12A6-219ENST00000561080 TNIKQ9UKE5 1360 aa23.47■■□□□ 1.35
SLC12A6-219ENST00000561080 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
SLC12A6-219ENST00000561080 KNSTRNQ9Y448 316 aa23.44■■□□□ 1.34
SLC12A6-219ENST00000561080 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
SLC12A6-219ENST00000561080 FAM9BQ8IZU0 186 aa23.41■■□□□ 1.34
SLC12A6-219ENST00000561080 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.41■■□□□ 1.34
SLC12A6-219ENST00000561080 TMX4Q9H1E5 349 aaPredicted RBP23.39■■□□□ 1.33
SLC12A6-219ENST00000561080 NUDCQ9Y266 331 aa23.39■■□□□ 1.33
SLC12A6-219ENST00000561080 DDX10Q13206 875 aaKnown RBP23.38■■□□□ 1.33
SLC12A6-219ENST00000561080 MYH16Q9H6N6 1097 aa23.37■■□□□ 1.33
SLC12A6-219ENST00000561080 RSPH4AQ5TD94 716 aa23.36■■□□□ 1.33
SLC12A6-219ENST00000561080 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
SLC12A6-219ENST00000561080 MAPK8IP3Q9UPT6 1336 aa23.31■■□□□ 1.32
SLC12A6-219ENST00000561080 HNRNPMP52272 730 aaKnown RBP eCLIP23.29■■□□□ 1.32
SLC12A6-219ENST00000561080 NGDNQ8NEJ9 315 aaKnown RBP23.29■■□□□ 1.32
SLC12A6-219ENST00000561080 RTL5Q5HYW3 569 aaPredicted RBP23.28■■□□□ 1.32
SLC12A6-219ENST00000561080 TOP2AP11388 1531 aaKnown RBP23.27■■□□□ 1.32
SLC12A6-219ENST00000561080 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
SLC12A6-219ENST00000561080 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
SLC12A6-219ENST00000561080 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
SLC12A6-219ENST00000561080 HDGFL2Q7Z4V5 671 aaPredicted RBP23.26■■□□□ 1.31
SLC12A6-219ENST00000561080 DCAF11Q8TEB1 546 aa23.26■■□□□ 1.31
SLC12A6-219ENST00000561080 HNRNPUQ00839 825 aaKnown RBP eCLIP23.25■■□□□ 1.31
SLC12A6-219ENST00000561080 LAS1LQ9Y4W2 734 aaKnown RBP23.24■■□□□ 1.31
SLC12A6-219ENST00000561080 FOXD1Q16676 465 aa23.23■■□□□ 1.31
SLC12A6-219ENST00000561080 EVA1CP58658 441 aa23.22■■□□□ 1.31
SLC12A6-219ENST00000561080 ANKRD30AQ9BXX3 1397 aa23.21■■□□□ 1.31
SLC12A6-219ENST00000561080 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.31
SLC12A6-219ENST00000561080 ZNF330Q9Y3S2 320 aaPredicted RBP23.2■■□□□ 1.3
SLC12A6-219ENST00000561080 U2SURPO15042 1029 aaKnown RBP23.2■■□□□ 1.3
SLC12A6-219ENST00000561080 MSH5O43196 834 aa23.2■■□□□ 1.3
SLC12A6-219ENST00000561080 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
SLC12A6-219ENST00000561080 RAPGEF2Q9Y4G8 1499 aa23.19■■□□□ 1.3
SLC12A6-219ENST00000561080 TMF1P82094 1093 aa23.18■■□□□ 1.3
SLC12A6-219ENST00000561080 UPF2Q9HAU5 1272 aaKnown RBP23.18■■□□□ 1.3
SLC12A6-219ENST00000561080 HSP90AA1P07900 732 aaKnown RBP23.17■■□□□ 1.3
SLC12A6-219ENST00000561080 NUTM2FA1L443 756 aa23.16■■□□□ 1.3
SLC12A6-219ENST00000561080 DNAJC5BQ9UF47 199 aa23.16■■□□□ 1.3
SLC12A6-219ENST00000561080 ATF3P18847 181 aa23.14■■□□□ 1.3
SLC12A6-219ENST00000561080 PKD2Q13563 968 aa23.14■■□□□ 1.3
SLC12A6-219ENST00000561080 ARHGAP35Q9NRY4 1499 aa23.14■■□□□ 1.29
SLC12A6-219ENST00000561080 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
SLC12A6-219ENST00000561080 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
SLC12A6-219ENST00000561080 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms