RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
MARK3-220ENST00000560417 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
MARK3-220ENST00000560417 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
MARK3-220ENST00000560417 HS6ST3Q8IZP7 471 aa13.58□□□□□ -0.24
MARK3-220ENST00000560417 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
MARK3-220ENST00000560417 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
MARK3-220ENST00000560417 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
MARK3-220ENST00000560417 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
MARK3-220ENST00000560417 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
MARK3-220ENST00000560417 CFAP44Q96MT7 982 aa13.51□□□□□ -0.25
MARK3-220ENST00000560417 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
MARK3-220ENST00000560417 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
MARK3-220ENST00000560417 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
MARK3-220ENST00000560417 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
MARK3-220ENST00000560417 PYGBP11216 843 aa13.48□□□□□ -0.25
MARK3-220ENST00000560417 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
MARK3-220ENST00000560417 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
MARK3-220ENST00000560417 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
MARK3-220ENST00000560417 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
MARK3-220ENST00000560417 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
MARK3-220ENST00000560417 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
MARK3-220ENST00000560417 STK25O00506 426 aa13.38□□□□□ -0.27
MARK3-220ENST00000560417 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
MARK3-220ENST00000560417 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
MARK3-220ENST00000560417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
MARK3-220ENST00000560417 ZFP91Q96JP5 570 aaPredicted RBP13.37□□□□□ -0.27
MARK3-220ENST00000560417 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
MARK3-220ENST00000560417 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
MARK3-220ENST00000560417 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
MARK3-220ENST00000560417 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
MARK3-220ENST00000560417 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
MARK3-220ENST00000560417 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
MARK3-220ENST00000560417 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
MARK3-220ENST00000560417 PCDHB13Q9Y5F0 798 aa13.24□□□□□ -0.29
MARK3-220ENST00000560417 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
MARK3-220ENST00000560417 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
MARK3-220ENST00000560417 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
MARK3-220ENST00000560417 BCANQ96GW7 911 aa13.19□□□□□ -0.3
MARK3-220ENST00000560417 RYDENQ9NUL5 291 aaKnown RBP13.18□□□□□ -0.3
MARK3-220ENST00000560417 MAP3K13O43283 966 aa13.17□□□□□ -0.3
MARK3-220ENST00000560417 IFNL1Q8IU54 200 aa13.17□□□□□ -0.3
MARK3-220ENST00000560417 PSEN1P49768 467 aa13.16□□□□□ -0.3
MARK3-220ENST00000560417 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
MARK3-220ENST00000560417 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
MARK3-220ENST00000560417 PHF12Q96QT6 1004 aa13.06□□□□□ -0.32
MARK3-220ENST00000560417 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
MARK3-220ENST00000560417 MFRPQ9BY79 579 aa13.05□□□□□ -0.32
MARK3-220ENST00000560417 EFCAB3Q8N7B9 438 aa12.99□□□□□ -0.33
MARK3-220ENST00000560417 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
MARK3-220ENST00000560417 SOX12O15370 315 aa12.97□□□□□ -0.33
MARK3-220ENST00000560417 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
MARK3-220ENST00000560417 CADPS2Q86UW7 1296 aa12.93□□□□□ -0.34
MARK3-220ENST00000560417 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
MARK3-220ENST00000560417 NLRP6P59044 892 aa12.92□□□□□ -0.34
MARK3-220ENST00000560417 PHF8Q9UPP1 1060 aa12.92□□□□□ -0.34
MARK3-220ENST00000560417 TRPC6Q9Y210 931 aa12.92□□□□□ -0.34
MARK3-220ENST00000560417 PPP1R37O75864 691 aa12.9□□□□□ -0.34
MARK3-220ENST00000560417 TMEM106CQ9BVX2 250 aa12.87□□□□□ -0.35
MARK3-220ENST00000560417 TIE1P35590 1138 aa12.84□□□□□ -0.35
MARK3-220ENST00000560417 MS4A4AQ96JQ5 239 aa12.84□□□□□ -0.35
MARK3-220ENST00000560417 NBR1Q14596 966 aa12.83□□□□□ -0.36
MARK3-220ENST00000560417 PRKCSHP14314 528 aaPredicted RBP12.81□□□□□ -0.36
MARK3-220ENST00000560417 TTLL13PA6NNM8 815 aa12.8□□□□□ -0.36
MARK3-220ENST00000560417 EVX2Q03828 476 aa12.79□□□□□ -0.36
MARK3-220ENST00000560417 GALR2O43603 387 aaPredicted RBP12.78□□□□□ -0.36
MARK3-220ENST00000560417 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
MARK3-220ENST00000560417 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
MARK3-220ENST00000560417 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
MARK3-220ENST00000560417 CLCN6P51797 869 aa12.77□□□□□ -0.37
MARK3-220ENST00000560417 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
MARK3-220ENST00000560417 HAX1O00165 279 aa12.76□□□□□ -0.37
MARK3-220ENST00000560417 MKRN3Q13064 507 aaKnown RBP12.75□□□□□ -0.37
MARK3-220ENST00000560417 WDR70Q9NW82 654 aa12.75□□□□□ -0.37
MARK3-220ENST00000560417 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
MARK3-220ENST00000560417 KCNV2Q8TDN2 545 aa12.73□□□□□ -0.37
MARK3-220ENST00000560417 NCKAP5LQ9HCH0 1330 aa12.7□□□□□ -0.38
MARK3-220ENST00000560417 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
MARK3-220ENST00000560417 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
MARK3-220ENST00000560417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.385e-7■■□□□ 14.4
MARK3-220ENST00000560417 MFSD10Q14728 455 aa12.64□□□□□ -0.39
MARK3-220ENST00000560417 PDE4AP27815 886 aa12.63□□□□□ -0.39
MARK3-220ENST00000560417 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
MARK3-220ENST00000560417 E2F4Q16254 413 aa12.62□□□□□ -0.39
MARK3-220ENST00000560417 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
MARK3-220ENST00000560417 ATMINO43313 823 aaPredicted RBP12.61□□□□□ -0.39
MARK3-220ENST00000560417 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
MARK3-220ENST00000560417 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
MARK3-220ENST00000560417 PDCD7Q8N8D1 485 aaKnown RBP12.58□□□□□ -0.4
MARK3-220ENST00000560417 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
MARK3-220ENST00000560417 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
MARK3-220ENST00000560417 IER5LQ5T953 404 aa12.55□□□□□ -0.4
MARK3-220ENST00000560417 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
MARK3-220ENST00000560417 GABBR2O75899 941 aa12.54□□□□□ -0.4
MARK3-220ENST00000560417 CAMK2BQ13554 666 aa12.53□□□□□ -0.4
MARK3-220ENST00000560417 ARIH1Q9Y4X5 557 aaPredicted RBP12.53□□□□□ -0.4
MARK3-220ENST00000560417 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
MARK3-220ENST00000560417 OCEL1Q9H607 264 aa12.51□□□□□ -0.41
MARK3-220ENST00000560417 GPHNQ9NQX3 736 aaPredicted RBP12.51□□□□□ -0.41
MARK3-220ENST00000560417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
MARK3-220ENST00000560417 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms