RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
ZEB1-217ENST00000559858 PAK3O75914 559 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-217ENST00000559858 MAPKBP1O60336 1514 aa9.17□□□□□ -0.94
ZEB1-217ENST00000559858 CCNB3Q8WWL7 1395 aa9.17□□□□□ -0.94
ZEB1-217ENST00000559858 HNRNPUQ00839 825 aaKnown RBP eCLIP9.17□□□□□ -0.94
ZEB1-217ENST00000559858 KANK4Q5T7N3 995 aaPredicted RBP9.17□□□□□ -0.94
ZEB1-217ENST00000559858 CCDC136Q96JN2 1154 aa9.17□□□□□ -0.94
ZEB1-217ENST00000559858 RAB3GAP2Q9H2M9 1393 aa9.15□□□□□ -0.94
ZEB1-217ENST00000559858 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.94
ZEB1-217ENST00000559858 IL27Q8NEV9 243 aa9.15□□□□□ -0.95
ZEB1-217ENST00000559858 RANGAP1P46060 587 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-217ENST00000559858 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
ZEB1-217ENST00000559858 IPO9Q96P70 1041 aaKnown RBP9.13□□□□□ -0.95
ZEB1-217ENST00000559858 ZBTB47Q9UFB7 747 aaPredicted RBP9.12□□□□□ -0.95
ZEB1-217ENST00000559858 B4GALNT3Q6L9W6 998 aa9.11□□□□□ -0.95
ZEB1-217ENST00000559858 SIN3AQ96ST3 1273 aa9.11□□□□□ -0.95
ZEB1-217ENST00000559858 HIRIP3Q9BW71 556 aaPredicted RBP9.11□□□□□ -0.95
ZEB1-217ENST00000559858 SETD5Q9C0A6 1442 aa9.11□□□□□ -0.95
ZEB1-217ENST00000559858 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
ZEB1-217ENST00000559858 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.11□□□□□ -0.95
ZEB1-217ENST00000559858 ARAP1Q96P48 1450 aa9.1□□□□□ -0.95
ZEB1-217ENST00000559858 WASHC2AQ641Q2 1341 aa9.1□□□□□ -0.95
ZEB1-217ENST00000559858 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
ZEB1-217ENST00000559858 SYNJ1O43426 1573 aa9.08□□□□□ -0.96
ZEB1-217ENST00000559858 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
ZEB1-217ENST00000559858 USP35Q9P2H5 1018 aa9.07□□□□□ -0.96
ZEB1-217ENST00000559858 WASHC2CQ9Y4E1 1318 aa9.05□□□□□ -0.96
ZEB1-217ENST00000559858 ERICH3Q5RHP9 1530 aa9.04□□□□□ -0.96
ZEB1-217ENST00000559858 ZBED9Q6R2W3 1325 aa9.02□□□□□ -0.97
ZEB1-217ENST00000559858 NEFMP07197 916 aa9.01□□□□□ -0.97
ZEB1-217ENST00000559858 PRXQ9BXM0 1461 aa9.01□□□□□ -0.97
ZEB1-217ENST00000559858 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
ZEB1-217ENST00000559858 PPM1GO15355 546 aaPredicted RBP9.01□□□□□ -0.97
ZEB1-217ENST00000559858 EIF5BO60841 1220 aaKnown RBP9□□□□□ -0.97
ZEB1-217ENST00000559858 FHAD1B1AJZ9 1412 aa8.98□□□□□ -0.97
ZEB1-217ENST00000559858 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
ZEB1-217ENST00000559858 MAP3K1Q13233 1512 aa8.97□□□□□ -0.97
ZEB1-217ENST00000559858 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.97
ZEB1-217ENST00000559858 FAM50AQ14320 339 aaKnown RBP8.96□□□□□ -0.98
ZEB1-217ENST00000559858 FAM9BQ8IZU0 186 aa8.96□□□□□ -0.98
ZEB1-217ENST00000559858 BRPF3Q9ULD4 1205 aa8.96□□□□□ -0.98
ZEB1-217ENST00000559858 LAS1LQ9Y4W2 734 aaKnown RBP8.96□□□□□ -0.98
ZEB1-217ENST00000559858 CCDC184Q52MB2 194 aa8.96□□□□□ -0.98
ZEB1-217ENST00000559858 RNF123Q5XPI4 1314 aa8.96□□□□□ -0.98
ZEB1-217ENST00000559858 SMG6Q86US8 1419 aaKnown RBP8.95□□□□□ -0.98
ZEB1-217ENST00000559858 ARHGAP35Q9NRY4 1499 aa8.95□□□□□ -0.98
ZEB1-217ENST00000559858 GSE1Q14687 1217 aa8.95□□□□□ -0.98
ZEB1-217ENST00000559858 PKNOX2Q96KN3 472 aa8.95□□□□□ -0.98
ZEB1-217ENST00000559858 MRS2Q9HD23 443 aa8.94□□□□□ -0.98
ZEB1-217ENST00000559858 TIAM1Q13009 1591 aa8.94□□□□□ -0.98
ZEB1-217ENST00000559858 CNTLNQ9NXG0 1405 aa8.93□□□□□ -0.98
ZEB1-217ENST00000559858 PRKRIP1Q9H875 184 aaPredicted RBP8.93□□□□□ -0.98
ZEB1-217ENST00000559858 TOP2BQ02880 1626 aa8.93□□□□□ -0.98
ZEB1-217ENST00000559858 PEG3Q9GZU2 1588 aa8.93□□□□□ -0.98
ZEB1-217ENST00000559858 TCERG1O14776 1098 aaKnown RBP8.93□□□□□ -0.98
ZEB1-217ENST00000559858 NPM2Q86SE8 214 aaKnown RBP8.93□□□□□ -0.98
ZEB1-217ENST00000559858 PHLDB1Q86UU1 1377 aa8.92□□□□□ -0.98
ZEB1-217ENST00000559858 NCOA2Q15596 1464 aa8.92□□□□□ -0.98
ZEB1-217ENST00000559858 LRRC9Q6ZRR7 1453 aa8.92□□□□□ -0.98
ZEB1-217ENST00000559858 HSPA5P11021 654 aaKnown RBP8.92□□□□□ -0.98
ZEB1-217ENST00000559858 NUDCQ9Y266 331 aa8.92□□□□□ -0.98
ZEB1-217ENST00000559858 AKNAQ7Z591 1439 aa8.91□□□□□ -0.98
ZEB1-217ENST00000559858 PDE4AP27815 886 aa8.9□□□□□ -0.98
ZEB1-217ENST00000559858 GLIPR1L2Q4G1C9 344 aa8.9□□□□□ -0.98
ZEB1-217ENST00000559858 FAM43AQ8N2R8 423 aa8.9□□□□□ -0.98
ZEB1-217ENST00000559858 MS4A1P11836 297 aa8.89□□□□□ -0.99
ZEB1-217ENST00000559858 EIF4G2P78344 907 aaKnown RBP eCLIP8.89□□□□□ -0.99
ZEB1-217ENST00000559858 DDRGK1Q96HY6 314 aa8.89□□□□□ -0.99
ZEB1-217ENST00000559858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.89□□□□□ -0.99
ZEB1-217ENST00000559858 BACH2Q9BYV9 841 aa8.89□□□□□ -0.99
ZEB1-217ENST00000559858 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
ZEB1-217ENST00000559858 UACAQ9BZF9 1416 aa8.88□□□□□ -0.99
ZEB1-217ENST00000559858 FRAT1Q92837 279 aaPredicted RBP8.87□□□□□ -0.99
ZEB1-217ENST00000559858 NFKBIBQ15653 356 aa8.87□□□□□ -0.99
ZEB1-217ENST00000559858 KDM5BQ9UGL1 1544 aa8.86□□□□□ -0.99
ZEB1-217ENST00000559858 KIF27Q86VH2 1401 aa8.86□□□□□ -0.99
ZEB1-217ENST00000559858 CCDC7Q96M83 1385 aa8.86□□□□□ -0.99
ZEB1-217ENST00000559858 CCDC18Q5T9S5 1454 aa8.85□□□□□ -0.99
ZEB1-217ENST00000559858 NCOA1Q15788 1441 aa8.84□□□□□ -0.99
ZEB1-217ENST00000559858 HFM1A2PYH4 1435 aa8.82□□□□□ -1
ZEB1-217ENST00000559858 DAXXQ9UER7 740 aaPredicted RBP8.82□□□□□ -1
ZEB1-217ENST00000559858 CFAP43Q8NDM7 1665 aa8.81□□□□□ -1
ZEB1-217ENST00000559858 RRP1P56182 461 aaKnown RBP8.8□□□□□ -1
ZEB1-217ENST00000559858 EXOC6Q8TAG9 804 aa8.8□□□□□ -1
ZEB1-217ENST00000559858 ZMYND15Q9H091 742 aa8.79□□□□□ -1
ZEB1-217ENST00000559858 PTPN23Q9H3S7 1636 aa8.79□□□□□ -1
ZEB1-217ENST00000559858 VSIG10Q8N0Z9 540 aa8.78□□□□□ -1
ZEB1-217ENST00000559858 FMN1Q68DA7 1419 aa8.77□□□□□ -1
ZEB1-217ENST00000559858 FGD6Q6ZV73 1430 aa8.77□□□□□ -1
ZEB1-217ENST00000559858 DCAF11Q8TEB1 546 aa8.77□□□□□ -1.01
ZEB1-217ENST00000559858 KIF7Q2M1P5 1343 aa8.77□□□□□ -1.01
ZEB1-217ENST00000559858 ABCA5Q8WWZ7 1642 aa8.77□□□□□ -1.01
ZEB1-217ENST00000559858 NAIPQ13075 1403 aa8.77□□□□□ -1.01
ZEB1-217ENST00000559858 AQRO60306 1485 aaKnown RBP eCLIP8.76□□□□□ -1.01
ZEB1-217ENST00000559858 ATP1B4Q9UN42 357 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-217ENST00000559858 ATAD2BQ9ULI0 1458 aa8.75□□□□□ -1.01
ZEB1-217ENST00000559858 PTPRKQ15262 1439 aa8.75□□□□□ -1.01
ZEB1-217ENST00000559858 PNISRQ8TF01 805 aaKnown RBP8.75□□□□□ -1.01
ZEB1-217ENST00000559858 RCAN3Q9UKA8 241 aa8.75□□□□□ -1.01
ZEB1-217ENST00000559858 UNC13AQ9UPW8 1703 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms